Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_P24
         (918 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40419-1|AAA81422.1|  283|Caenorhabditis elegans Hypothetical pr...    33   0.29 
AF067607-8|AAF98614.1|  144|Caenorhabditis elegans Hypothetical ...    30   2.0  
AF025471-10|AAB71059.1|  326|Caenorhabditis elegans Hypothetical...    29   4.7  
U00044-7|AAA50675.1|  990|Caenorhabditis elegans Hypothetical pr...    29   6.2  
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p...    28   8.1  
AF101317-1|AAC69234.1|  330|Caenorhabditis elegans Seven tm rece...    28   8.1  
AC024859-4|AAK29983.4|  472|Caenorhabditis elegans Hypothetical ...    28   8.1  
AC006661-1|AAF39886.2|  168|Caenorhabditis elegans Hypothetical ...    28   8.1  

>U40419-1|AAA81422.1|  283|Caenorhabditis elegans Hypothetical
           protein C27F2.4 protein.
          Length = 283

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +3

Query: 279 VLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHA 383
           +LD  CGTG+ S ++++ G   V VD S  ML+ A
Sbjct: 57  LLDIGCGTGMSSEVILDAGHMFVGVDVSRPMLEIA 91


>AF067607-8|AAF98614.1|  144|Caenorhabditis elegans Hypothetical
           protein C18H7.9 protein.
          Length = 144

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +3

Query: 252 LLKNN-GCKTVLDAACGTGIDSMMLVNEGF-KVVSVDASDKMLKH 380
           LLK N   K VLD  CG G++S   +  G  KVV  D S +M+++
Sbjct: 31  LLKYNLKDKKVLDIGCGNGLNSTTFLQWGARKVVGFDNSQEMIEN 75


>AF025471-10|AAB71059.1|  326|Caenorhabditis elegans Hypothetical
           protein R52.1 protein.
          Length = 326

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
 Frame = -2

Query: 440 FNYPIIIFGVLSLLPASFESVLQHLVRSINRHHFKPFIHQHHGVYPSTTSGVQNSLAAVV 261
           F  P+ I      L    E  ++  ++ + ++  K  +  H     +T  G+ N+L    
Sbjct: 225 FTMPLPIQKCEEFLIEKSEKSVKEKLKLVKKYQLKS-LKTHCLSKINTPYGI-NALMPFD 282

Query: 260 LQETDQEVFVVLRSLITISDEL-VPCFCRFAVSVLIFYTLG 141
             + D EV + L      +DE  + C  RF V  LIF T+G
Sbjct: 283 HNDMDPEVVMALLKKSLATDEFYLDCIMRFTVICLIFITVG 323


>U00044-7|AAA50675.1|  990|Caenorhabditis elegans Hypothetical
           protein K04C2.2 protein.
          Length = 990

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +3

Query: 282 LDAACGTGIDSMMLVNEGFKVVSV 353
           +D ACGTG+ + +L N G K +SV
Sbjct: 355 VDKACGTGLTTALLSNLGKKQISV 378


>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
            protein C34D4.14 protein.
          Length = 2761

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = +3

Query: 108  QVFHSRSLGIPSEGVKDQYADGKAAKTWNKFIGDSNQRTQNYKDFLIGLLKNNGCKTVLD 287
            +V    SL   S   KD   + +A K   K      ++  +Y D L GL++N     +LD
Sbjct: 1919 EVITGESLSDASSSAKDATTN-EAQKKGGKKPKKWFKKMSSYTDVLKGLMQNRYPVALLD 1977

Query: 288  -AACGTGIDSMM 320
             AA G  +D MM
Sbjct: 1978 PAAAGIEMDEMM 1989


>AF101317-1|AAC69234.1|  330|Caenorhabditis elegans Seven tm
           receptor protein 16 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 449 VGFFNYPIIIFGVLSLLPASFESVLQHLVRSIN 351
           +G + Y II+F V  +  ASFE VL  ++ S N
Sbjct: 38  LGPYKYLIILFSVFGIAFASFEFVLYPVLHSYN 70


>AC024859-4|AAK29983.4|  472|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.11 protein.
          Length = 472

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = +3

Query: 249 GLLKNNGCKTVLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHALKARWEKRKNP 416
           G     G KTV+ A    G  S+ +V      ++ +A+DK++   L + W KRK+P
Sbjct: 320 GAFSQPGAKTVIPAKV-VGKFSLRIVPH----MTPEATDKLVNSYLDSLWAKRKSP 370


>AC006661-1|AAF39886.2|  168|Caenorhabditis elegans Hypothetical
           protein H20J04.6 protein.
          Length = 168

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 581 RHSFCILWSPYSSNKWAXEFPRHMTASN 498
           R+ +CI+W+P     W   F  HM  +N
Sbjct: 15  RYPYCIVWTPIPCLTWFFPFIGHMGIAN 42


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,533,841
Number of Sequences: 27780
Number of extensions: 413193
Number of successful extensions: 1255
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)