Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_P06
         (1049 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical pr...    30   3.2  
U97407-6|AAB52481.1|  751|Caenorhabditis elegans Tyrosinase prot...    29   7.3  
U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical pr...    29   7.3  
AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical...    29   7.3  
L23648-9|AAK95877.1|  466|Caenorhabditis elegans Prion-like-(q/n...    28   9.7  

>Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9b protein.
          Length = 625

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 13/20 (65%), Positives = 13/20 (65%)
 Frame = +1

Query: 628 PPHLPXAXPXAPPPTXPXPA 687
           PP LP A P  PPPT P PA
Sbjct: 412 PPQLPTA-PPQPPPTTPQPA 430


>U97407-6|AAB52481.1|  751|Caenorhabditis elegans Tyrosinase protein 4
            protein.
          Length = 751

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -1

Query: 1046 WGGXXXGAXXGXGGGXGXGGG 984
            WGG   G   G  GG G GGG
Sbjct: 707  WGGSRWGGGRGGWGGGGWGGG 727


>U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical protein
            C34D4.11 protein.
          Length = 136

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -1

Query: 1046 WGGXXXGAXXGXGGGXGXGGG 984
            WGG   G   G G G G GGG
Sbjct: 81   WGGNGGGGNGGGGRGGGGGGG 101


>AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical
            protein Y43F8C.20 protein.
          Length = 193

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -1

Query: 1046 WGGXXXGAXXGXGGGXGXGGG 984
            WGG   G   G GG  G GGG
Sbjct: 157  WGGNGGGGRGGGGGRGGGGGG 177


>L23648-9|AAK95877.1|  466|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 38
           protein.
          Length = 466

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 622 NXPPHLPXAXPXAPPPTXPXP 684
           N PP+ P   P  PPP  P P
Sbjct: 4   NQPPNYPPGNPNQPPPFPPTP 24


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,134,653
Number of Sequences: 27780
Number of extensions: 140747
Number of successful extensions: 965
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2793417546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)