Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_O02
(860 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 173 2e-43
07_01_0578 + 4295386-4296489,4297394-4297507 171 8e-43
10_02_0199 + 6668902-6669293,6669825-6669882 34 0.17
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 33 0.22
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 33 0.39
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 32 0.68
01_06_0292 + 28243408-28243543,28243631-28243760,28243860-28244550 31 0.89
08_02_1278 - 25838146-25839411 31 1.2
03_05_0366 - 23505755-23506441 31 1.2
02_05_1006 + 33448476-33448915,33449016-33449083,33449681-334497... 31 1.6
11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 29 3.6
08_02_1285 - 25881091-25881798 29 3.6
08_02_0105 + 12448808-12449152,12449218-12449409,12449520-124496... 29 4.8
08_01_0044 + 301981-302826,302972-303580 29 6.3
04_01_0588 + 7657510-7657992,7658397-7658843 29 6.3
02_04_0457 + 23093020-23093343,23093798-23093806 29 6.3
01_07_0282 + 42462685-42462807,42463267-42463617,42464110-424641... 29 6.3
09_04_0273 + 16292553-16293002 28 8.3
04_04_0691 - 27302196-27302581,27302683-27302854 28 8.3
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 173 bits (421), Expect = 2e-43
Identities = 81/117 (69%), Positives = 90/117 (76%), Gaps = 1/117 (0%)
Frame = +3
Query: 138 SVARPLXSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 314
+ ARPL SV + E A +P V +APIRPD+V H +S N RQPY VS+ AG
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62
Query: 315 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 485
HQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHRRVN
Sbjct: 63 HQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVN 119
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = +1
Query: 514 AAVAATGVPALVQARGHIIEKIPELPLVVADKVQEINXTKQAV 642
+A+AAT VP+LV ARGH IE +PE PLVV+D ++ I T Q++
Sbjct: 129 SALAATAVPSLVLARGHRIEGVPEFPLVVSDSIESIEKTAQSI 171
Score = 37.9 bits (84), Expect = 0.010
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2
Query: 581 PSFPWL*LTKSRRSTRPNRLS-SFLRRLKAWSDILKVYKSXRSSCW*G*MRNRRXIQXKG 757
P FP L ++ S S S L+++ A++D K S G MRNRR I KG
Sbjct: 151 PEFP-LVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRAGKGKMRNRRYINRKG 209
Query: 758 PLIIFNKD-QGLTRPFRXIP 814
PLI++ + + + FR +P
Sbjct: 210 PLIVYGTEGSKVVKAFRNLP 229
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 171 bits (415), Expect = 8e-43
Identities = 79/115 (68%), Positives = 92/115 (80%), Gaps = 2/115 (1%)
Frame = +3
Query: 147 RPLXSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 320
RPL SV + + + T ++ L VF+AP+RPD+V VH +S N RQPY VS+ AGHQ
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65
Query: 321 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 485
TSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WR+WHRRVN
Sbjct: 66 TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWHRRVN 120
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +1
Query: 514 AAVAATGVPALVQARGHIIEKIPELPLVVADKVQEINXTKQAV 642
+A+AAT VP+LV ARGH IE +PELPLV++D + I T QA+
Sbjct: 130 SALAATSVPSLVLARGHRIETVPELPLVISDSAESIEKTSQAI 172
Score = 37.1 bits (82), Expect = 0.018
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +2
Query: 569 LKRFPSFPWL*LTKSRRSTRPNRLSSFLRRLKAWSDILKVYKSXRSSCW*G*MRNRRXIQ 748
++ P P + + + ++ L+++ A++D K S G MRNRR I
Sbjct: 148 IETVPELPLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKMRNRRYIN 207
Query: 749 XKGPLIIFNKD-QGLTRPFRXIP 814
KGPLI++ + + + FR +P
Sbjct: 208 RKGPLIVYGTEGSKIVKAFRNLP 230
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3
Query: 327 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 437
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 33.5 bits (73), Expect = 0.22
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2
Query: 433 PPRHMLPKAP*PDLWVPPP 377
PPRH++P+ P P WVPPP
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 32.7 bits (71), Expect = 0.39
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +2
Query: 110 ASLK*RNESIGSPTFXVGVFREERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 265
ASL N + P+F V G SQA V + GAHT G Q C F
Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 110 ASLK*RNESIGSPTFXVGVFREERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 265
ASL N I +PTF +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>01_06_0292 + 28243408-28243543,28243631-28243760,28243860-28244550
Length = 318
Score = 31.5 bits (68), Expect = 0.89
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -1
Query: 548 TSAGTPVAATAAGQGRSPLSEVDATVPAPP 459
TS T AA A RSPL E+ VP PP
Sbjct: 209 TSVATAAAAAAVAAQRSPLDELICQVPPPP 238
>08_02_1278 - 25838146-25839411
Length = 421
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = -3
Query: 651 RKDDSLFGLVDLLDFVSYNQGKLGNLFNNVSSSL 550
R+ LF L+D+LD V+ +G+L LF+ S++L
Sbjct: 91 REPQRLFRLLDMLDAVARERGRLDELFSGESATL 124
>03_05_0366 - 23505755-23506441
Length = 228
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 213 FVFKAPIRPDLVNDVHVSMSKNSR-QPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 389
++ AP D +V S + R P C S E + +AES TG A R R+ G T
Sbjct: 108 WIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEAAESGATGLAHTRAGRIHAGPT 167
Query: 390 HRSGQGA 410
+ + + A
Sbjct: 168 NDNDEEA 174
>02_05_1006 +
33448476-33448915,33449016-33449083,33449681-33449751,
33449905-33450156,33450473-33450636,33450731-33450773,
33451044-33451161,33451384-33451481,33451550-33451594
Length = 432
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 572 SIMCPLA*TSAGTPVAATAAGQGRSPLSEVDATVPAPPG 456
S C LA SA T + G+GR P S + +PPG
Sbjct: 11 SATCSLAAASASTSASPRRRGRGRRPASAMGQAPSSPPG 49
>11_01_0072 +
570345-570476,570640-570831,571095-571260,571487-571872
Length = 291
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 110 ASLK*RNESIGSPTFXVGVFREERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 265
ASL N I +PT +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>08_02_1285 - 25881091-25881798
Length = 235
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 173 EERDGAGCSQAPPVRVQGAHTSGPG 247
EE DG G ++A V +GAH +G G
Sbjct: 173 EEEDGEGSAEAMEVEEEGAHLAGAG 197
>08_02_0105 +
12448808-12449152,12449218-12449409,12449520-12449685,
12449771-12450201
Length = 377
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 110 ASLK*RNESIGSPTFXVGVFREERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 265
ASL+ N ++ +PT V ++ G S V + GAHT G + C+ F
Sbjct: 197 ASLQGANTNLPAPTSGVATLVQKFRNVGLSAKDMVALSGAHTIGKAR-CTTF 247
>08_01_0044 + 301981-302826,302972-303580
Length = 484
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 678 ISDHALRRLRKDD-SLFGLVDLLDFVSYNQGKLGNLFNNVSSSLNERWDAGS 526
I DHA R +R+ D D +D + Y+Q + G +N+ + L + ++AG+
Sbjct: 238 IDDHATRLVRRHDHDQQQDSDFIDILLYHQEEYGFTRDNIKAILVDMFEAGT 289
>04_01_0588 + 7657510-7657992,7658397-7658843
Length = 309
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Frame = +3
Query: 249 NDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRV---RGGGTHRSGQGAFGN 419
+D+ ++ SR + + ++S+ W G R+ + GGG R G
Sbjct: 201 HDIQWGDNQPSRSSGVLPSSSEWRSSSSRWDLGEITRRMDTLDMQMGGGQQRRPPAEDGL 260
Query: 420 MCRGGRMFAPTKPWRRW 470
P PWRRW
Sbjct: 261 GWASSWFGRPNLPWRRW 277
>02_04_0457 + 23093020-23093343,23093798-23093806
Length = 110
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +3
Query: 312 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 416
G + S W G A A VRGGG RSG G G
Sbjct: 76 GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGGDEG 109
>01_07_0282 +
42462685-42462807,42463267-42463617,42464110-42464136,
42464359-42464409,42465514-42465666,42465927-42465941
Length = 239
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1
Query: 542 AGTPVAATAAGQGRSPLSEVDATVPAPPGL 453
A PVA TAAG+G P + TVP P G+
Sbjct: 112 AAPPVAPTAAGEG-YPFIGSNPTVPLPTGM 140
>09_04_0273 + 16292553-16293002
Length = 149
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 458 LAALAPSRQPPTAESGLGQQPLLLPAS 538
LA P+ PP A S + PLLLP+S
Sbjct: 54 LAGAKPASIPPPASSDAARAPLLLPSS 80
>04_04_0691 - 27302196-27302581,27302683-27302854
Length = 185
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +1
Query: 454 SPGGAGTVASTSDSGERPWPAAVAATGVPALVQARGH 564
SPGGAG ++ G P A GVP L H
Sbjct: 127 SPGGAGATPASPGGGGALSPGAAGDAGVPTLDLGGSH 163
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,809,366
Number of Sequences: 37544
Number of extensions: 533179
Number of successful extensions: 1984
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1984
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -