Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_P11
         (891 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0405 - 17767303-17767665,17767815-17768039,17768115-177683...   187   1e-47
06_01_0729 + 5367796-5368071,5368390-5368483,5368708-5368782,536...    38   0.008
02_04_0096 + 19669428-19669525,19670770-19670818,19671041-196711...    37   0.025
06_02_0079 - 11512747-11512770,11513281-11513321,11513409-115135...    33   0.40 
03_02_0801 + 11343227-11343885,11344018-11344087,11344362-113444...    29   5.0  
04_04_0835 + 28538032-28539006,28539113-28539203,28539291-285394...    29   6.6  
02_03_0395 - 18554596-18555090,18555194-18555566,18556026-18556168     28   8.7  

>07_03_0405 -
           17767303-17767665,17767815-17768039,17768115-17768342,
           17768607-17768621,17768622-17768810,17769106-17769213,
           17769917-17770045
          Length = 418

 Score =  187 bits (455), Expect = 1e-47
 Identities = 104/211 (49%), Positives = 129/211 (61%), Gaps = 8/211 (3%)
 Frame = +2

Query: 113 SLESIINNNLTGRDLEEFNRIHFGRR--NNLE-IKLKESSIXXXXXXXXXXXXXXFPAKD 283
           SL  ++ +NL+    +E +R+  G      LE I L E++               F A  
Sbjct: 28  SLHRLLQSNLSPELFKEASRLLLGLNCGRALEAISLPEATSALAKAHNFDVQAFRFDADK 87

Query: 284 EQTRPPRIVKVGVIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQ----- 448
           E  R PR+++VG+IQ+SIA+PT     +QKKAI  KVK +ID AG  GVNI+C Q     
Sbjct: 88  EYLRQPRVIRVGLIQNSIAIPTTSHFADQKKAIMEKVKPMIDAAGDAGVNILCLQVSQLS 147

Query: 449 ELWNMPFAFCTREKQPWCEFAESGEDGAXTTFLRELAIKYAMVIVSSILERDEKHSDILW 628
           E W MPFAFCTREK+ WCEFAE   DG  T FL++LA KY MVIVS ILERD  H +I+W
Sbjct: 148 EAWTMPFAFCTREKR-WCEFAEP-VDGESTQFLQQLAKKYNMVIVSPILERDVNHGEIVW 205

Query: 629 XXAVVISDTGXVIGKHRKNHIPRVGDLTNPT 721
             AVVI + G +IG HRKNHIPRVGD    T
Sbjct: 206 NTAVVIGNHGNIIGIHRKNHIPRVGDFNEST 236



 Score = 97.1 bits (231), Expect = 2e-20
 Identities = 40/56 (71%), Positives = 43/56 (76%)
 Frame = +1

Query: 706 FNESNYYMEGNTGHPVFATRYGXIAVNICFGRHHVLNWMMFGQXGXEXVFNPSXXI 873
           FNES YYMEGNTGHPVF T YG I VNIC+GRHH LNW+ FG  G E VFNPS  +
Sbjct: 232 FNESTYYMEGNTGHPVFETAYGKIGVNICYGRHHPLNWLAFGLNGAEIVFNPSATV 287


>06_01_0729 +
           5367796-5368071,5368390-5368483,5368708-5368782,
           5368919-5368997,5369155-5369170,5369260-5369346,
           5369451-5369533,5369616-5369769
          Length = 287

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
 Frame = +2

Query: 437 ICFQELWNMPFAFCTREKQPWCEFAESGEDGAXTTFLRELAIKYAMVIVSSILERDEKHS 616
           + FQE+WN P++  T       E  + G   +  + L E+A +  + IV   +   E+ S
Sbjct: 16  VLFQEIWNCPYSMETLPSHG--EDIDGGASPS-VSMLSEVAARRRITIVGGSI--PERSS 70

Query: 617 DILWXXAVVISDTGXVIGKHRKNHIPRV---GDLT 712
             L+    VI   G +  KHRK H+  +   GD+T
Sbjct: 71  GRLFNTCCVIGPDGQIKAKHRKLHLFEIDIPGDIT 105


>02_04_0096 +
           19669428-19669525,19670770-19670818,19671041-19671132,
           19671235-19671386,19671478-19671524,19671617-19671650,
           19671769-19671935,19672070-19672166,19672239-19672408
          Length = 301

 Score = 36.7 bits (81), Expect = 0.025
 Identities = 25/100 (25%), Positives = 51/100 (51%)
 Frame = +2

Query: 395 KKIIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESGEDGAXTTFLRELAIKYAM 574
           +++I  A ++G NI+  QEL+   + FC  ++  + + A+  +        ++LA +  +
Sbjct: 32  ERLIREAHKKGANIVLVQELFEGQY-FCQAQRLDFFQRAKPYKGNPTIIRFQKLAKELEV 90

Query: 575 VIVSSILERDEKHSDILWXXAVVISDTGXVIGKHRKNHIP 694
           VI  S  E   + ++  +    +I   G  +G +RK+HIP
Sbjct: 91  VIPVSFFE---EANNAHYNSVAIIDADGTDLGLYRKSHIP 127



 Score = 31.5 bits (68), Expect = 0.93
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 706 FNESNYYMEGNTGHPVFATRYGXIAVNICF 795
           + E  Y+  G+TG   F T+Y  I V IC+
Sbjct: 132 YQEKFYFNPGDTGFKAFKTKYATIGVGICW 161


>06_02_0079 -
           11512747-11512770,11513281-11513321,11513409-11513505,
           11513555-11513965,11514493-11514665,11514829-11516008
          Length = 641

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -1

Query: 834 LSEHHPVQDVVPSEADVHRDLAVSGRKYRMAGVTF-HVVVGFVKSPTLGIWFLRCFP 667
           L EH P++D   S+ D+  D  V   K R+  V    V    V+S T+ +W L C P
Sbjct: 234 LPEHIPIEDQNKSQRDIEADRCVRVSKERLRYVEITRVHNAPVESTTVVVWVLICGP 290


>03_02_0801 +
           11343227-11343885,11344018-11344087,11344362-11344433,
           11344511-11344980,11345626-11346598
          Length = 747

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -1

Query: 501 HHGCFSLVQNAKGIFHNSWKQMMLTPSWP--ATSMIFLTLLKIAFF 370
           H  C ++++ + G+  N W+ +   PS+P    SMI    L +  F
Sbjct: 649 HSSCRNVIERSFGVLKNKWRILFHLPSYPQQKQSMIICACLALHNF 694


>04_04_0835 +
           28538032-28539006,28539113-28539203,28539291-28539448,
           28539543-28539594,28539707-28539786,28539890-28539983,
           28540078-28540633,28541160-28541259,28541576-28541617,
           28542445-28542588
          Length = 763

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 528 PSSPDSANSHHGCFSLVQNAKGIFHNSWKQMMLTPSW 418
           PS+  S N     F L++N      NSW Q+++T  W
Sbjct: 628 PSTTASVNLDESQFKLLRNCFQGTSNSWGQVIVTAGW 664


>02_03_0395 - 18554596-18555090,18555194-18555566,18556026-18556168
          Length = 336

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 831 SEHHPVQDVVPSE-ADVHRDLAVSGRKYRMAGVTFHVVV 718
           +E HP+ DV+PSE  +V  D   + R   MAG   H +V
Sbjct: 282 AEVHPIDDVMPSEVVEVKVDDEETNRTDEMAGDGDHAMV 320


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,621,181
Number of Sequences: 37544
Number of extensions: 434572
Number of successful extensions: 1213
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)