Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_P11
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456375-1|CAG30261.1| 384|Homo sapiens Em:AP000355.2 protein. 205 1e-52
BC139843-1|AAI39844.2| 389|Homo sapiens UPB1 protein protein. 205 1e-52
BC131703-1|AAI31704.1| 384|Homo sapiens UPB1 protein protein. 205 1e-52
AF169559-1|AAF06739.1| 387|Homo sapiens beta-ureidopropionase p... 205 1e-52
AF163312-1|AAF06735.1| 384|Homo sapiens beta-ureidopropionase p... 205 1e-52
AB013885-1|BAA88634.1| 384|Homo sapiens beta-ureidopropionase p... 205 1e-52
U31468-1|AAC03241.1| 347|Homo sapiens homeobox protein protein. 32 3.2
CR457119-1|CAG33400.1| 304|Homo sapiens TREX1 protein. 31 4.2
BT020053-1|AAV38856.1| 304|Homo sapiens three prime repair exon... 31 4.2
BT020052-1|AAV38855.1| 304|Homo sapiens three prime repair exon... 31 4.2
BC103498-1|AAI03499.1| 885|Homo sapiens suppressor of variegati... 31 4.2
BC099714-1|AAH99714.1| 885|Homo sapiens suppressor of variegati... 31 4.2
BC087834-1|AAH87834.1| 393|Homo sapiens suppressor of variegati... 31 4.2
BC065287-1|AAH65287.1| 393|Homo sapiens suppressor of variegati... 31 4.2
BC023630-1|AAH23630.1| 369|Homo sapiens three prime repair exon... 31 4.2
BC002522-1|AAH02522.2| 393|Homo sapiens suppressor of variegati... 31 4.2
AJ243797-1|CAB50866.1| 304|Homo sapiens deoxyribonuclease III (... 31 4.2
AF483777-1|AAL82504.1| 304|Homo sapiens three prime repair exon... 31 4.2
AF319569-1|AAK07616.1| 314|Homo sapiens 3'-5' exonuclease TREX1... 31 4.2
AF319568-1|AAK07615.1| 369|Homo sapiens 3'-5' exonuclease TREX1... 31 4.2
AF319567-1|AAK07614.1| 314|Homo sapiens 3'-5' exonuclease TREX1... 31 4.2
AF319566-1|AAK07613.1| 314|Homo sapiens 3'-5' exonuclease TREX1... 31 4.2
AF151843-1|AAD34080.1| 384|Homo sapiens CGI-85 protein protein. 31 4.2
AF151105-1|AAD48774.2| 314|Homo sapiens 3'-5' exonuclease TREX1... 31 4.2
>CR456375-1|CAG30261.1| 384|Homo sapiens Em:AP000355.2 protein.
Length = 384
Score = 205 bits (501), Expect = 1e-52
Identities = 101/206 (49%), Positives = 130/206 (63%)
Frame = +2
Query: 104 ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 283
E SLE + +L DL+E R+ +G+ ++ L + F A +
Sbjct: 5 EWKSLEECLEKHLPLPDLQEVKRVLYGKELR-KLDLPREAFEAASREDFELQGYAFEAAE 63
Query: 284 EQTRPPRIVKVGVIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNM 463
EQ R PRIV VG++Q+ I +P + PV EQ A+ ++K I++VA GVNIICFQE W M
Sbjct: 64 EQLRRPRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTM 123
Query: 464 PFAFCTREKQPWCEFAESGEDGAXTTFLRELAIKYAMVIVSSILERDEKHSDILWXXAVV 643
PFAFCTREK PW EFAES EDG T F ++LA + MV+VS ILERD +H D+LW AVV
Sbjct: 124 PFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVVVSPILERDSEHGDVLWNTAVV 183
Query: 644 ISDTGXVIGKHRKNHIPRVGDLTNPT 721
IS++G V+GK RKNHIPRVGD T
Sbjct: 184 ISNSGAVLGKTRKNHIPRVGDFNEST 209
Score = 93.9 bits (223), Expect = 7e-19
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = +1
Query: 706 FNESNYYMEGNTGHPVFATRYGXIAVNICFGRHHVLNWMMFGQXGXEXVFNPSXXI 873
FNES YYMEGN GHPVF T++G IAVNIC+GRHH LNW+M+ G E +FNPS I
Sbjct: 205 FNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLNWLMYSINGAEIIFNPSATI 260
>BC139843-1|AAI39844.2| 389|Homo sapiens UPB1 protein protein.
Length = 389
Score = 205 bits (501), Expect = 1e-52
Identities = 101/206 (49%), Positives = 130/206 (63%)
Frame = +2
Query: 104 ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 283
E SLE + +L DL+E R+ +G+ ++ L + F A +
Sbjct: 5 EWKSLEECLEKHLPLPDLQEVKRVLYGKELR-KLDLPREAFEAASREDFELQGYAFEAAE 63
Query: 284 EQTRPPRIVKVGVIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNM 463
EQ R PRIV VG++Q+ I +P + PV EQ A+ ++K I++VA GVNIICFQE W M
Sbjct: 64 EQLRRPRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTM 123
Query: 464 PFAFCTREKQPWCEFAESGEDGAXTTFLRELAIKYAMVIVSSILERDEKHSDILWXXAVV 643
PFAFCTREK PW EFAES EDG T F ++LA + MV+VS ILERD +H D+LW AVV
Sbjct: 124 PFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVVVSPILERDSEHGDVLWNTAVV 183
Query: 644 ISDTGXVIGKHRKNHIPRVGDLTNPT 721
IS++G V+GK RKNHIPRVGD T
Sbjct: 184 ISNSGAVLGKTRKNHIPRVGDFNEST 209
Score = 93.9 bits (223), Expect = 7e-19
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = +1
Query: 706 FNESNYYMEGNTGHPVFATRYGXIAVNICFGRHHVLNWMMFGQXGXEXVFNPSXXI 873
FNES YYMEGN GHPVF T++G IAVNIC+GRHH LNW+M+ G E +FNPS I
Sbjct: 205 FNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLNWLMYSINGAEIIFNPSATI 260
>BC131703-1|AAI31704.1| 384|Homo sapiens UPB1 protein protein.
Length = 384
Score = 205 bits (501), Expect = 1e-52
Identities = 101/206 (49%), Positives = 130/206 (63%)
Frame = +2
Query: 104 ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 283
E SLE + +L DL+E R+ +G+ ++ L + F A +
Sbjct: 5 EWKSLEECLEKHLPLPDLQEVKRVLYGKELR-KLDLPREAFEAASREDFELQGYAFEAAE 63
Query: 284 EQTRPPRIVKVGVIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNM 463
EQ R PRIV VG++Q+ I +P + PV EQ A+ ++K I++VA GVNIICFQE W M
Sbjct: 64 EQLRRPRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTM 123
Query: 464 PFAFCTREKQPWCEFAESGEDGAXTTFLRELAIKYAMVIVSSILERDEKHSDILWXXAVV 643
PFAFCTREK PW EFAES EDG T F ++LA + MV+VS ILERD +H D+LW AVV
Sbjct: 124 PFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVVVSPILERDSEHGDVLWNTAVV 183
Query: 644 ISDTGXVIGKHRKNHIPRVGDLTNPT 721
IS++G V+GK RKNHIPRVGD T
Sbjct: 184 ISNSGAVLGKTRKNHIPRVGDFNEST 209
Score = 93.9 bits (223), Expect = 7e-19
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = +1
Query: 706 FNESNYYMEGNTGHPVFATRYGXIAVNICFGRHHVLNWMMFGQXGXEXVFNPSXXI 873
FNES YYMEGN GHPVF T++G IAVNIC+GRHH LNW+M+ G E +FNPS I
Sbjct: 205 FNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLNWLMYSINGAEIIFNPSATI 260
>AF169559-1|AAF06739.1| 387|Homo sapiens beta-ureidopropionase
protein.
Length = 387
Score = 205 bits (501), Expect = 1e-52
Identities = 101/206 (49%), Positives = 130/206 (63%)
Frame = +2
Query: 104 ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 283
E SLE + +L DL+E R+ +G+ ++ L + F A +
Sbjct: 5 EWKSLEECLEKHLPLPDLQEVKRVLYGKELR-KLDLPREAFEAASREDFELQGYAFEAAE 63
Query: 284 EQTRPPRIVKVGVIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNM 463
EQ R PRIV VG++Q+ I +P + PV EQ A+ ++K I++VA GVNIICFQE W M
Sbjct: 64 EQLRRPRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTM 123
Query: 464 PFAFCTREKQPWCEFAESGEDGAXTTFLRELAIKYAMVIVSSILERDEKHSDILWXXAVV 643
PFAFCTREK PW EFAES EDG T F ++LA + MV+VS ILERD +H D+LW AVV
Sbjct: 124 PFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVVVSPILERDSEHGDVLWNTAVV 183
Query: 644 ISDTGXVIGKHRKNHIPRVGDLTNPT 721
IS++G V+GK RKNHIPRVGD T
Sbjct: 184 ISNSGAVLGKTRKNHIPRVGDFNEST 209
Score = 93.9 bits (223), Expect = 7e-19
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = +1
Query: 706 FNESNYYMEGNTGHPVFATRYGXIAVNICFGRHHVLNWMMFGQXGXEXVFNPSXXI 873
FNES YYMEGN GHPVF T++G IAVNIC+GRHH LNW+M+ G E +FNPS I
Sbjct: 205 FNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLNWLMYSINGAEIIFNPSATI 260
>AF163312-1|AAF06735.1| 384|Homo sapiens beta-ureidopropionase
protein.
Length = 384
Score = 205 bits (501), Expect = 1e-52
Identities = 101/206 (49%), Positives = 130/206 (63%)
Frame = +2
Query: 104 ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 283
E SLE + +L DL+E R+ +G+ ++ L + F A +
Sbjct: 5 EWKSLEECLEKHLPLPDLQEVKRVLYGKELR-KLDLPREAFEAASREDFELQGYAFEAAE 63
Query: 284 EQTRPPRIVKVGVIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNM 463
EQ R PRIV VG++Q+ I +P + PV EQ A+ ++K I++VA GVNIICFQE W M
Sbjct: 64 EQLRRPRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTM 123
Query: 464 PFAFCTREKQPWCEFAESGEDGAXTTFLRELAIKYAMVIVSSILERDEKHSDILWXXAVV 643
PFAFCTREK PW EFAES EDG T F ++LA + MV+VS ILERD +H D+LW AVV
Sbjct: 124 PFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVVVSPILERDSEHGDVLWNTAVV 183
Query: 644 ISDTGXVIGKHRKNHIPRVGDLTNPT 721
IS++G V+GK RKNHIPRVGD T
Sbjct: 184 ISNSGAVLGKTRKNHIPRVGDFNEST 209
Score = 93.9 bits (223), Expect = 7e-19
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = +1
Query: 706 FNESNYYMEGNTGHPVFATRYGXIAVNICFGRHHVLNWMMFGQXGXEXVFNPSXXI 873
FNES YYMEGN GHPVF T++G IAVNIC+GRHH LNW+M+ G E +FNPS I
Sbjct: 205 FNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLNWLMYSINGAEIIFNPSATI 260
>AB013885-1|BAA88634.1| 384|Homo sapiens beta-ureidopropionase
protein.
Length = 384
Score = 205 bits (501), Expect = 1e-52
Identities = 101/206 (49%), Positives = 130/206 (63%)
Frame = +2
Query: 104 ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 283
E SLE + +L DL+E R+ +G+ ++ L + F A +
Sbjct: 5 EWKSLEECLEKHLPLPDLQEVKRVLYGKELR-KLDLPREAFEAASREDFELQGYAFEAAE 63
Query: 284 EQTRPPRIVKVGVIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNM 463
EQ R PRIV VG++Q+ I +P + PV EQ A+ ++K I++VA GVNIICFQE W M
Sbjct: 64 EQLRRPRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTM 123
Query: 464 PFAFCTREKQPWCEFAESGEDGAXTTFLRELAIKYAMVIVSSILERDEKHSDILWXXAVV 643
PFAFCTREK PW EFAES EDG T F ++LA + MV+VS ILERD +H D+LW AVV
Sbjct: 124 PFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVVVSPILERDSEHGDVLWNTAVV 183
Query: 644 ISDTGXVIGKHRKNHIPRVGDLTNPT 721
IS++G V+GK RKNHIPRVGD T
Sbjct: 184 ISNSGAVLGKTRKNHIPRVGDFNEST 209
Score = 93.9 bits (223), Expect = 7e-19
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = +1
Query: 706 FNESNYYMEGNTGHPVFATRYGXIAVNICFGRHHVLNWMMFGQXGXEXVFNPSXXI 873
FNES YYMEGN GHPVF T++G IAVNIC+GRHH LNW+M+ G E +FNPS I
Sbjct: 205 FNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLNWLMYSINGAEIIFNPSATI 260
>U31468-1|AAC03241.1| 347|Homo sapiens homeobox protein protein.
Length = 347
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/64 (35%), Positives = 30/64 (46%)
Frame = -2
Query: 629 SKVCPNASRPFLISRTRSPLRT*WRVPEGRSXSPRLHLIRQTRTTAASPLCRTRRAYSTT 450
S CP AS P RSPLR+ W P + SPR R+ + A+S R A ++T
Sbjct: 83 SPACPQASAPAWRRAWRSPLRS-W--PRSPAASPRRPSTRRRQRPASSRRSRCPAAVTST 139
Query: 449 LGNR 438
R
Sbjct: 140 RRRR 143
>CR457119-1|CAG33400.1| 304|Homo sapiens TREX1 protein.
Length = 304
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 440 CFQE-LWNMPFAFCTREKQPWCEFAESGEDGAXTTFLRELAI 562
CF + L N+ AF R+ QPWC A +G+ ELA+
Sbjct: 89 CFDDNLANLLLAFLRRQPQPWCLVAHNGDRYDFPLLQAELAM 130
>BT020053-1|AAV38856.1| 304|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 304
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 440 CFQE-LWNMPFAFCTREKQPWCEFAESGEDGAXTTFLRELAI 562
CF + L N+ AF R+ QPWC A +G+ ELA+
Sbjct: 89 CFDDNLANLLLAFLRRQPQPWCLVAHNGDRYDFPLLQAELAM 130
>BT020052-1|AAV38855.1| 304|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 304
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 440 CFQE-LWNMPFAFCTREKQPWCEFAESGEDGAXTTFLRELAI 562
CF + L N+ AF R+ QPWC A +G+ ELA+
Sbjct: 89 CFDDNLANLLLAFLRRQPQPWCLVAHNGDRYDFPLLQAELAM 130
>BC103498-1|AAI03499.1| 885|Homo sapiens suppressor of variegation
4-20 homolog 1, isoform 1 protein.
Length = 885
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 449 ELWNMPFAFCTREKQPWCEFAESGEDGAXTTFLREL 556
+LW P AF + +P C+F +G D A LR++
Sbjct: 262 QLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDI 297
>BC099714-1|AAH99714.1| 885|Homo sapiens suppressor of variegation
4-20 homolog 1 (Drosophila) protein.
Length = 885
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 449 ELWNMPFAFCTREKQPWCEFAESGEDGAXTTFLREL 556
+LW P AF + +P C+F +G D A LR++
Sbjct: 262 QLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDI 297
>BC087834-1|AAH87834.1| 393|Homo sapiens suppressor of variegation
4-20 homolog 1 (Drosophila) protein.
Length = 393
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 449 ELWNMPFAFCTREKQPWCEFAESGEDGAXTTFLREL 556
+LW P AF + +P C+F +G D A LR++
Sbjct: 262 QLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDI 297
>BC065287-1|AAH65287.1| 393|Homo sapiens suppressor of variegation
4-20 homolog 1 (Drosophila) protein.
Length = 393
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 449 ELWNMPFAFCTREKQPWCEFAESGEDGAXTTFLREL 556
+LW P AF + +P C+F +G D A LR++
Sbjct: 262 QLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDI 297
>BC023630-1|AAH23630.1| 369|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 369
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 440 CFQE-LWNMPFAFCTREKQPWCEFAESGEDGAXTTFLRELAI 562
CF + L N+ AF R+ QPWC A +G+ ELA+
Sbjct: 154 CFDDNLANLLLAFLRRQPQPWCLVAHNGDRYDFPLLQAELAM 195
>BC002522-1|AAH02522.2| 393|Homo sapiens suppressor of variegation
4-20 homolog 1 (Drosophila) protein.
Length = 393
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 449 ELWNMPFAFCTREKQPWCEFAESGEDGAXTTFLREL 556
+LW P AF + +P C+F +G D A LR++
Sbjct: 262 QLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDI 297
>AJ243797-1|CAB50866.1| 304|Homo sapiens deoxyribonuclease III
(DNase III) protein.
Length = 304
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 440 CFQE-LWNMPFAFCTREKQPWCEFAESGEDGAXTTFLRELAI 562
CF + L N+ AF R+ QPWC A +G+ ELA+
Sbjct: 89 CFDDNLANLLLAFLRRQPQPWCLVAHNGDRYDFPLLQAELAM 130
>AF483777-1|AAL82504.1| 304|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 304
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 440 CFQE-LWNMPFAFCTREKQPWCEFAESGEDGAXTTFLRELAI 562
CF + L N+ AF R+ QPWC A +G+ ELA+
Sbjct: 89 CFDDNLANLLLAFLRRQPQPWCLVAHNGDRYDFPLLQAELAM 130
>AF319569-1|AAK07616.1| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 440 CFQE-LWNMPFAFCTREKQPWCEFAESGEDGAXTTFLRELAI 562
CF + L N+ AF R+ QPWC A +G+ ELA+
Sbjct: 99 CFDDNLANLLLAFLRRQPQPWCLVAHNGDRYDFPLLQAELAM 140
>AF319568-1|AAK07615.1| 369|Homo sapiens 3'-5' exonuclease
TREX1-like protein protein.
Length = 369
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 440 CFQE-LWNMPFAFCTREKQPWCEFAESGEDGAXTTFLRELAI 562
CF + L N+ AF R+ QPWC A +G+ ELA+
Sbjct: 154 CFDDNLANLLLAFLRRQPQPWCLVAHNGDRYDFPLLQAELAM 195
>AF319567-1|AAK07614.1| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 440 CFQE-LWNMPFAFCTREKQPWCEFAESGEDGAXTTFLRELAI 562
CF + L N+ AF R+ QPWC A +G+ ELA+
Sbjct: 99 CFDDNLANLLLAFLRRQPQPWCLVAHNGDRYDFPLLQAELAM 140
>AF319566-1|AAK07613.1| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 440 CFQE-LWNMPFAFCTREKQPWCEFAESGEDGAXTTFLRELAI 562
CF + L N+ AF R+ QPWC A +G+ ELA+
Sbjct: 99 CFDDNLANLLLAFLRRQPQPWCLVAHNGDRYDFPLLQAELAM 140
>AF151843-1|AAD34080.1| 384|Homo sapiens CGI-85 protein protein.
Length = 384
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 449 ELWNMPFAFCTREKQPWCEFAESGEDGAXTTFLREL 556
+LW P AF + +P C+F +G D A LR++
Sbjct: 253 QLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDI 288
>AF151105-1|AAD48774.2| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 440 CFQE-LWNMPFAFCTREKQPWCEFAESGEDGAXTTFLRELAI 562
CF + L N+ AF R+ QPWC A +G+ ELA+
Sbjct: 99 CFDDNLANLLLAFLRRQPQPWCLVAHNGDRYDFPLLQAELAM 140
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,604,252
Number of Sequences: 237096
Number of extensions: 2310204
Number of successful extensions: 4837
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4831
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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