Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_P17
(889 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 32 0.48
AC024817-35|AAP13745.1| 232|Caenorhabditis elegans Hypothetical... 30 1.9
AC024817-34|AAK68529.2| 249|Caenorhabditis elegans Hypothetical... 30 1.9
Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical p... 30 2.5
Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical p... 30 2.5
Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr... 30 2.5
U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical pr... 29 3.4
U40947-5|AAC48070.1| 505|Caenorhabditis elegans Inward rectifyi... 29 5.9
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical pr... 28 7.8
D49525-2|BAA08471.1| 567|Caenorhabditis elegans TPA-1B protein. 28 7.8
D49525-1|BAA08470.1| 704|Caenorhabditis elegans TPA-1A protein. 28 7.8
D14815-1|BAA03556.1| 557|Caenorhabditis elegans TPA-1 protein. 28 7.8
DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping... 28 7.8
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 28 7.8
AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical ... 28 7.8
AF078781-3|AAC26917.1| 567|Caenorhabditis elegans Tpa (tetradec... 28 7.8
AF078781-2|AAC26916.1| 704|Caenorhabditis elegans Tpa (tetradec... 28 7.8
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 32.3 bits (70), Expect = 0.48
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -1
Query: 250 VQIPSTSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVTEQPTPKTRNNY*FKPHFT-NTFY 74
V P T+S P P MP P+TTP T P P+ + Y +P F T
Sbjct: 112 VDKPETTSKPTPRPMP---TVFTFPYTTPH----FTTSTPVPEVTSTYDPRPRFRYTTTT 164
Query: 73 EDKRIKYDSNLK 38
E + IK+ K
Sbjct: 165 EPQIIKFVKTTK 176
>AC024817-35|AAP13745.1| 232|Caenorhabditis elegans Hypothetical
protein Y54G2A.5b protein.
Length = 232
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -1
Query: 271 RHATPDFVQIPSTSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVTEQPTP 125
R + P F+ P +S+PKP + R LP TPRR +V +Q P
Sbjct: 136 RKSIPGFMAAPKFASTPKPDGIRRSMVDGSLP--TPRRG-SLVKQQRAP 181
>AC024817-34|AAK68529.2| 249|Caenorhabditis elegans Hypothetical
protein Y54G2A.5a protein.
Length = 249
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -1
Query: 271 RHATPDFVQIPSTSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVTEQPTP 125
R + P F+ P +S+PKP + R LP TPRR +V +Q P
Sbjct: 136 RKSIPGFMAAPKFASTPKPDGIRRSMVDGSLP--TPRRG-SLVKQQRAP 181
>Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical
protein C53B4.4e protein.
Length = 1544
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 446 SACSLDAHDCRKFHLCSPPEXLPDGRXADHRAALCPRHYGYDPR 577
S C + + ++ + SPP+ PD D A RH GYDPR
Sbjct: 1118 SNCHREVYQLKQPNTSSPPQTSPD----DPMLAEFARHAGYDPR 1157
>Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical
protein C53B4.4d protein.
Length = 1301
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 446 SACSLDAHDCRKFHLCSPPEXLPDGRXADHRAALCPRHYGYDPR 577
S C + + ++ + SPP+ PD D A RH GYDPR
Sbjct: 838 SNCHREVYQLKQPNTSSPPQTSPD----DPMLAEFARHAGYDPR 877
>Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical
protein C53B4.4c protein.
Length = 1304
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 446 SACSLDAHDCRKFHLCSPPEXLPDGRXADHRAALCPRHYGYDPR 577
S C + + ++ + SPP+ PD D A RH GYDPR
Sbjct: 838 SNCHREVYQLKQPNTSSPPQTSPD----DPMLAEFARHAGYDPR 877
>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical protein
C53B4.4b protein.
Length = 1586
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 446 SACSLDAHDCRKFHLCSPPEXLPDGRXADHRAALCPRHYGYDPR 577
S C + + ++ + SPP+ PD D A RH GYDPR
Sbjct: 1120 SNCHREVYQLKQPNTSSPPQTSPD----DPMLAEFARHAGYDPR 1159
>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical protein
C53B4.4a protein.
Length = 1584
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 446 SACSLDAHDCRKFHLCSPPEXLPDGRXADHRAALCPRHYGYDPR 577
S C + + ++ + SPP+ PD D A RH GYDPR
Sbjct: 1118 SNCHREVYQLKQPNTSSPPQTSPD----DPMLAEFARHAGYDPR 1157
>U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical
protein ZK813.5 protein.
Length = 471
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 241 PSTSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVTEQPTPKTR 116
PS S +PKP G A +P PR+ + T++ KT+
Sbjct: 420 PSPSETPKPRAQDAGKARSSVPSKIPRQIPQFKTKRNNSKTK 461
>U40947-5|AAC48070.1| 505|Caenorhabditis elegans Inward rectifying
k (potassium)channel family protein 1 protein.
Length = 505
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +2
Query: 335 RAVHRTPLATPSWVAVPRSPYQSVTSRIKDSTTAVNRSACSLDAHDCRKFHLCSP 499
R+ TPL +PS + P +P S + N S + +A C LC P
Sbjct: 418 RSSDSTPLPSPSPYSYPSTPLNHFQSSSNSPVFSNNHSKFNTEAVTCEAGMLCPP 472
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -1
Query: 316 QPPGNATHMMACVQFRHATPDFVQIPSTSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVTE 137
+PP + ++A +Q D + PST S PK + R A + P + P E +
Sbjct: 33 EPPSSVQKLLASLQQAQNKSDLSEQPST-SKPKKNE-KRKKAVAQAPASAPAPGPEEKKK 90
Query: 136 QP 131
QP
Sbjct: 91 QP 92
>Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -1
Query: 316 QPPGNATHMMACVQFRHATPDFVQIPSTSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVTE 137
+PP + ++A +Q D + PST S PK + R A + P + P E +
Sbjct: 56 EPPSSVQKLLASLQQAQNKSDLSEQPST-SKPKKNE-KRKKAVAQAPASAPAPGPEEKKK 113
Query: 136 QP 131
QP
Sbjct: 114 QP 115
>D49525-2|BAA08471.1| 567|Caenorhabditis elegans TPA-1B protein.
Length = 567
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 358 CNALLGGCSKESVPECDVTNQRFHHSCEQV 447
C ++L G K+ + C+V N HH CE++
Sbjct: 117 CGSMLYGLFKQGL-RCEVCNVACHHKCERL 145
>D49525-1|BAA08470.1| 704|Caenorhabditis elegans TPA-1A protein.
Length = 704
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 358 CNALLGGCSKESVPECDVTNQRFHHSCEQV 447
C ++L G K+ + C+V N HH CE++
Sbjct: 254 CGSMLYGLFKQGL-RCEVCNVACHHKCERL 282
>D14815-1|BAA03556.1| 557|Caenorhabditis elegans TPA-1 protein.
Length = 557
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 358 CNALLGGCSKESVPECDVTNQRFHHSCEQV 447
C ++L G K+ + C+V N HH CE++
Sbjct: 107 CGSMLYGLFKQGL-RCEVCNVACHHKCERL 135
>DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping
protein protein.
Length = 770
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -1
Query: 316 QPPGNATHMMACVQFRHATPDFVQIPSTSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVTE 137
+PP + ++A +Q D + PST S PK + R A + P + P E +
Sbjct: 17 EPPSSVQKLLASLQQAQNKSDLSEQPST-SKPKKNE-KRKKAVAQAPASAPAPGPEEKKK 74
Query: 136 QP 131
QP
Sbjct: 75 QP 76
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -1
Query: 316 QPPGNATHMMACVQFRHATPDFVQIPSTSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVTE 137
+PP + ++A +Q D + PST S PK + R A + P + P E +
Sbjct: 33 EPPSSVQKLLASLQQAQNKSDLSEQPST-SKPKKNE-KRKKAVAQAPASAPAPGPEEKKK 90
Query: 136 QP 131
QP
Sbjct: 91 QP 92
>AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -1
Query: 316 QPPGNATHMMACVQFRHATPDFVQIPSTSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVTE 137
+PP + ++A +Q D + PST S PK + R A + P + P E +
Sbjct: 56 EPPSSVQKLLASLQQAQNKSDLSEQPST-SKPKKNE-KRKKAVAQAPASAPAPGPEEKKK 113
Query: 136 QP 131
QP
Sbjct: 114 QP 115
>AF078781-3|AAC26917.1| 567|Caenorhabditis elegans Tpa
(tetradecanoyl phorbol acetate)resistant protein 1,
isoform b protein.
Length = 567
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 358 CNALLGGCSKESVPECDVTNQRFHHSCEQV 447
C ++L G K+ + C+V N HH CE++
Sbjct: 117 CGSMLYGLFKQGL-RCEVCNVACHHKCERL 145
>AF078781-2|AAC26916.1| 704|Caenorhabditis elegans Tpa
(tetradecanoyl phorbol acetate)resistant protein 1,
isoform a protein.
Length = 704
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 358 CNALLGGCSKESVPECDVTNQRFHHSCEQV 447
C ++L G K+ + C+V N HH CE++
Sbjct: 254 CGSMLYGLFKQGL-RCEVCNVACHHKCERL 282
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,714,458
Number of Sequences: 27780
Number of extensions: 473865
Number of successful extensions: 1399
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1397
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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