Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_A02
         (923 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029953-1|ABM92827.1|  104|Drosophila melanogaster IP17351p pro...    69   7e-12
BT024261-1|ABC86323.1|  121|Drosophila melanogaster IP15820p pro...    69   7e-12
AE014134-1388|AAF52596.2|  104|Drosophila melanogaster CG7424-PA...    69   7e-12

>BT029953-1|ABM92827.1|  104|Drosophila melanogaster IP17351p
           protein.
          Length = 104

 Score = 69.3 bits (162), Expect = 7e-12
 Identities = 29/51 (56%), Positives = 36/51 (70%)
 Frame = +2

Query: 227 PSSKRRQKPLRKLCSVLECADCXVRSQVALKRCKHFELGGDXKRKGQMIQF 379
           P  +++ K  +K+   +EC +C  R Q  LKRCKHFELGGD KRKGQMIQF
Sbjct: 54  PIFRKKAKTTKKIVLRMECTECKYRKQTPLKRCKHFELGGDKKRKGQMIQF 104



 Score = 52.0 bits (119), Expect = 1e-06
 Identities = 28/51 (54%), Positives = 33/51 (64%)
 Frame = +1

Query: 121 KYTRYHSTKSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLR 273
           K T+Y  +K  RKG   + RRRYDRKQQG+GGQ+KPIF         IVLR
Sbjct: 22  KVTQYKKSKE-RKGA--QGRRRYDRKQQGFGGQTKPIFRKKAKTTKKIVLR 69



 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 21/37 (56%), Positives = 23/37 (62%)
 Frame = +3

Query: 66  MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 176
           MVNVPKQRRT+            +QYKKSKER  AQG
Sbjct: 1   MVNVPKQRRTFCKKCKVHKLHKVTQYKKSKERKGAQG 37


>BT024261-1|ABC86323.1|  121|Drosophila melanogaster IP15820p
           protein.
          Length = 121

 Score = 69.3 bits (162), Expect = 7e-12
 Identities = 29/51 (56%), Positives = 36/51 (70%)
 Frame = +2

Query: 227 PSSKRRQKPLRKLCSVLECADCXVRSQVALKRCKHFELGGDXKRKGQMIQF 379
           P  +++ K  +K+   +EC +C  R Q  LKRCKHFELGGD KRKGQMIQF
Sbjct: 71  PIFRKKAKTTKKIVLRMECTECKYRKQTPLKRCKHFELGGDKKRKGQMIQF 121



 Score = 52.0 bits (119), Expect = 1e-06
 Identities = 28/51 (54%), Positives = 33/51 (64%)
 Frame = +1

Query: 121 KYTRYHSTKSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLR 273
           K T+Y  +K  RKG   + RRRYDRKQQG+GGQ+KPIF         IVLR
Sbjct: 39  KVTQYKKSKE-RKGA--QGRRRYDRKQQGFGGQTKPIFRKKAKTTKKIVLR 86


>AE014134-1388|AAF52596.2|  104|Drosophila melanogaster CG7424-PA
           protein.
          Length = 104

 Score = 69.3 bits (162), Expect = 7e-12
 Identities = 29/51 (56%), Positives = 36/51 (70%)
 Frame = +2

Query: 227 PSSKRRQKPLRKLCSVLECADCXVRSQVALKRCKHFELGGDXKRKGQMIQF 379
           P  +++ K  +K+   +EC +C  R Q  LKRCKHFELGGD KRKGQMIQF
Sbjct: 54  PIFRKKAKTTKKIVLRMECTECKYRKQTPLKRCKHFELGGDKKRKGQMIQF 104



 Score = 52.0 bits (119), Expect = 1e-06
 Identities = 28/51 (54%), Positives = 33/51 (64%)
 Frame = +1

Query: 121 KYTRYHSTKSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLR 273
           K T+Y  +K  RKG   + RRRYDRKQQG+GGQ+KPIF         IVLR
Sbjct: 22  KVTQYKKSKE-RKGA--QGRRRYDRKQQGFGGQTKPIFRKKAKTTKKIVLR 69



 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 21/37 (56%), Positives = 23/37 (62%)
 Frame = +3

Query: 66  MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 176
           MVNVPKQRRT+            +QYKKSKER  AQG
Sbjct: 1   MVNVPKQRRTFCKKCKVHKLHKVTQYKKSKERKGAQG 37


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,914,161
Number of Sequences: 53049
Number of extensions: 399260
Number of successful extensions: 822
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4546383066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)