Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_P22
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1580 + 27888275-27888360,27888755-27888871,27888964-278890...    78   1e-14
07_03_1260 - 25260872-25261101,25261199-25261312,25261473-252615...    76   3e-14
03_04_0016 + 16461542-16461566,16462701-16462732,16463015-164631...    76   3e-14
01_06_1167 - 35062766-35062870,35063165-35063228,35063647-350637...    36   0.033
01_07_0025 + 40565296-40565497,40565591-40566075                       29   3.8  

>07_03_1580 +
           27888275-27888360,27888755-27888871,27888964-27889045,
           27889710-27889821,27889958-27890071,27890163-27890326
          Length = 224

 Score = 77.8 bits (183), Expect = 1e-14
 Identities = 35/57 (61%), Positives = 40/57 (70%)
 Frame = +1

Query: 484 ADXKSKKPXLIAKSSILXDVKPWDDETXMKXMXNQVRTIEMEGLLWGASKXVPVGYG 654
           A   S K     KSS+L DVKPWDDET MK +   VR+++MEGL WGASK VPVGYG
Sbjct: 123 ASKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYG 179



 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 21/50 (42%), Positives = 31/50 (62%)
 Frame = +3

Query: 147 LNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIAS 296
           L  L Q+L+ K+YVSG   S+ D++VF  V   P A  P+  RWY+ +A+
Sbjct: 14  LKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAEFPNAARWYDTVAA 63


>07_03_1260 -
           25260872-25261101,25261199-25261312,25261473-25261596,
           25261755-25261839,25261917-25262033,25262122-25262207
          Length = 251

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 36/60 (60%), Positives = 41/60 (68%)
 Frame = +1

Query: 475 KAYADXKSKKPXLIAKSSILXDVKPWDDETXMKXMXNQVRTIEMEGLLWGASKXVPVGYG 654
           +A A   S K     KSS+L DVKPWDDET M  +   VR ++MEGLLWGASK VPVGYG
Sbjct: 125 RAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVPVGYG 184



 Score = 44.8 bits (101), Expect = 9e-05
 Identities = 18/48 (37%), Positives = 29/48 (60%)
 Frame = +3

Query: 147 LNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQI 290
           L  L++YL  +SY+SGY  S  D+ V+     AP+++  +V RW+  I
Sbjct: 14  LKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTHI 61


>03_04_0016 +
           16461542-16461566,16462701-16462732,16463015-16463100,
           16463189-16463305,16463399-16463474,16463695-16463818,
           16464482-16464595,16464700-16464947
          Length = 273

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 36/60 (60%), Positives = 41/60 (68%)
 Frame = +1

Query: 475 KAYADXKSKKPXLIAKSSILXDVKPWDDETXMKXMXNQVRTIEMEGLLWGASKXVPVGYG 654
           +A A   S K     KSS+L DVKPWDDET M  +   VR ++MEGLLWGASK VPVGYG
Sbjct: 141 RAAAVKASGKKKESGKSSVLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLVPVGYG 200



 Score = 51.6 bits (118), Expect = 8e-07
 Identities = 22/50 (44%), Positives = 34/50 (68%)
 Frame = +3

Query: 147 LNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIAS 296
           L  L++YL  +SY+SGY  S+ D+ VF  +  APAA+  +V RWY+ I++
Sbjct: 33  LQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHISA 82


>01_06_1167 -
           35062766-35062870,35063165-35063228,35063647-35063738,
           35064137-35064205,35064322-35064412,35064509-35064732,
           35065064-35065180,35065583-35065651,35066172-35066237,
           35066335-35066505,35066581-35066661,35067620-35067700
          Length = 409

 Score = 36.3 bits (80), Expect = 0.033
 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 9/57 (15%)
 Frame = +3

Query: 147 LNDLNQYLAEKSYV--SGYTPSQADVQVFEQV-------GKAPAANLPHVLRWYNQI 290
           L +LNQ L++KS +  +G+ PS AD+ VF  +       G+      PHVLRW + I
Sbjct: 76  LGNLNQDLSQKSVLLGNGFKPSVADIVVFATIQVFVSHLGENELQKYPHVLRWMDYI 132


>01_07_0025 + 40565296-40565497,40565591-40566075
          Length = 228

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
 Frame = -1

Query: 381 CW----GGSRGFSTGGQWAGXPETKFCVQPECMKQ 289
           CW    GGSR    GG W    + K  V P C K+
Sbjct: 84  CWRRGGGGSRAGGGGGAWRASGKEKLVVAPRCGKR 118


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,946,224
Number of Sequences: 37544
Number of extensions: 322587
Number of successful extensions: 795
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)