Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_O10
(879 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 33 0.054
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 31 0.29
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 30 0.38
SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 30 0.50
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 29 1.2
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 29 1.2
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 28 2.0
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 2.7
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 27 2.7
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 27 4.7
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 27 4.7
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 27 4.7
SPCC23B6.02c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 26 6.1
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 33.1 bits (72), Expect = 0.054
Identities = 21/87 (24%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +1
Query: 283 FSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPD-- 456
F + ++ + +L N + + L + +A KA+++LEQ+ + E L K H +
Sbjct: 27 FDRFLQEERKKLLNNKNEYLRQLS-EINEAQKKAEKSLEQTEARKQNFTELLEKEHEEQA 85
Query: 457 -VEKNATALREKLQAAVQNTVQESQKL 534
E+ + +EKL A ++ + S++L
Sbjct: 86 ITEQEIFSFQEKLDAMLKRKQKLSEEL 112
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 30.7 bits (66), Expect = 0.29
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 286 SKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRK-AHPDVE 462
++ + D S S +L A AK A DA A E +++ +IER+A K A + E
Sbjct: 129 ARQYNDRSTSEALELEARAKK---AAQDAE-LASERAREAQSSIERSASLREKQAREEAE 184
Query: 463 KNATALRE 486
+ ATALRE
Sbjct: 185 RAATALRE 192
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 30.3 bits (65), Expect = 0.38
Identities = 17/81 (20%), Positives = 38/81 (46%)
Frame = +1
Query: 331 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN 510
N + ++ AL + KA + LE+ ++ E + EE+ H + T+ + + +
Sbjct: 337 NLVSLAIYEALYEKFLKACKDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEK 396
Query: 511 TVQESQKLAKKVSSNVQETNE 573
+QE ++ K + Q+ +E
Sbjct: 397 IIQEKSRVDKMIDEYRQKLSE 417
>SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 168
Score = 29.9 bits (64), Expect = 0.50
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +1
Query: 298 KDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEE 435
KDG+++ +LN FAK L + + +A + + IE+++ E
Sbjct: 111 KDGTDAFANELNLFAKKLGFSKNSFDARALDTESEDETEIEKSSSE 156
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/69 (24%), Positives = 38/69 (55%)
Frame = +1
Query: 379 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 558
K+++ LE S Q +E E + P+V++ +EK ++ V+ +E +K+S N+
Sbjct: 132 KSEKPLETS-QKVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKE-----EKISRNL 185
Query: 559 QETNEXLAP 585
+ ++ ++P
Sbjct: 186 RSSSRSISP 194
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 277 QDFSKAWKDGSESVLQQLNAFAKSLQGALGD-ANGKAKEALEQSR-QNIERTAE 432
+D + A+ + SVLQ+L+ + +QG LG N AL Q + QN++ E
Sbjct: 79 EDMANAFAEKRRSVLQELSELEEEVQGILGVLENPDLIAALRQDKGQNLQHLQE 132
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 2.0
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Frame = +1
Query: 379 KAKEALE---QSRQNIERTAEELRKAHPDVEKNATALREKLQAAV-----QNTVQESQKL 534
K KE +E Q ++ +ER E LRK D K+ + +AA+ + + E QKL
Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRK-ELDKYKDLVETEAEKRAAITKEECEKSWLEQQKL 186
Query: 535 AKKVSSNVQETNEXLAPKIK 594
K + T + L KI+
Sbjct: 187 YKDMEQENASTIQKLTSKIR 206
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/73 (23%), Positives = 38/73 (52%)
Frame = +1
Query: 394 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 573
++ Q+IE T L K D+E++ +++ + V + Q+ ++++ +Q+T E
Sbjct: 496 MKTQEQSIELT--RLYKQLQDIEEDYENKLMRMEQQWREDVDQLQEYVEEITQELQDTKE 553
Query: 574 XLAPKIKAAYDDF 612
L+ K + DD+
Sbjct: 554 VLSKSSKES-DDY 565
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 409 ASTVPKPPWPCRSRLRALPG 350
AST+ K PWP + L +PG
Sbjct: 38 ASTLEKEPWPASTALLVMPG 57
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 4.7
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +1
Query: 346 SLQGALGDANGKAKEALEQSRQNIE-----RTAEELRKAHPDVEKNATALREKLQAA 501
S++ L + N + KE +E + RT +E EKN LRE+L+ A
Sbjct: 520 SMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTA 576
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 26.6 bits (56), Expect = 4.7
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = +1
Query: 307 SESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALRE 486
S + + A K L GA KAKE ++ R +RTA E+RK +E+ R
Sbjct: 143 SRRISGMILAHFKRLSGA---DEKKAKEEDKRIRLLAKRTAWEIRKKWKVIEREVRRRRA 199
Query: 487 KLQAAVQNTVQESQ 528
+ A Q + Q
Sbjct: 200 ERAAEAQRVAGKEQ 213
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 26.6 bits (56), Expect = 4.7
Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 3/132 (2%)
Frame = +1
Query: 79 SSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQG---HRTPHQGSSIRL*XQQF 249
+SA++ H + V L D AT RS L +R S +
Sbjct: 28 ASAIANFRSRHAQAVAKLGTLREQATTVDFATYRSVLANKEIVNRIESSMKSFKPVKIDL 87
Query: 250 NSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTA 429
NS K+ +A F +G++ ++ + A ++L L + +EQ+R E T
Sbjct: 88 NSQLKAINA--FEAKASEGAKKNVELVKAELQNLSATLKN--------IEQARPTEEITI 137
Query: 430 EELRKAHPDVEK 465
E++++A P++EK
Sbjct: 138 EDMKQAVPEIEK 149
>SPCC23B6.02c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 139
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/75 (20%), Positives = 41/75 (54%)
Frame = +1
Query: 382 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 561
AKE + ++ + + K + ++ + ++KL AA++ +E ++L K+S ++Q
Sbjct: 40 AKEIANIALRSGGSESNGISKKKKNKKQTSKKAKDKLAAALKAQARE-ERLDTKISKSLQ 98
Query: 562 ETNEXLAPKIKAAYD 606
+ + AP+ + +++
Sbjct: 99 KQEKLKAPRRRISFN 113
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,137,777
Number of Sequences: 5004
Number of extensions: 32154
Number of successful extensions: 152
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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