Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_P22
(885 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical pr... 89 4e-18
Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical p... 85 8e-17
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p... 29 5.8
U28928-1|AAA68334.3| 589|Caenorhabditis elegans Anchor cell fus... 29 5.8
EF205023-1|ABP04049.1| 589|Caenorhabditis elegans anchor cell f... 29 5.8
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 28 7.7
>L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical
protein F54H12.6 protein.
Length = 213
Score = 89.0 bits (211), Expect = 4e-18
Identities = 41/82 (50%), Positives = 52/82 (63%)
Frame = +1
Query: 409 DLFGSGXXXXXXXXXXXXXXXLKAYADXKSKKPXLIAKSSILXDVKPWDDETXMKXMXNQ 588
DLFGS L AYA+ K+KK IAKSS++ DVKPWDDET + M
Sbjct: 89 DLFGSDDEEEDAEKAKIVEERLAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKL 148
Query: 589 VRTIEMEGLLWGASKXVPVGYG 654
VR+IEM+GL+WG +K +P+GYG
Sbjct: 149 VRSIEMDGLVWGGAKLIPIGYG 170
Score = 64.9 bits (151), Expect = 7e-11
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +3
Query: 138 PRXLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIASYTPAER 314
P L N LAE+++ +G+ S D Q+F +G AP A+ P+V RWY +ASYT AER
Sbjct: 8 PAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVASYTDAER 67
Query: 315 KTWS 326
KTW+
Sbjct: 68 KTWA 71
>Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical
protein Y41E3.10a protein.
Length = 263
Score = 84.6 bits (200), Expect = 8e-17
Identities = 40/82 (48%), Positives = 50/82 (60%)
Frame = +1
Query: 409 DLFGSGXXXXXXXXXXXXXXXLKAYADXKSKKPXLIAKSSILXDVKPWDDETXMKXMXNQ 588
DLFGS L AYA K+ K IAKSS++ DVKPWDDET + M
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKL 198
Query: 589 VRTIEMEGLLWGASKXVPVGYG 654
VR+IEM+GL+WG +K +P+GYG
Sbjct: 199 VRSIEMDGLVWGGAKLIPIGYG 220
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 309 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 172
QP CM + + VV+ PAP Q + Q +++C+QT+ Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171
>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical protein
M01F1.7 protein.
Length = 1034
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +3
Query: 153 DLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTPAERKTWSQG 332
D+ +Y E+ Y+ Y ++ D+Q N PH L ++N S P ++K+
Sbjct: 875 DVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEPLKQKSLHLR 934
Query: 333 H 335
H
Sbjct: 935 H 935
>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +3
Query: 153 DLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTPAERKTWSQG 332
D+ +Y E+ Y+ Y ++ D+Q N PH L ++N S P ++K+
Sbjct: 875 DVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEPLKQKSLHLR 934
Query: 333 H 335
H
Sbjct: 935 H 935
>U28928-1|AAA68334.3| 589|Caenorhabditis elegans Anchor cell fusion
failure protein1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +3
Query: 267 VLRW--YNQIASYTPAERKTWSQGHQP 341
+ +W Y + A TP + ++WS+GH P
Sbjct: 475 ICKWIPYEEKAMRTPRQEQSWSKGHSP 501
>EF205023-1|ABP04049.1| 589|Caenorhabditis elegans anchor cell
fusion failure-1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +3
Query: 267 VLRW--YNQIASYTPAERKTWSQGHQP 341
+ +W Y + A TP + ++WS+GH P
Sbjct: 475 ICKWIPYEEKAMRTPRQEQSWSKGHSP 501
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -1
Query: 309 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 172
QP CM + + VV+ PA Q + Q +++C+QT+ Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,586,024
Number of Sequences: 27780
Number of extensions: 256263
Number of successful extensions: 598
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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