Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_P01
         (856 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...   110   6e-26
AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.           84   5e-18
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           75   2e-15
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    27   0.96 

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score =  110 bits (264), Expect = 6e-26
 Identities = 49/79 (62%), Positives = 59/79 (74%)
 Frame = +1

Query: 361 PNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPD 540
           PND  RHVGDLGN+  DEN  ++    D  +SL G   +IGRA+V+H + DD GK++HPD
Sbjct: 93  PNDQVRHVGDLGNIAADENGIAKTSYSDTVVSLYGARSVIGRAIVIHAEVDDLGKTNHPD 152

Query: 541 SRKTGNAGGRVACGVIGIL 597
           S KTGNAGGRVACGVIGIL
Sbjct: 153 SLKTGNAGGRVACGVIGIL 171



 Score = 58.4 bits (135), Expect = 3e-10
 Identities = 21/38 (55%), Positives = 29/38 (76%)
 Frame = +3

Query: 246 LGLPPGEYGFHVHEKGXLSGGCVSTGSHFNPEHKDXGS 359
           +GL PG++GFH+HEKG L+ GC STG H+NP+    G+
Sbjct: 55  VGLTPGKHGFHIHEKGDLTDGCASTGGHYNPDKVSHGA 92


>AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.
          Length = 75

 Score = 84.2 bits (199), Expect = 5e-18
 Identities = 36/72 (50%), Positives = 51/72 (70%)
 Frame = +1

Query: 379 HVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRKTGN 558
           H GD+GN+V DEN  +++DL   QI+LSG   ++GR++V+H   DD G   H  S+ TG+
Sbjct: 1   HAGDMGNIVADENGEAKVDLTATQIALSGALNVVGRSLVVHADPDDLGVGGHELSKTTGD 60

Query: 559 AGGRVACGVIGI 594
           AG R+ACGVIG+
Sbjct: 61  AGARLACGVIGL 72


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 75.4 bits (177), Expect = 2e-15
 Identities = 32/78 (41%), Positives = 49/78 (62%)
 Frame = +1

Query: 361 PNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPD 540
           P+D N HVGDLGN+V      ++I + + +++L G   IIGR + + E  DD G+  H  
Sbjct: 11  PDDANCHVGDLGNIVAYSTGLAKIQIANKKLTLVGDRSIIGRTLSISEYEDDLGRGKHDY 70

Query: 541 SRKTGNAGGRVACGVIGI 594
           S+ TGN+G  +AC +IG+
Sbjct: 71  SKTTGNSGNCIACAIIGV 88


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 26.6 bits (56), Expect = 0.96
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 261 GEYGFHVHEKGXLSGGCVSTGSHFNPEHKDXG 356
           G+Y  +  + G  SGG  S  SH +P H   G
Sbjct: 453 GDYMNNCLQSGYFSGGFSSLHSHHSPHHVSPG 484


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,479
Number of Sequences: 2352
Number of extensions: 10639
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)