Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_P14
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0056 + 7828453-7828717,7829425-7829427,7829658-7829912,782...    30   2.1  
05_02_0149 + 7107830-7108095,7109115-7109229,7109917-7110117           28   8.6  

>11_02_0056 +
           7828453-7828717,7829425-7829427,7829658-7829912,
           7829997-7830124,7831063-7831207,7832178-7832275,
           7833253-7833395,7835119-7835239,7835492-7835584,
           7835712-7835828
          Length = 455

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
 Frame = -3

Query: 650 GSGXGEVFSTLXKAASLILGSG*GPMLATVQTLLTPALNA*LEKSRLSNGLEDTTLGAFF 471
           G G GE FST   A  +   S     L++  + + P  +A L  S L  G ED  +    
Sbjct: 38  GDGDGEAFSTTTTAVRISASSPLRRALSSAASGILPGGSAHLLPSPLPLGEEDLNV---- 93

Query: 470 FSSTLAFLYLSTLSAYSNRTAYDNSQLS-CSFSVP 369
           +S    F +L+  ++ SN +A   +Q S  S SVP
Sbjct: 94  YSLRAGFSFLNFFTSASNWSAGFPTQNSFASASVP 128


>05_02_0149 + 7107830-7108095,7109115-7109229,7109917-7110117
          Length = 193

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 22/94 (23%), Positives = 44/94 (46%)
 Frame = -3

Query: 650 GSGXGEVFSTLXKAASLILGSG*GPMLATVQTLLTPALNA*LEKSRLSNGLEDTTLGAFF 471
           GS    V ++L KA S+ + +G   +   ++ +  P L+    +   +NG +      FF
Sbjct: 40  GSVHSVVSASLYKA-SMSISTGANQVSFGLELMTMPFLST--PRKLKNNGPKSNLSYTFF 96

Query: 470 FSSTLAFLYLSTLSAYSNRTAYDNSQLSCSFSVP 369
           F+ T  +    ++  Y+N+T +    ++ S  VP
Sbjct: 97  FAKTPLYKESMSIPPYANQTFFGLEWITMSLVVP 130


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,302,535
Number of Sequences: 37544
Number of extensions: 236975
Number of successful extensions: 527
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)