BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_A04
(896 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase... 143 9e-34
AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase... 143 9e-34
AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase... 143 9e-34
AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase... 143 9e-34
Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase p... 142 2e-33
BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein. 142 2e-33
AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase... 142 2e-33
AL139819-3|CAH72823.1| 242|Homo sapiens stearoyl-CoA desaturase... 142 2e-33
AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase... 142 2e-33
AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase pro... 141 3e-33
S70284-1|AAB30631.1| 237|Homo sapiens stearoyl-CoA desaturase p... 140 8e-33
AC073413-1|AAY40977.1| 256|Homo sapiens unknown protein. 126 1e-28
AK024685-1|BAB14961.1| 256|Homo sapiens protein ( Homo sapiens ... 118 2e-26
BC004936-1|AAH04936.1| 132|Homo sapiens SCD5 protein protein. 56 2e-07
>BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 143 bits (346), Expect = 9e-34
Identities = 71/143 (49%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 373 TSIFAIFLYLCSGLGIXAGAPXLWAHXSYKARLPLRXLLTIFNTIAFXDAVXDWARDHRI 552
T ++ +F Y S LGI AGA LW+H SYKARLPLR L I NT+AF + V +WARDHR
Sbjct: 100 TWLWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRA 159
Query: 553 HXKYSETDAXPHXATRGFFFSHIGWLLLRXHPXIXSPRAIPST*MICTXXLSYVFRTKYY 732
H K+SET A PH + RGFFFSH+GWLL+R HP + + + L +F+ +YY
Sbjct: 160 HHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEKL-VMFQRRYY 218
Query: 733 QILMPLXRFIXPTYVP-PLWGHT 798
+ + L FI PT VP WG T
Sbjct: 219 KPGLLLMCFILPTLVPWYFWGET 241
Score = 32.3 bits (70), Expect = 2.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 287 VWRNVILFFILHVGGVYG 340
VWRN+IL +LH+G +YG
Sbjct: 72 VWRNIILMSLLHLGALYG 89
>AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 143 bits (346), Expect = 9e-34
Identities = 71/143 (49%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 373 TSIFAIFLYLCSGLGIXAGAPXLWAHXSYKARLPLRXLLTIFNTIAFXDAVXDWARDHRI 552
T ++ +F Y S LGI AGA LW+H SYKARLPLR L I NT+AF + V +WARDHR
Sbjct: 100 TWLWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRA 159
Query: 553 HXKYSETDAXPHXATRGFFFSHIGWLLLRXHPXIXSPRAIPST*MICTXXLSYVFRTKYY 732
H K+SET A PH + RGFFFSH+GWLL+R HP + + + L +F+ +YY
Sbjct: 160 HHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEKL-VMFQRRYY 218
Query: 733 QILMPLXRFIXPTYVP-PLWGHT 798
+ + L FI PT VP WG T
Sbjct: 219 KPGLLLMCFILPTLVPWYFWGET 241
Score = 32.3 bits (70), Expect = 2.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 287 VWRNVILFFILHVGGVYG 340
VWRN+IL +LH+G +YG
Sbjct: 72 VWRNIILMSLLHLGALYG 89
>AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 366
Score = 143 bits (346), Expect = 9e-34
Identities = 71/143 (49%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 373 TSIFAIFLYLCSGLGIXAGAPXLWAHXSYKARLPLRXLLTIFNTIAFXDAVXDWARDHRI 552
T ++ +F Y S LGI AGA LW+H SYKARLPLR L I NT+AF + V +WARDHR
Sbjct: 107 TWLWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRA 166
Query: 553 HXKYSETDAXPHXATRGFFFSHIGWLLLRXHPXIXSPRAIPST*MICTXXLSYVFRTKYY 732
H K+SET A PH + RGFFFSH+GWLL+R HP + + + L +F+ +YY
Sbjct: 167 HHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEKL-VMFQRRYY 225
Query: 733 QILMPLXRFIXPTYVP-PLWGHT 798
+ + L FI PT VP WG T
Sbjct: 226 KPGLLLMCFILPTLVPWYFWGET 248
Score = 32.3 bits (70), Expect = 2.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 287 VWRNVILFFILHVGGVYG 340
VWRN+IL +LH+G +YG
Sbjct: 79 VWRNIILMSLLHLGALYG 96
>AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 143 bits (346), Expect = 9e-34
Identities = 71/143 (49%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 373 TSIFAIFLYLCSGLGIXAGAPXLWAHXSYKARLPLRXLLTIFNTIAFXDAVXDWARDHRI 552
T ++ +F Y S LGI AGA LW+H SYKARLPLR L I NT+AF + V +WARDHR
Sbjct: 100 TWLWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRA 159
Query: 553 HXKYSETDAXPHXATRGFFFSHIGWLLLRXHPXIXSPRAIPST*MICTXXLSYVFRTKYY 732
H K+SET A PH + RGFFFSH+GWLL+R HP + + + L +F+ +YY
Sbjct: 160 HHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEKL-VMFQRRYY 218
Query: 733 QILMPLXRFIXPTYVP-PLWGHT 798
+ + L FI PT VP WG T
Sbjct: 219 KPGLLLMCFILPTLVPWYFWGET 241
Score = 32.3 bits (70), Expect = 2.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 287 VWRNVILFFILHVGGVYG 340
VWRN+IL +LH+G +YG
Sbjct: 72 VWRNIILMSLLHLGALYG 89
>Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase
protein.
Length = 359
Score = 142 bits (344), Expect = 2e-33
Identities = 70/143 (48%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 373 TSIFAIFLYLCSGLGIXAGAPXLWAHXSYKARLPLRXLLTIFNTIAFXDAVXDWARDHRI 552
T ++ +F Y S LGI AGA LW+H SYKARLPLR L I NT+AF + V +WARDHR
Sbjct: 100 TWLWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRA 159
Query: 553 HXKYSETDAXPHXATRGFFFSHIGWLLLRXHPXIXSPRAIPST*MICTXXLSYVFRTKYY 732
H K+SET A PH + RGFFFSH+GWLL+R HP + + + L +F+ +YY
Sbjct: 160 HHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEKL-VMFQRRYY 218
Query: 733 QILMPLXRFIXPTYVP-PLWGHT 798
+ + + FI PT VP WG T
Sbjct: 219 KPGLLMMCFILPTLVPWYFWGET 241
Score = 32.3 bits (70), Expect = 2.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 287 VWRNVILFFILHVGGVYG 340
VWRN+IL +LH+G +YG
Sbjct: 72 VWRNIILMSLLHLGALYG 89
>BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein.
Length = 355
Score = 142 bits (344), Expect = 2e-33
Identities = 70/143 (48%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 373 TSIFAIFLYLCSGLGIXAGAPXLWAHXSYKARLPLRXLLTIFNTIAFXDAVXDWARDHRI 552
T ++ +F Y S LGI AGA LW+H SYKARLPLR L I NT+AF + V +WARDHR
Sbjct: 100 TWLWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRA 159
Query: 553 HXKYSETDAXPHXATRGFFFSHIGWLLLRXHPXIXSPRAIPST*MICTXXLSYVFRTKYY 732
H K+SET A PH + RGFFFSH+GWLL+R HP + + + L +F+ +YY
Sbjct: 160 HHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEKL-VMFQRRYY 218
Query: 733 QILMPLXRFIXPTYVP-PLWGHT 798
+ + + FI PT VP WG T
Sbjct: 219 KPGLLMMCFILPTLVPWYFWGET 241
Score = 32.3 bits (70), Expect = 2.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 287 VWRNVILFFILHVGGVYG 340
VWRN+IL +LH+G +YG
Sbjct: 72 VWRNIILMSLLHLGALYG 89
>AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 142 bits (344), Expect = 2e-33
Identities = 70/143 (48%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 373 TSIFAIFLYLCSGLGIXAGAPXLWAHXSYKARLPLRXLLTIFNTIAFXDAVXDWARDHRI 552
T ++ +F Y S LGI AGA LW+H SYKARLPLR L I NT+AF + V +WARDHR
Sbjct: 100 TWLWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRA 159
Query: 553 HXKYSETDAXPHXATRGFFFSHIGWLLLRXHPXIXSPRAIPST*MICTXXLSYVFRTKYY 732
H K+SET A PH + RGFFFSH+GWLL+R HP + + + L +F+ +YY
Sbjct: 160 HHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEKL-VMFQRRYY 218
Query: 733 QILMPLXRFIXPTYVP-PLWGHT 798
+ + + FI PT VP WG T
Sbjct: 219 KPGLLMMCFILPTLVPWYFWGET 241
Score = 32.3 bits (70), Expect = 2.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 287 VWRNVILFFILHVGGVYG 340
VWRN+IL +LH+G +YG
Sbjct: 72 VWRNIILMSLLHLGALYG 89
>AL139819-3|CAH72823.1| 242|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 242
Score = 142 bits (344), Expect = 2e-33
Identities = 70/143 (48%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 373 TSIFAIFLYLCSGLGIXAGAPXLWAHXSYKARLPLRXLLTIFNTIAFXDAVXDWARDHRI 552
T ++ +F Y S LGI AGA LW+H SYKARLPLR L I NT+AF + V +WARDHR
Sbjct: 100 TWLWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRA 159
Query: 553 HXKYSETDAXPHXATRGFFFSHIGWLLLRXHPXIXSPRAIPST*MICTXXLSYVFRTKYY 732
H K+SET A PH + RGFFFSH+GWLL+R HP + + + L +F+ +YY
Sbjct: 160 HHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEKL-VMFQRRYY 218
Query: 733 QILMPLXRFIXPTYVP-PLWGHT 798
+ + + FI PT VP WG T
Sbjct: 219 KPGLLMMCFILPTLVPWYFWGET 241
Score = 32.3 bits (70), Expect = 2.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 287 VWRNVILFFILHVGGVYG 340
VWRN+IL +LH+G +YG
Sbjct: 72 VWRNIILMSLLHLGALYG 89
>AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 359
Score = 142 bits (344), Expect = 2e-33
Identities = 70/143 (48%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 373 TSIFAIFLYLCSGLGIXAGAPXLWAHXSYKARLPLRXLLTIFNTIAFXDAVXDWARDHRI 552
T ++ +F Y S LGI AGA LW+H SYKARLPLR L I NT+AF + V +WARDHR
Sbjct: 100 TWLWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRA 159
Query: 553 HXKYSETDAXPHXATRGFFFSHIGWLLLRXHPXIXSPRAIPST*MICTXXLSYVFRTKYY 732
H K+SET A PH + RGFFFSH+GWLL+R HP + + + L +F+ +YY
Sbjct: 160 HHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEKL-VMFQRRYY 218
Query: 733 QILMPLXRFIXPTYVP-PLWGHT 798
+ + + FI PT VP WG T
Sbjct: 219 KPGLLMMCFILPTLVPWYFWGET 241
Score = 32.3 bits (70), Expect = 2.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 287 VWRNVILFFILHVGGVYG 340
VWRN+IL +LH+G +YG
Sbjct: 72 VWRNIILMSLLHLGALYG 89
>AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase
protein.
Length = 330
Score = 141 bits (342), Expect = 3e-33
Identities = 68/154 (44%), Positives = 97/154 (62%), Gaps = 2/154 (1%)
Frame = +1
Query: 373 TSIFAIFLYLCSGLGIXAGAPXLWAHXSYKARLPLRXLLTIFNTIAFXDAVXDWARDHRI 552
T ++A F +L + LG+ AGA LW+H SY+A+LPLR L + N++AF + + + +RDHR
Sbjct: 74 TLLWAYFCFLLAALGVTAGAHRLWSHRSYRAKLPLRIFLAVANSMAFQNDIFERSRDHRA 133
Query: 553 HXKYSETDAXPHXATRGFFFSHIGWLLLRXH-PXIXSPRAIPST*MICTXXLSYVFRTKY 729
H KYSETDA PH A RGFFFSHIGWL +R H I R + T ++ + + KY
Sbjct: 134 HHKYSETDADPHNARRGFFFSHIGWLFVRKHRDVIEKGRKLDVTDLLADPVVR--IQRKY 191
Query: 730 YQILMPLXRFIXPTYVP-PLWGHTVWXPFXVCXI 828
Y+I + L F+ PT VP +WG ++W + + I
Sbjct: 192 YKISVVLMCFVVPTLVPWYIWGESLWNSYFLASI 225
Score = 36.7 bits (81), Expect = 0.11
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 257 PSAEKRPWKIVWRNVILFFILHVGGVYGGYLFLFKPCGGLLYSPYFC 397
P A + IVWRNV+L +LH+G VY L LL++ YFC
Sbjct: 36 PGARGQRQNIVWRNVVLMSLLHLGAVYSLVLIPKAKPLTLLWA-YFC 81
>S70284-1|AAB30631.1| 237|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 237
Score = 140 bits (338), Expect = 8e-33
Identities = 69/141 (48%), Positives = 89/141 (63%), Gaps = 1/141 (0%)
Frame = +1
Query: 373 TSIFAIFLYLCSGLGIXAGAPXLWAHXSYKARLPLRXLLTIFNTIAFXDAVXDWARDHRI 552
T ++ +F Y S LGI AGA LW+H SYKARLPLR L I NT+AF + V +WARDHR
Sbjct: 98 TWLWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRA 157
Query: 553 HXKYSETDAXPHXATRGFFFSHIGWLLLRXHPXIXSPRAIPST*MICTXXLSYVFRTKYY 732
H K+SET A PH + RGFFFSH+GWLL+R HP + + + L +F+ +YY
Sbjct: 158 HHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEKL-VMFQRRYY 216
Query: 733 QILMPLXRFIXPTYVP-PLWG 792
+ + + FI PT VP WG
Sbjct: 217 KPGLLMMCFILPTLVPWYCWG 237
Score = 32.3 bits (70), Expect = 2.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 287 VWRNVILFFILHVGGVYG 340
VWRN+IL +LH+G +YG
Sbjct: 70 VWRNIILMSLLHLGALYG 87
>AC073413-1|AAY40977.1| 256|Homo sapiens unknown protein.
Length = 256
Score = 126 bits (303), Expect = 1e-28
Identities = 52/91 (57%), Positives = 68/91 (74%)
Frame = +1
Query: 373 TSIFAIFLYLCSGLGIXAGAPXLWAHXSYKARLPLRXLLTIFNTIAFXDAVXDWARDHRI 552
T ++A F +L + LG+ AGA LW+H SY+A+LPLR L + N++AF + + +W+RDHR
Sbjct: 74 TLLWAYFCFLLAALGVTAGAHRLWSHRSYRAKLPLRIFLAVANSMAFQNDIFEWSRDHRA 133
Query: 553 HXKYSETDAXPHXATRGFFFSHIGWLLLRXH 645
H KYSETDA PH A RGFFFSHIGWL +R H
Sbjct: 134 HHKYSETDADPHNARRGFFFSHIGWLFVRKH 164
Score = 36.7 bits (81), Expect = 0.11
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 257 PSAEKRPWKIVWRNVILFFILHVGGVYGGYLFLFKPCGGLLYSPYFC 397
P A + IVWRNV+L +LH+G VY L LL++ YFC
Sbjct: 36 PGARGQRQNIVWRNVVLMSLLHLGAVYSLVLIPKAKPLTLLWA-YFC 81
>AK024685-1|BAB14961.1| 256|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21032 fis, clone CAE07365. ).
Length = 256
Score = 118 bits (285), Expect = 2e-26
Identities = 51/91 (56%), Positives = 66/91 (72%)
Frame = +1
Query: 373 TSIFAIFLYLCSGLGIXAGAPXLWAHXSYKARLPLRXLLTIFNTIAFXDAVXDWARDHRI 552
T ++A F L + LG+ AGA LW+H SY+A+LPLR L + N++AF + + + +RDHR
Sbjct: 74 TLLWAYFCLLLAALGVTAGAHRLWSHRSYRAKLPLRIFLAVANSMAFQNDIFERSRDHRA 133
Query: 553 HXKYSETDAXPHXATRGFFFSHIGWLLLRXH 645
H KYSETDA PH A RGFFFSHIGWL +R H
Sbjct: 134 HHKYSETDADPHNARRGFFFSHIGWLFVRKH 164
Score = 36.7 bits (81), Expect = 0.11
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 257 PSAEKRPWKIVWRNVILFFILHVGGVYGGYLFLFKPCGGLLYSPYFC 397
P A + IVWRNV+L +LH+G VY L LL++ YFC
Sbjct: 36 PGARGQRQNIVWRNVVLMSLLHLGAVYSLVLIPKAKPLTLLWA-YFC 81
>BC004936-1|AAH04936.1| 132|Homo sapiens SCD5 protein protein.
Length = 132
Score = 56.0 bits (129), Expect = 2e-07
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = +1
Query: 373 TSIFAIFLYLCSGLGIXAGAPXLWAHXSYKARLPLRXLLTIFNTIAFXDA 522
T ++A F +L + LG+ AGA LW+H SY+A+LPLR L + N++AF A
Sbjct: 74 TLLWAYFCFLLAALGVTAGAHRLWSHRSYRAKLPLRIFLAVANSMAFQAA 123
Score = 36.7 bits (81), Expect = 0.11
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 257 PSAEKRPWKIVWRNVILFFILHVGGVYGGYLFLFKPCGGLLYSPYFC 397
P A + IVWRNV+L +LH+G VY L LL++ YFC
Sbjct: 36 PGARGQRQNIVWRNVVLMSLLHLGAVYSLVLIPKAKPLTLLWA-YFC 81
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,285,844
Number of Sequences: 237096
Number of extensions: 2938532
Number of successful extensions: 9450
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9435
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -