Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_N21
(905 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces p... 137 2e-33
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 39 0.001
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 38 0.002
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 37 0.003
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.032
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.074
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.39
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.52
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 2.8
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 3.7
SPCPB16A4.03c |ade10||IMP cyclohydrolase|Schizosaccharomyces pom... 26 6.4
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 6.4
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 8.5
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 8.5
>SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 137 bits (332), Expect = 2e-33
Identities = 67/104 (64%), Positives = 82/104 (78%)
Frame = +3
Query: 267 EISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSXLKGMALNL 446
E+ +ILEERI GA +A + E+GRVLSIGDGIAR+ GL N+QAEE+VEFSS +KGMALNL
Sbjct: 35 EVPSILEERIRGAYNQAQMMESGRVLSIGDGIARISGLSNVQAEELVEFSSGIKGMALNL 94
Query: 447 EPDNVGVVVFGNDQLIREGDIVXRTXAIXXVPVAXXILGRVXXA 578
E D VG V+FGND+L+REG++V RT I VPV +LGRV A
Sbjct: 95 EADTVGCVLFGNDRLVREGEVVKRTRHIVDVPVGEALLGRVVDA 138
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 38.7 bits (86), Expect = 0.001
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 3/70 (4%)
Frame = +3
Query: 684 SXLXPPPPXXPGPXXAPXXPXXXPPXP---PPXXXXXXPPXXPXXXXPXXXSXPAXXXXX 854
S L PP P P P P PP P PP PP P S P+
Sbjct: 135 SELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAV 194
Query: 855 XXXXPXXPPP 884
P PPP
Sbjct: 195 PPMPPKVPPP 204
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/67 (28%), Positives = 22/67 (32%)
Frame = +1
Query: 640 PPXVSFPRXXCXXXXPXWXPPLXXPXAPXXPRXXPXXXPRPPPPXXXPXXLPXXPXXXXP 819
PP + PR P PP+ AP P P +P P P P P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPI-PSKAPPIPSSLP-PPAQPAAPVKSPPSAPSLPSAVPP 196
Query: 820 XXXPXPP 840
PP
Sbjct: 197 MPPKVPP 203
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/67 (26%), Positives = 18/67 (26%), Gaps = 3/67 (4%)
Frame = +1
Query: 697 PPLXXPXAPXXPRXXPXXXPRPP---PPXXXPXXLPXXPXXXXPXXXPXPPXXXXXXXXX 867
PP P P P P P P PP P P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Query: 868 PXXPPPP 888
P PPPP
Sbjct: 199 PKVPPPP 205
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/54 (25%), Positives = 16/54 (29%)
Frame = +2
Query: 719 PPXGPGPPPXXXPXPPPPPXXXRPSPXXXXPXXXXXLXXRXXXXPXXXXPXXXP 880
PP P PP PP RPS P + + P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 37.9 bits (84), Expect = 0.002
Identities = 23/65 (35%), Positives = 24/65 (36%)
Frame = -1
Query: 890 GGGGGXXGXXXXXXXXXGGXGXXXGXXXXGXXGRXXGXXXGGGGRGXXXGXXRGXXGAXG 711
GG GG G GG G G G G G G GGRG G G G G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRG---GARGGRGGRGGARGGRGGSSGGRG 65
Query: 710 XXRGG 696
+GG
Sbjct: 66 GAKGG 70
Score = 32.7 bits (71), Expect = 0.074
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = -3
Query: 810 GXXXXGEGRXXXGGGGGXGXXXGGGPGPXGGXGXXEGGXPVGXGXGTGXPG 658
G G G G GG G GG G GG G GG G G G
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 32.3 bits (70), Expect = 0.097
Identities = 20/61 (32%), Positives = 22/61 (36%)
Frame = -1
Query: 794 GRXXGXXXGGGGRGXXXGXXRGXXGAXGXXRGGXQXGXXXXQXXRGNDTXGGXTXRHTGX 615
G G GGRG G G G G RGG + G + RG GG G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG-ARGGRGGSSGGR 64
Query: 614 G 612
G
Sbjct: 65 G 65
Score = 31.9 bits (69), Expect = 0.13
Identities = 22/66 (33%), Positives = 23/66 (34%)
Frame = -1
Query: 839 GGXGXXXGXXXXGXXGRXXGXXXGGGGRGXXXGXXRGXXGAXGXXRGGXQXGXXXXQXXR 660
GG G G G G G GGGRG G RG RGG + G R
Sbjct: 9 GGRGGSRG----GRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGR 64
Query: 659 GNDTXG 642
G G
Sbjct: 65 GGAKGG 70
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 37.1 bits (82), Expect = 0.003
Identities = 21/46 (45%), Positives = 21/46 (45%)
Frame = -3
Query: 795 GEGRXXXGGGGGXGXXXGGGPGPXGGXGXXEGGXPVGXGXGTGXPG 658
GEG GG GG G GG G GG G GG G G G PG
Sbjct: 215 GEGHHH-GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPG 259
Score = 36.7 bits (81), Expect = 0.005
Identities = 22/53 (41%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -3
Query: 810 GXXXXGEGRXXXGGGG--GXGXXXGGGPGPXGGXGXXEGGXPVGXGXGTGXPG 658
G G G G GG G GGGPG GG GG P G G G G G
Sbjct: 217 GHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = -2
Query: 883 GGGXXGXXXXXXXXXAGXEXXXGXXXXGXXG-GXXXXXXGGGXGGXXXGXXGAXWGPGXX 707
G G G G G G G G GGG GG G G GPG
Sbjct: 209 GFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGH 268
Query: 706 GGGG 695
GG G
Sbjct: 269 GGPG 272
Score = 30.7 bits (66), Expect = 0.30
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -2
Query: 769 GGGXGGXXXGXXGAXWGPGXXGG-GGXSXDXXRXRXXGGMIXG 644
GGG GG G G GPG GG GG + GG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGG 229
Score = 29.9 bits (64), Expect = 0.52
Identities = 23/59 (38%), Positives = 23/59 (38%), Gaps = 8/59 (13%)
Frame = -3
Query: 810 GXXXXGEGRXXXGGG--------GGXGXXXGGGPGPXGGXGXXEGGXPVGXGXGTGXPG 658
G G G G G GG G GG G GG G EGG P G G G G G
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG-PGGFGGGPGGFG 248
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.032
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 4/50 (8%)
Frame = +1
Query: 754 PRPPP----PXXXPXXLPXXPXXXXPXXXPXPPXXXXXXXXXPXXPPPPP 891
P PPP P P +P P P PP P PPPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 32.3 bits (70), Expect = 0.097
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 696 PPPPXXPGPXXAPXXPXXXPPXPPPXXXXXXPPXXP 803
P P P P AP PP PPP PP P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 696 PPPPXXPGPXXAPXXPXXXPPXPPP 770
PPPP PG A P PP PPP
Sbjct: 762 PPPPPPPGVAGAGPPP---PPPPPP 783
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 699 PPPXXPGPXXAPXXPXXXPPXPP 767
PPP P P A P PP PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 731 PGPPPXXXPXPPPPPXXXRPSPXXXXP 811
P P P P PPP P P P P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +1
Query: 700 PLXXPXAPXXPRXXPXXXPRPPPPXXXPXXLPXXPXXXXPXXXPXPPXXXXXXXXXPXXP 879
P P A P P P PPP P P P PP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPP----------APIMGGP--PPPPPPPGVAGAGPPPPP 779
Query: 880 PPPP 891
PPPP
Sbjct: 780 PPPP 783
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 696 PPPPXXPGPXXAPXXPXXXPPXPPPXXXXXXPPXXP 803
PPPP P AP P PP P P PP P
Sbjct: 734 PPPPAVIVPTPAP-APIPVPP-PAPIMGGPPPPPPP 767
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 719 PPXGPGPPPXXXPXPPPPP 775
PP PG P PPPPP
Sbjct: 764 PPPPPGVAGAGPPPPPPPP 782
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +3
Query: 690 LXPPPPXXPGPXXAPXXPXXXP-PXPPPXXXXXXPPXXP 803
L PPP P P P P P PPP PP P
Sbjct: 729 LKSPPP--PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.074
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 696 PPPPXXPGPXXAPXXPXXXPPXPPPXXXXXXPPXXP 803
PPP P P AP P P PPP P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 29.9 bits (64), Expect = 0.52
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 722 PXGPGPPPXXXPXPPPPPXXXRPSP 796
P PP P PPPPP P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPP 1718
Score = 29.5 bits (63), Expect = 0.69
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +1
Query: 718 APXXPRXXPXXXPRPPPPXXXPXXLPXXPXXXXPXXXPXPPXXXXXXXXXPXXPPPP 888
AP P P P+ P P P P P PP P PPPP
Sbjct: 1682 APAHPVSTPPVRPQSAAPPQMSAPTPPPP----PMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +2
Query: 719 PPXGPGPPPXXXPXPPPPPXXXRPSPXXXXP 811
PP P P P PPPP +P P
Sbjct: 1716 PPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.1 bits (57), Expect = 3.7
Identities = 20/69 (28%), Positives = 23/69 (33%)
Frame = +1
Query: 598 HGXSTPXPV*RXVXPPXVSFPRXXCXXXXPXWXPPLXXPXAPXXPRXXPXXXPRPPPPXX 777
H STP + PP +S P PP+ P P P P P PPP
Sbjct: 1685 HPVSTPPVRPQSAAPPQMSAPTPP--------PPPMSVPPPPSAP-PMPAGPPSAPPPPL 1735
Query: 778 XPXXLPXXP 804
P P
Sbjct: 1736 PASSAPSVP 1744
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.3 bits (65), Expect = 0.39
Identities = 23/70 (32%), Positives = 23/70 (32%), Gaps = 3/70 (4%)
Frame = +3
Query: 639 TXPXIIPPXXLXLXXSXLXPP-PPXXP-GPXXAPXXPXXXPPXPP-PXXXXXXPPXXPXX 809
T P PP L P PP P G AP P P PP P PP P
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAA 473
Query: 810 XXPXXXSXPA 839
P PA
Sbjct: 474 PAPPPAPAPA 483
Score = 30.3 bits (65), Expect = 0.39
Identities = 19/64 (29%), Positives = 19/64 (29%), Gaps = 4/64 (6%)
Frame = +1
Query: 712 PXAPXXPRXXPXXXPRPPP--PXXXPXXLPXXP--XXXXPXXXPXPPXXXXXXXXXPXXP 879
P P P P P PP P P P P P P P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 880 PPPP 891
PPP
Sbjct: 475 APPP 478
Score = 29.5 bits (63), Expect = 0.69
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 685 PXWXPPLXXPXAPXXPRXXPXXXPRPPPPXXXPXXLPXXPXXXXPXXXPXP 837
P PP AP P P PP P P P P P P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/62 (27%), Positives = 17/62 (27%), Gaps = 1/62 (1%)
Frame = +3
Query: 702 PPXXPGPXXAPXXPXXXPPXPPPXXXXXXPPXXP-XXXXPXXXSXPAXXXXXXXXXPXXP 878
PP P P P PP PP P P P PA P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 879 PP 884
P
Sbjct: 475 AP 476
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 719 PPXGPGPPPXXXPXPPPPP 775
PP G G P PPPPP
Sbjct: 325 PPIGNGSSNSSLPPPPPPP 343
Score = 26.6 bits (56), Expect = 4.8
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 719 PPXGPGPPPXXXPXPPPP 772
PP P PPP P P P
Sbjct: 470 PPAAPAPPPAPAPAPAAP 487
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/51 (29%), Positives = 15/51 (29%), Gaps = 2/51 (3%)
Frame = +1
Query: 742 PXXXPRPPPPXXXPXXLPXX--PXXXXPXXXPXPPXXXXXXXXXPXXPPPP 888
P PP P P P P P P PP P PP P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 25.8 bits (54), Expect = 8.5
Identities = 17/63 (26%), Positives = 17/63 (26%)
Frame = +3
Query: 696 PPPPXXPGPXXAPXXPXXXPPXPPPXXXXXXPPXXPXXXXPXXXSXPAXXXXXXXXXPXX 875
PPPP P A P PP PP P P P
Sbjct: 337 PPPPPPPRSNAAGSIPL------PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPA 390
Query: 876 PPP 884
PPP
Sbjct: 391 PPP 393
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.52
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 719 PPXGPGPPPXXXPXPPPPP 775
PP PG P P PPPPP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 740 PPXXXPXPPPPPXXXRPSPXXXXP 811
PP P PPPPP PS P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 699 PPPXXPGPXXAPXXPXXXPPXPPP 770
PPP P P P P PP PPP
Sbjct: 9 PPPPPPPPGFEP--PSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 697 PPLXXPXAPXXPRXXPXXXPRPPPP 771
PP P P P P P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 719 PPXGPGPPPXXXPXPPPPP 775
PP P PP P PPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPP 27
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 696 PPPPXXPGPXXAPXXPXXXPPXPPP 770
PPPP PG P PP PPP
Sbjct: 10 PPPPPPPG-----FEPPSQPPPPPP 29
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/64 (26%), Positives = 19/64 (29%), Gaps = 1/64 (1%)
Frame = +1
Query: 697 PPLXXPX-APXXPRXXPXXXPRPPPPXXXPXXLPXXPXXXXPXXXPXPPXXXXXXXXXPX 873
PP+ P AP P+ P P P P P P P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 874 XPPP 885
PPP
Sbjct: 1191 VPPP 1194
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/68 (26%), Positives = 18/68 (26%), Gaps = 1/68 (1%)
Frame = +3
Query: 684 SXLXPPPPXXPGPXXAPXXPXXXPPXPPPXXXXXXP-PXXPXXXXPXXXSXPAXXXXXXX 860
S PP P G P PP P P P P P S
Sbjct: 1127 SVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAA 1186
Query: 861 XXPXXPPP 884
P PPP
Sbjct: 1187 GVPPVPPP 1194
Score = 26.6 bits (56), Expect = 4.8
Identities = 19/82 (23%), Positives = 22/82 (26%), Gaps = 2/82 (2%)
Frame = +1
Query: 643 PXVSFPRXXCXXXXPXWXPPLXXPX--APXXPRXXPXXXPRPPPPXXXPXXLPXXPXXXX 816
P + P P PP+ P AP P+ P P P P P
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPV 1133
Query: 817 PXXXPXPPXXXXXXXXXPXXPP 882
P PP P P
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAP 1155
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/69 (23%), Positives = 20/69 (28%), Gaps = 1/69 (1%)
Frame = +1
Query: 685 PXWXPPLXXPXA-PXXPRXXPXXXPRPPPPXXXPXXLPXXPXXXXPXXXPXPPXXXXXXX 861
P PP+ P + P P+ PPP +P P P P
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPK 1096
Query: 862 XXPXXPPPP 888
PP P
Sbjct: 1097 PSVAAPPVP 1105
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/64 (25%), Positives = 19/64 (29%), Gaps = 2/64 (3%)
Frame = +1
Query: 697 PPLXXPXA--PXXPRXXPXXXPRPPPPXXXPXXLPXXPXXXXPXXXPXPPXXXXXXXXXP 870
PP+ P + P P+ P PPP P P P PP P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Query: 871 XXPP 882
P
Sbjct: 1229 VPVP 1232
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 722 PXGPGPPPXXXPXPPPPPXXXRPSP 796
P P P P PPPPP SP
Sbjct: 731 PPTPAPTPAVKHHPPPPPVRSSISP 755
>SPCPB16A4.03c |ade10||IMP cyclohydrolase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 585
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 151 AIRAEISDIFHKLIIVADGKPVTPLATRCGRTRKSKNLKEF 29
A+ +SD+ K+ V+D TPLA R R + + F
Sbjct: 267 AVGLPLSDVEKKVYFVSDITEFTPLACAYARARGADRMSSF 307
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/69 (23%), Positives = 17/69 (24%)
Frame = +1
Query: 685 PXWXPPLXXPXAPXXPRXXPXXXPRPPPPXXXPXXLPXXPXXXXPXXXPXPPXXXXXXXX 864
P W P+ P P P PPP P P P P
Sbjct: 36 PQWECPVRGLTIPPPPSVDHSAPPSGPPPSYSNSAAPATPAASASSAAPAPAPAASQNRA 95
Query: 865 XPXXPPPPP 891
P P P
Sbjct: 96 YGAAPQPYP 104
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 25.8 bits (54), Expect = 8.5
Identities = 20/52 (38%), Positives = 21/52 (40%)
Frame = -1
Query: 839 GGXGXXXGXXXXGXXGRXXGXXXGGGGRGXXXGXXRGXXGAXGXXRGGXQXG 684
GG G G G G G GG RG G RG G G RGG + G
Sbjct: 138 GGRGGFRG----GRGGSRGGF--GGNSRGGFGGGSRGGFG--GGSRGGSRGG 181
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 8.5
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = -2
Query: 511 TISPSLISWSLPNTTTPTLSGSKLRAIPLRXEENSTISSAWMFFKP*TRAIPSPMLKTRP 332
T SPS S S+ +++T + S + P +S+ISS+ P+P +
Sbjct: 584 TSSPSSTSLSISSSSTSSTFSSASTSSPSSI--SSSISSSSTILSS-----PTPSTSSLM 636
Query: 331 VSSRSALGAAPRILSSRM--VEISAAL 257
+SS S + + ILSS + + IS++L
Sbjct: 637 ISSSSIISGSSSILSSSISTIPISSSL 663
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,843,274
Number of Sequences: 5004
Number of extensions: 51906
Number of successful extensions: 443
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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