Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_P13
         (866 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical...    32   0.61 
Z81103-7|CAB03211.3|  579|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81103-5|CAD56592.2|  550|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81088-12|CAD56587.2|  579|Caenorhabditis elegans Hypothetical p...    29   3.3  
U40029-3|AAA81124.1|  269|Caenorhabditis elegans Hypothetical pr...    28   9.9  

>AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical
           protein F35F10.12 protein.
          Length = 471

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
 Frame = +1

Query: 169 DPDPFFAQPT-VGNGYEPIDNRPYIVNPPKDYN--PNGNGYEPIDNGAYYVDPPQGRPYF 339
           DP+   +QPT +G G  P    P  V PP  Y   P  +G    DNGA     P G PY 
Sbjct: 345 DPNLPPSQPTPIGGGVAPAGVAPAGVVPPPGYGFLPMTDG---TDNGAGDTPYPVGPPYP 401

Query: 340 KPTPFPGARG 369
              P P   G
Sbjct: 402 SDVPAPYPSG 411


>Z81103-7|CAB03211.3|  579|Caenorhabditis elegans Hypothetical
           protein M04G12.4a protein.
          Length = 579

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 190 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 288
           QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 91  QPLVGNSYDP----PVRFDPPYAYRATATGYMP 119


>Z81103-5|CAD56592.2|  550|Caenorhabditis elegans Hypothetical
           protein M04G12.4b protein.
          Length = 550

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 190 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 288
           QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 62  QPLVGNSYDP----PVRFDPPYAYRATATGYMP 90


>Z81088-12|CAD56587.2|  579|Caenorhabditis elegans Hypothetical
           protein M04G12.4a protein.
          Length = 579

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 190 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 288
           QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 91  QPLVGNSYDP----PVRFDPPYAYRATATGYMP 119


>U40029-3|AAA81124.1|  269|Caenorhabditis elegans Hypothetical
           protein F10G7.6 protein.
          Length = 269

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +1

Query: 214 EPIDNRPYI-VNPPKDYNPNGNGYEPIDNG 300
           EP D  P + V PP  + PN NG  P  NG
Sbjct: 239 EPDDPAPPLPVAPPPLHGPNNNGNGPAQNG 268


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,588,254
Number of Sequences: 27780
Number of extensions: 234426
Number of successful extensions: 627
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)