Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_P02
(936 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 35 0.096
U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-li... 34 0.17
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 33 0.22
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 33 0.22
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 33 0.29
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 33 0.29
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 33 0.29
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 33 0.29
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 33 0.29
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.39
AC024788-3|AAF60614.2| 98|Caenorhabditis elegans Caenacin (cae... 33 0.39
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 32 0.51
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 31 0.90
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 0.90
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 31 1.6
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 31 1.6
AL110484-17|CAB54408.1| 586|Caenorhabditis elegans Hypothetical... 31 1.6
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.1
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 4.8
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 4.8
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 4.8
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 29 6.3
U46753-7|AAA85763.2| 223|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 8.3
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 28 8.3
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 28 8.3
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 28 8.3
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 28 8.3
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 28 8.3
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 8.3
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 28 8.3
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 34.7 bits (76), Expect = 0.096
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 764 RGGGXXXGGWGGGXXXXGGWGXXAGAXG 681
RGGG G WGG G WG G G
Sbjct: 59 RGGGRGGGDWGGNNGGGGNWGGNGGGRG 86
Score = 34.7 bits (76), Expect = 0.096
Identities = 20/42 (47%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = -2
Query: 791 GG*GRXRIXRG--GGXXXGG---WGGGXXXXGGWGXXAGAXG 681
GG GR RG GG GG WGGG GGWG G G
Sbjct: 92 GGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGG 133
Score = 30.7 bits (66), Expect = 1.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 743 GGWGGGXXXXGGWG 702
GGWGGG GGWG
Sbjct: 23 GGWGGGPGRWGGWG 36
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GGG GGWG GGWG G G
Sbjct: 41 GGGGGPGGWGNN--GGGGWGRGGGRGG 65
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Frame = -2
Query: 761 GGGXXXGGWG----GGXXXXGGWGXXAGAXGSR 675
GG GGWG GG GGWG G R
Sbjct: 27 GGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGR 59
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GGG GGWGG GG G G G
Sbjct: 117 GGGNNDGGWGGNNGGGGG-GRGGGGRG 142
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -2
Query: 791 GG*GRXRIXRGGGXXXGGWGGGXXXXGGWGXXAGAXGSRAE 669
GG GR GG GG GGG GG G G G E
Sbjct: 142 GGDGRGPPGSNGGGDWGGNGGGGRGGGG-GRGGGGGGGAGE 181
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = -2
Query: 791 GG*GRXRIXRGGGXXX------GGWG-GGXXXXGGWGXXAGAXGS 678
GG G R GGG GGWG GG G WG G G+
Sbjct: 33 GGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGN 77
>U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-like
protein protein32 protein.
Length = 105
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 782 GRXRIXRGGGXXXGGWGGG-XXXXGGWGXXAGAXG 681
GR RGGG GG GGG GGWG G G
Sbjct: 60 GRGGWGRGGGRGYGGRGGGWGGRGGGWGRGGGGRG 94
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 936 RWXWGAGGXXGXGGXXGSWG 877
R WG GG G GG G WG
Sbjct: 61 RGGWGRGGGRGYGGRGGGWG 80
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 33.5 bits (73), Expect = 0.22
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -2
Query: 791 GG*GRXRIXRGGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GG G R GGG GG GGG GG G G G
Sbjct: 98 GGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRG 134
Score = 32.7 bits (71), Expect = 0.39
Identities = 25/84 (29%), Positives = 25/84 (29%)
Frame = -2
Query: 932 GXGGRGGXRGXGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXGG*GRXRIXRGGG 753
G GG G RG GG G GG G GGG
Sbjct: 49 GGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGG 108
Query: 752 XXXGGWGGGXXXXGGWGXXAGAXG 681
GG GGG GG G G G
Sbjct: 109 GGRGGGGGGGGGRGGGGGGRGGGG 132
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -2
Query: 791 GG*GRXRIXRGGGXXXGGWGGGXXXXGGWGXXAGAXGSR 675
GG G GGG GG GGG GG G G G R
Sbjct: 66 GGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGR 104
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 791 GG*GRXRIXRGGGXXXGGWGGGXXXXGGWGXXAGAXGSR 675
GG G GGG GG GGG GG G G R
Sbjct: 97 GGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRGR 135
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 764 RGGGXXXGGWGGGXXXXGGWGXXAGAXGSR 675
R GG GWGGG G G +G G R
Sbjct: 39 RSGGWGRPGWGGGGPGWGRGGGGSGWGGGR 68
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/82 (29%), Positives = 24/82 (29%)
Frame = -2
Query: 935 GGXGGRGGXRGXGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXGG*GRXRIXRGG 756
GG G GG RG G GG GR GG
Sbjct: 59 GGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRG----GG 114
Query: 755 GXXXGGWGGGXXXXGGWGXXAG 690
G GG GGG GG G G
Sbjct: 115 GGGGGGRGGGGGGRGGGGRGRG 136
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXGSRAEVXXXXVEXVGATHGMG 621
GGG GG+GGG GG G +G G + +G G G
Sbjct: 58 GGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGG 104
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GGG GG GGG GG G G G
Sbjct: 52 GGGGGGGGGGGGGGFGGGNGGFGGGGG 78
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXGS 678
GGG GG GGG G G G GS
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGGGGGGS 80
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -2
Query: 764 RGGGXXXGGWGGGXXXXGGWGXXAGA 687
+GGG GGWGG GGWG +GA
Sbjct: 310 QGGGG--GGWGGQGQQQGGWGGQSGA 333
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -2
Query: 764 RGGGXXXGGWGGGXXXXGGWGXXAGA 687
+GGG GGWGG GGWG +GA
Sbjct: 273 QGGGG--GGWGGQGQQQGGWGGQSGA 296
Score = 28.7 bits (61), Expect = 6.3
Identities = 25/91 (27%), Positives = 30/91 (32%), Gaps = 4/91 (4%)
Frame = -2
Query: 779 RXRIXRGG---GXXXGGWGGGXXXXGGWGXXAGAXGSRAEVXXXXVEXVGATHGMGAARS 609
R R RGG GG+ GG GGWG A G A G G G
Sbjct: 164 RDRETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGG----GGQGGYGGGNY 219
Query: 608 GPXXXHSXXXXXXGW-XXRRXSXSXGVGEKG 519
G GW ++ G G++G
Sbjct: 220 GGGWGQQGGGGQGGWGGPQQQQGGGGWGQQG 250
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -2
Query: 764 RGGGXXXGGWGGGXXXXGGWGXXAGA 687
+GGG GGWGG GGWG +GA
Sbjct: 272 QGGGG--GGWGGQGQQQGGWGGQSGA 295
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -2
Query: 764 RGGGXXXGGWGGGXXXXGGWGXXAGA 687
+GGG GGWGG GGWG +GA
Sbjct: 311 QGGGG--GGWGGQGQQQGGWGGQSGA 334
Score = 28.7 bits (61), Expect = 6.3
Identities = 25/91 (27%), Positives = 30/91 (32%), Gaps = 4/91 (4%)
Frame = -2
Query: 779 RXRIXRGG---GXXXGGWGGGXXXXGGWGXXAGAXGSRAEVXXXXVEXVGATHGMGAARS 609
R R RGG GG+ GG GGWG A G A G G G
Sbjct: 202 RDRETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGG----GGQGGYGGGNY 257
Query: 608 GPXXXHSXXXXXXGW-XXRRXSXSXGVGEKG 519
G GW ++ G G++G
Sbjct: 258 GGGWGQQGGGGQGGWGGPQQQQGGGGWGQQG 288
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -2
Query: 764 RGGGXXXGGWGGGXXXXGGWGXXAGA 687
+GGG GGWGG GGWG +GA
Sbjct: 310 QGGGG--GGWGGQGQQQGGWGGQSGA 333
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.7 bits (71), Expect = 0.39
Identities = 25/86 (29%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = -2
Query: 935 GGXGGRGGXRGXGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXGG*G-RXRIXRG 759
GG GG GG G GG GG G G
Sbjct: 77 GGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGG 136
Query: 758 GGXXXGGWGGGXXXXGGWGXXAGAXG 681
GG GG GGG GG G G G
Sbjct: 137 GGGGCGGGGGGGCGGGGGGCGGGGGG 162
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXGSRA 672
GGG GG GGG GG G G G A
Sbjct: 24 GGGGGGGGCGGGCGGGGGCGGGGGCGGGCA 53
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXGSR 675
GGG GG GGG GG G G G +
Sbjct: 165 GGGGGCGGGGGGGCGGGGGGGCGGGCGRK 193
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GGG GG GGG GG G G G
Sbjct: 67 GGGGGCGGGGGGCGGGGGCGGGGGGCG 93
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GGG GG GGG GG G G G
Sbjct: 158 GGGGGCGGGGGGCGGGGGGGCGGGGGG 184
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXGSRAE 669
GGG GG GGG GG G G + E
Sbjct: 166 GGGGCGGGGGGGCGGGGGGGCGGGCGRKKRE 196
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -2
Query: 791 GG*GRXRIXRGGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GG G GGG GG GGG GG G G G
Sbjct: 134 GGGGGGGCGGGGGGGCGG-GGGGCGGGGGGCGGGGGG 169
>AC024788-3|AAF60614.2| 98|Caenorhabditis elegans Caenacin
(caenorhabditis bacteriocin)protein 6 protein.
Length = 98
Score = 32.7 bits (71), Expect = 0.39
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -2
Query: 791 GG*GRXRIXRGGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GG G R GGG GWGGG GWG G G
Sbjct: 58 GGWGWGRPMWGGGWGRRGWGGGWGRR-GWGGYGGYGG 93
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 32.3 bits (70), Expect = 0.51
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWG 702
GGG GGWGGG GGWG
Sbjct: 713 GGGR--GGWGGGGWGGGGWG 730
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 31.5 bits (68), Expect = 0.90
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = -2
Query: 764 RGGGXXXGGWGGGXXXXGGWG 702
RGG GGWGGG GGWG
Sbjct: 240 RGGQQGPGGWGGG-GRGGGWG 259
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = -2
Query: 761 GGGXXXGGWGG--GXXXXGGWGXXAG 690
G G GGWGG G GGWG G
Sbjct: 85 GSGSGSGGWGGQDGGSSAGGWGGSQG 110
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = -2
Query: 764 RGGGXXXGGWGGG--XXXXGGWGXXAG 690
RGG GGWGG GGWG G
Sbjct: 161 RGGSGGQGGWGGSQDGGSQGGWGGQNG 187
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 764 RGGGXXXGGWGGGXXXXGGWGXXAGAXG 681
+GG GGWGG G G G+ G
Sbjct: 139 QGGNSNAGGWGGSQGGQNGGGGRGGSGG 166
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -2
Query: 791 GG*GRXRIXRGGGXXXGGWGGGXXXXGGWGXXAGAXGSR 675
GG G RGGG G G G GG G +G G +
Sbjct: 58 GGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQ 96
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.5 bits (68), Expect = 0.90
Identities = 29/111 (26%), Positives = 33/111 (29%), Gaps = 1/111 (0%)
Frame = -2
Query: 935 GGXGGRGGXRGXGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXGG*GRXRIXR-G 759
GG GG G G GG GG G + G
Sbjct: 138 GGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYG 197
Query: 758 GGXXXGGWGGGXXXXGGWGXXAGAXGSRAEVXXXXVEXVGATHGMGAARSG 606
GG GG+GGG GG+G G G G +GMG G
Sbjct: 198 GGMGGGGYGGGGMGGGGYG-GGGDGGYGPSGGYGGGYGPGGGYGMGGGGGG 247
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAG 690
GGG GG+GGG GG+G G
Sbjct: 111 GGGYGGGGYGGGGDGGGGYGGYGG 134
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/87 (28%), Positives = 27/87 (31%), Gaps = 2/87 (2%)
Frame = -2
Query: 935 GGXGGRGGXRGXGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXGG*GRXRIXRGG 756
GG G GG G GG G GG G + GG
Sbjct: 115 GGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGG 174
Query: 755 --GXXXGGWGGGXXXXGGWGXXAGAXG 681
G GG+GGG GG G G G
Sbjct: 175 YGGGGDGGYGGGGFGGGGMGGYGGGMG 201
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GGG GG GGG GG+G G
Sbjct: 101 GGGDFGGGMGGGGYGGGGYGGGGDGGG 127
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXGSRAEVXXXXVEXVGATHGMGAARSG 606
GGG GG GGG GG +G GS + G G G G
Sbjct: 789 GGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGG 840
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -2
Query: 791 GG*GRXRIXRGGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GG G GGG GG GGG GG G G G
Sbjct: 22 GGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYG 58
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 758 GGXXXGGWGGGXXXXGGWGXXAGAXG 681
GG GG+GGG GG G G G
Sbjct: 17 GGGSRGGYGGGGRGGGGGGYSGGRGG 42
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXGSR 675
GGG GG+GGG GG G G+ G R
Sbjct: 49 GGGYGGGGYGGG-GRGGGRGGSNGSAGGR 76
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 758 GGXXXGGWGGGXXXXGGWGXXAG 690
GG GG GGG GGWG G
Sbjct: 216 GGGGGGGGGGGYGSGGGWGGGGG 238
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -2
Query: 791 GG*GRXRIXRGGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GG G GGG GG GG GGWG G G
Sbjct: 220 GGGGGGGYGSGGGWGGGG-GGRDRDRGGWGGGGGGRG 255
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = -2
Query: 791 GG*GRXRIXRGGGXXXGGWGGGXXXXGGWGXXAGAXGSR 675
GG R R GGG G+GGG GG+G G G R
Sbjct: 238 GGRDRDRGGWGGGGGGRGYGGG-GGGGGYGYGGGGGGRR 275
>AL110484-17|CAB54408.1| 586|Caenorhabditis elegans Hypothetical
protein Y38E10A.17 protein.
Length = 586
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXGSR 675
GGG GG+G G GG+G GA G+R
Sbjct: 460 GGGGGSGGYGAGGGGSGGYG-AGGAGGAR 487
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -2
Query: 791 GG*GRXRIXRGGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GG G GGG GG GGG GG G G G
Sbjct: 93 GGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGG 129
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GGG GG GGG GG G G G
Sbjct: 87 GGGCGGGGCGGGGGGCGGGGGCGGGGG 113
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GGG GG GGG GG G G G
Sbjct: 104 GGGGCGGGGGGGCGGGGGGGCGGGGGG 130
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/58 (31%), Positives = 21/58 (36%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXGSRAEVXXXXVEXVGATHGMGAARSGPXXXHS 588
GGG GG GGG GG G A G V ++G G P H+
Sbjct: 112 GGGGCGGGGGGGCGGGGGGGGGGYASGGSGGFASAPVSLPAPSYG-GPPPPAPSFSHA 168
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GGG GG GGG GG G G+ G
Sbjct: 119 GGGGGCGGGGGGCGGGGGGGCGGGSSG 145
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GGG GG GGG GG G G G
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCG 111
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXGSRA 672
GGG GG GGG GG+ +G G A
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSA 297
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GGG GG GG GG G AG G
Sbjct: 251 GGGYSSGGSSGGGYSTGGGGGYAGGGG 277
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GGG GG GGG GG G G+ G
Sbjct: 119 GGGGGCGGGGGGCGGGGGGGCGGGSSG 145
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GGG GG GGG GG G G G
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCG 111
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXGSRA 672
GGG GG GGG GG+ +G G A
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSA 297
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GGG GG GG GG G AG G
Sbjct: 251 GGGYSSGGSSGGGYSTGGGGGYAGGGG 277
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXGS 678
GGG GG+GGG GG+G G GS
Sbjct: 481 GGGGGGGGFGGG---GGGFGGGGGGFGS 505
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GGG GG GGG GG G G G
Sbjct: 52 GGGGGGGGGGGGGGFGGGNGGFGGGGG 78
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXGSRAEVXXXXVEXVGATHGMGAARSG 606
GGG G GGG GG G A + G+ G G G A +G
Sbjct: 323 GGGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGGAAAG 374
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXGS 678
GGG GG GGG GG G A S
Sbjct: 105 GGGYAAGGGGGGGGGGGGGGCHCAAQAS 132
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/58 (34%), Positives = 21/58 (36%)
Frame = -2
Query: 791 GG*GRXRIXRGGGXXXGGWGGGXXXXGGWGXXAGAXGSRAEVXXXXVEXVGATHGMGA 618
GG G GGG GG G G GG G GA GA +G GA
Sbjct: 788 GGGGGSNSNSGGGGGNGGGGNG---GGGNGNGGGAGDGNGGAGAGNGNGAGAGNGNGA 842
>U46753-7|AAA85763.2| 223|Caenorhabditis elegans Hypothetical
protein C34F11.8 protein.
Length = 223
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = -2
Query: 758 GGXXXGGWGGGXXXXGGW-GXXAGAXGSRAEVXXXXVEXVGATHGMG 621
GG GG+GGG GG G G + +G +HG G
Sbjct: 173 GGGYGGGYGGGYGYGGGLIGSLVNIGGGSGLGISTPIGGIGISHGWG 219
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GG GG+G G GG G AG G
Sbjct: 85 GGAGGGGGYGAGGGGGGGGGEAAGGGG 111
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -2
Query: 761 GGGXXXGGWGGG-XXXXGGWGXXAGAXG 681
GGG GG+GGG GG+G G G
Sbjct: 672 GGGGGRGGYGGGDRGGRGGYGGDRGGRG 699
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -2
Query: 761 GGGXXXGGWGGG-XXXXGGWGXXAGAXG 681
GGG GG+GGG GG+G G G
Sbjct: 713 GGGGGRGGYGGGDRGGRGGYGGDRGGRG 740
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 764 RGGGXXXGGWGGGXXXXGGWGXXAG 690
R GG GG+GGG GG G G
Sbjct: 822 RQGGYQGGGYGGGYGGGGGGGGGGG 846
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 764 RGGGXXXGGWGGGXXXXGGWGXXAGAXGSR 675
RGG GG+ GG GG G G G R
Sbjct: 4 RGGRGGGGGFRGGRGGGGGGGFRGGRGGDR 33
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -2
Query: 761 GGGXXXGGWGGG-XXXXGGWGXXAGAXG 681
GGG GG+GGG GG+G G G
Sbjct: 672 GGGGGRGGYGGGDRGGRGGYGGDRGGRG 699
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 761 GGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GGG GG GG GG+G G G
Sbjct: 75 GGGGGYGGGHGGAAVGGGYGGAVGGGG 101
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -2
Query: 782 GRXRIXRGGGXXXGGWGGGXXXXGGWGXXAGAXG 681
GR +GG GG GG GG G +G G
Sbjct: 584 GRDHRYQGGSGNGGGGNGGGGGFGGGGQRSGGGG 617
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -2
Query: 791 GG*GRXRIXRGGGXXXGGWGGGXXXXGGWGXXAGAXGSRAE 669
GG G GGG GG GG GG G +G G R +
Sbjct: 591 GGSGNGGGGNGGGGGFGG--GGQRSGGGGGFQSGGGGGRQQ 629
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,644,742
Number of Sequences: 27780
Number of extensions: 185864
Number of successful extensions: 1742
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1420
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -