Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_O03
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 31 1.4
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 31 1.4
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 30 1.9
Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical pr... 29 3.3
U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucos... 29 3.3
U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucos... 29 3.3
DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide glyc... 29 3.3
DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide glyc... 29 3.3
U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fb... 29 5.8
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 5.8
Z71267-2|CAA95849.1| 311|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 28 7.7
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 28 7.7
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -1
Query: 275 SLITXPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 96
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 95 S 93
S
Sbjct: 136 S 136
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -1
Query: 275 SLITXPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 96
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 95 S 93
S
Sbjct: 136 S 136
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 184 LYMSVVIGEYETAIA-KCSEYLKEKKGXVIKEAVERLIE 297
LYM +G+Y+ A KC +Y K+ G EA+ I+
Sbjct: 87 LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125
>Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.11 protein.
Length = 459
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Frame = +1
Query: 238 EYLKEKKGXVIKEA-----VERLIENGKRNTMDFAYQLWTKDGKEIVKSY--FPIQFRVI 396
+Y KE V E V+ ++ K+N +D WT+ E +KSY F + R
Sbjct: 183 DYYKEYSRLVSNETSRNVFVKSIVSFFKKNDIDGIEIFWTRPKYEDIKSYSSFIQELRSA 242
Query: 397 FTEQTVKLINKRDHHALKLI 456
FTE K N+++ + + LI
Sbjct: 243 FTE-LQKRWNRKNEYIISLI 261
>U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform c protein.
Length = 379
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -1
Query: 230 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 78
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform b protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -1
Query: 230 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 78
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -1
Query: 230 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 78
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -1
Query: 230 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 78
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 9 protein.
Length = 703
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +1
Query: 178 EQLYMSVVIGEYETAIAKCSEYLKEKKGXVIKEAVERLIENGKRNTMDFAYQLWTKDGKE 357
E+ Y ++GE E + KC +K++ G ++++IE + + F +TK+ +
Sbjct: 440 EEKYQHEILGEMEGQVLKC---VKDQNG---NHVIQKVIERVEPERLQFIIDAFTKNNSD 493
Query: 358 IV--KSYFPIQFRVI 396
V S P RVI
Sbjct: 494 NVYTLSVHPYGCRVI 508
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 270 DNXSLLFLQIFRAFGDSGLVFTNDDTHIQLLRQYVISSWCKCGVRSQRTHGEDEG 106
DN + + Q FR+ G S + + + ISSW +C + GEDEG
Sbjct: 795 DNFTCMCAQGFRSEGRSCVSECKPNDFVCTKTYKCISSWWRCDGQDDCGDGEDEG 849
>Z71267-2|CAA95849.1| 311|Caenorhabditis elegans Hypothetical
protein W01A8.5 protein.
Length = 311
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = -1
Query: 170 TSSVLGASVALEASAHTARTKANKVSLILAQWLSLKASQQTTQNLKNSL 24
T+ + G+S+A E + HT + + + ILA+ S ++ +L++ L
Sbjct: 8 TNEIPGSSMAFEVANHTVTEEPSPLDRILAEGRSFNGGNWSSDDLRSLL 56
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = -3
Query: 324 EVHGVPLAVFDQTLHGFLDNXSLLFLQI----FRAFGDSGLVFTNDDTHIQLLRQ 172
+ G+P +Q L F N + L+I R GD+ +VFTN++ + L++
Sbjct: 8 QCRGLPWEATEQELRDFFGNNGIESLEIPRRNGRTSGDAKVVFTNEEDYNNALKK 62
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = -3
Query: 324 EVHGVPLAVFDQTLHGFLDNXSLLFLQI----FRAFGDSGLVFTNDDTHIQLLRQ 172
+ G+P +Q L F N + L+I R GD+ +VFTN++ + L++
Sbjct: 8 QCRGLPWEATEQELRDFFGNNGIESLEIPRRNGRTSGDAKVVFTNEEDYNNALKK 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,289,307
Number of Sequences: 27780
Number of extensions: 345054
Number of successful extensions: 1021
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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