Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_P03
         (716 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1136 + 24218601-24218734,24218769-24219906                       31   0.69 
01_03_0005 + 11568545-11569119,11569179-11569191                       31   0.69 
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329...    30   2.1  
05_06_0282 + 26915249-26915881                                         29   2.8  
01_01_0082 + 625198-625719                                             29   2.8  
07_01_0479 + 3606663-3607448                                           29   4.9  
02_05_0686 - 30900748-30902167,30903442-30904742                       28   6.4  
09_02_0495 + 9880714-9881196                                           28   8.5  

>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 31.5 bits (68), Expect = 0.69
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = +1

Query: 406 PPXGGXFXXLXGGGGXFXXXXGGGGPPP 489
           PP GG      GGGG      GGGG PP
Sbjct: 91  PPGGGGAPGPLGGGGARPPGGGGGGGPP 118



 Score = 31.1 bits (67), Expect = 0.91
 Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
 Frame = +1

Query: 403 PPPXGGXFXXLXGGGGXFXXXXGGGGPP--PP 492
           PP  GG    L GGG       GGGGPP  PP
Sbjct: 91  PPGGGGAPGPLGGGGARPPGGGGGGGPPSLPP 122


>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 31.5 bits (68), Expect = 0.69
 Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
 Frame = +1

Query: 403 PPPXGGXFXXLXGGGGXFXXXXGGGG----PPPP 492
           PPP GG      GGGG +    GGGG    PPPP
Sbjct: 114 PPPTGGG----GGGGGGWQQGGGGGGAYPTPPPP 143


>02_01_0458 +
           3291563-3291733,3292082-3292769,3292847-3293363,
           3293438-3293637,3294137-3294372,3294469-3295302
          Length = 881

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = +3

Query: 177 PPPRXGXFXXPXXKPPXEPPXXXXXKKGTPP 269
           PPP       P   PP  PP     KKG PP
Sbjct: 356 PPPPPPPPPPPPPPPPRPPPPPPPIKKGAPP 386


>05_06_0282 + 26915249-26915881
          Length = 210

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = +1

Query: 400 APPPXGGXFXXLXGGGGXFXXXXGGGGPPPP 492
           +P P G       GGGG       G GPPPP
Sbjct: 63  SPRPHGRVTPLADGGGGGVLRRPPGRGPPPP 93


>01_01_0082 + 625198-625719
          Length = 173

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/42 (30%), Positives = 16/42 (38%)
 Frame = +3

Query: 171 FYPPPRXGXFXXPXXKPPXEPPXXXXXKKGTPPXFXRGGGXP 296
           +YPPP    +  P   P   PP         PP +  GG  P
Sbjct: 64  YYPPPPPVYYPPPSPPPVAYPPPTTPSTNCPPPPYGGGGYNP 105


>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = -3

Query: 489 GGGXPPPXXXXKXPPPXXEXXKXPXXGGGXP 397
           GG  PPP    + PPP       P   GG P
Sbjct: 199 GGPPPPPGPFMRGPPPMGPPQVRPGMPGGPP 229


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
 Frame = +3

Query: 177 PPPRXGXFXXPXXK-PPXEPPXXXXXKKGTPPXFXRGGG 290
           PPP  G    P  K P   PP     KKG PP     GG
Sbjct: 347 PPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385



 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/40 (32%), Positives = 15/40 (37%)
 Frame = +3

Query: 177 PPPRXGXFXXPXXKPPXEPPXXXXXKKGTPPXFXRGGGXP 296
           PPP+      P   PP  PP         PP   + GG P
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPP 378


>09_02_0495 + 9880714-9881196
          Length = 160

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
 Frame = +1

Query: 403 PPPXGGXFXXLXGGG-GXFXXXXGGGGPPPP 492
           PPP G       GGG G      GG  PPPP
Sbjct: 53  PPPAGSSSSSSSGGGDGGAGGLFGGTYPPPP 83


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,974,171
Number of Sequences: 37544
Number of extensions: 257476
Number of successful extensions: 1127
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)