Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_N24
         (897 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0407 - 3219980-3221278                                           30   2.2  
08_01_0703 + 6212409-6212456,6212661-6212742,6214031-6214106,621...    30   2.9  
02_05_0748 - 31463559-31464764                                         29   3.8  
02_03_0123 - 15497825-15498193                                         29   6.6  
09_03_0058 + 11950668-11950701,11951068-11951106,11951586-119519...    28   8.8  
07_03_0396 + 17672009-17672339,17672408-17673087                       28   8.8  

>12_01_0407 - 3219980-3221278
          Length = 432

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 381 LGKIFDXHYHFHHRSLTKRSLTPAHEH 461
           LGK+ D H+H HHR   K  ++   EH
Sbjct: 59  LGKV-DHHHHHHHRQHAKNGMSDDEEH 84


>08_01_0703 +
           6212409-6212456,6212661-6212742,6214031-6214106,
           6214498-6214594,6214760-6214862,6214973-6215103,
           6215285-6215462,6215528-6215715,6215945-6216154,
           6216231-6216578,6216660-6216786,6217304-6217455
          Length = 579

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -3

Query: 331 LPVYGRPMLACNALVLFQCATEPTPGSRVREHRAPSHGHTHQLVLINIA--HTQNSLGRL 158
           L V G P+ A   +V F    +      +RE R+P+ G T     I +A  +T+  L  L
Sbjct: 349 LAVKGDPVSAFGGIVAFNTTIDEDLAKEIREFRSPTDGQTRMFYEIVVAPGYTEKGLEIL 408

Query: 157 R 155
           +
Sbjct: 409 K 409


>02_05_0748 - 31463559-31464764
          Length = 401

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = -1

Query: 498 PIVPXYHLLICRDARGLA*GISSLVNDDENGSXRRISFPRLTKPWXPG 355
           P +P     +C D   LA G   LV   E  S   +S+  LT  W PG
Sbjct: 139 PKMPHNECFMCSDKESLAVGTELLVFGKEILSHIVLSYSILTNSWSPG 186


>02_03_0123 - 15497825-15498193
          Length = 122

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +1

Query: 316 VHIPEGREVADAVARXPRLRQ-SWERYST 399
           VH+P G  VA       RLR+  WERY T
Sbjct: 39  VHVPSGEVVASYEVLERRLRELGWERYLT 67


>09_03_0058 +
           11950668-11950701,11951068-11951106,11951586-11951982,
           11952016-11952314,11953743-11956795
          Length = 1273

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 316 VHIPEGREVADAVARXPRLRQSW 384
           + I +G +VA+AVA   R RQSW
Sbjct: 134 MEIADGEDVAEAVADFARRRQSW 156


>07_03_0396 + 17672009-17672339,17672408-17673087
          Length = 336

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +2

Query: 344 PMPSPGXHGFVNLGKDIRRXL--PFSSSFTNEEIPHASPRASRQIR 475
           P P+   HG  N+ +D+++ L  P S++  + + P    +ASR  R
Sbjct: 157 PAPAEANHGRSNIARDVQKSLLVPVSAAKVHNQKPAPRDQASRLCR 202


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,275,106
Number of Sequences: 37544
Number of extensions: 373976
Number of successful extensions: 827
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)