Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_N17
(855 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 155 1e-37
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 155 1e-37
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 155 1e-37
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 155 1e-37
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 155 1e-37
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 155 1e-37
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 155 1e-37
AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens ... 85 3e-16
BC126146-1|AAI26147.1| 303|Homo sapiens F-box and leucine-rich ... 31 5.3
BC126144-1|AAI26145.1| 303|Homo sapiens F-box and leucine-rich ... 31 5.3
AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein. 31 5.3
AK126722-1|BAC86658.1| 303|Homo sapiens protein ( Homo sapiens ... 31 5.3
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 155 bits (377), Expect = 1e-37
Identities = 68/96 (70%), Positives = 84/96 (87%)
Frame = +2
Query: 77 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 256
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 257 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLAVIE 364
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +++
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLK 96
Score = 107 bits (258), Expect = 4e-23
Identities = 49/76 (64%), Positives = 60/76 (78%)
Frame = +3
Query: 327 PRNPPNSSWQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 506
P+ +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSP
Sbjct: 84 PKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSP 143
Query: 507 CHIEVCLSEREDAVAR 554
CHIE+ L+E+E V +
Sbjct: 144 CHIEMILTEKEQIVPK 159
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 155 bits (377), Expect = 1e-37
Identities = 68/96 (70%), Positives = 84/96 (87%)
Frame = +2
Query: 77 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 256
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 257 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLAVIE 364
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +++
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLK 96
Score = 107 bits (258), Expect = 4e-23
Identities = 49/76 (64%), Positives = 60/76 (78%)
Frame = +3
Query: 327 PRNPPNSSWQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 506
P+ +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSP
Sbjct: 84 PKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSP 143
Query: 507 CHIEVCLSEREDAVAR 554
CHIE+ L+E+E V +
Sbjct: 144 CHIEMILTEKEQIVPK 159
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 155 bits (377), Expect = 1e-37
Identities = 68/96 (70%), Positives = 84/96 (87%)
Frame = +2
Query: 77 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 256
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 257 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLAVIE 364
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +++
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLK 96
Score = 104 bits (250), Expect = 4e-22
Identities = 48/76 (63%), Positives = 59/76 (77%)
Frame = +3
Query: 327 PRNPPNSSWQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 506
P+ +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRA GRINPYMSSP
Sbjct: 84 PKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRARGRINPYMSSP 143
Query: 507 CHIEVCLSEREDAVAR 554
CHIE+ L+E+E V +
Sbjct: 144 CHIEMILTEKEQIVPK 159
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 155 bits (377), Expect = 1e-37
Identities = 68/96 (70%), Positives = 84/96 (87%)
Frame = +2
Query: 77 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 256
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 257 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLAVIE 364
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +++
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLK 96
Score = 107 bits (258), Expect = 4e-23
Identities = 49/76 (64%), Positives = 60/76 (78%)
Frame = +3
Query: 327 PRNPPNSSWQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 506
P+ +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSP
Sbjct: 84 PKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSP 143
Query: 507 CHIEVCLSEREDAVAR 554
CHIE+ L+E+E V +
Sbjct: 144 CHIEMILTEKEQIVPK 159
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 155 bits (377), Expect = 1e-37
Identities = 68/96 (70%), Positives = 84/96 (87%)
Frame = +2
Query: 77 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 256
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 257 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLAVIE 364
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +++
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLK 96
Score = 107 bits (258), Expect = 4e-23
Identities = 49/76 (64%), Positives = 60/76 (78%)
Frame = +3
Query: 327 PRNPPNSSWQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 506
P+ +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSP
Sbjct: 84 PKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSP 143
Query: 507 CHIEVCLSEREDAVAR 554
CHIE+ L+E+E V +
Sbjct: 144 CHIEMILTEKEQIVPK 159
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 155 bits (377), Expect = 1e-37
Identities = 68/96 (70%), Positives = 84/96 (87%)
Frame = +2
Query: 77 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 256
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 257 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLAVIE 364
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +++
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLK 96
Score = 107 bits (258), Expect = 4e-23
Identities = 49/76 (64%), Positives = 60/76 (78%)
Frame = +3
Query: 327 PRNPPNSSWQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 506
P+ +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSP
Sbjct: 84 PKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSP 143
Query: 507 CHIEVCLSEREDAVAR 554
CHIE+ L+E+E V +
Sbjct: 144 CHIEMILTEKEQIVPK 159
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 155 bits (377), Expect = 1e-37
Identities = 68/96 (70%), Positives = 84/96 (87%)
Frame = +2
Query: 77 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 256
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 257 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLAVIE 364
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +++
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLK 96
Score = 107 bits (258), Expect = 4e-23
Identities = 49/76 (64%), Positives = 60/76 (78%)
Frame = +3
Query: 327 PRNPPNSSWQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 506
P+ +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSP
Sbjct: 84 PKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSP 143
Query: 507 CHIEVCLSEREDAVAR 554
CHIE+ L+E+E V +
Sbjct: 144 CHIEMILTEKEQIVPK 159
>AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ27083 fis, clone SPL03425. ).
Length = 136
Score = 85.0 bits (201), Expect = 3e-16
Identities = 41/82 (50%), Positives = 59/82 (71%)
Frame = +3
Query: 291 KQSSLAQHRVAGPRNPPNSSWQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYR 470
+ S A++RVAGP+ N L+ +SNA+ K LD+D L+I+ IQVN+AP + TYR
Sbjct: 9 RPDSGARYRVAGPKRVLNFCCTCLK-MQSNAEFKVLDIDSLIIEPIQVNKAPKMHCWTYR 67
Query: 471 AHGRINPYMSSPCHIEVCLSER 536
AHG+INPY++S CHIE+ L+E+
Sbjct: 68 AHGQINPYVTSACHIEMILTEK 89
>BC126146-1|AAI26147.1| 303|Homo sapiens F-box and leucine-rich
repeat protein 17 protein.
Length = 303
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -3
Query: 664 IFYLTLKVYSLIIFSF*RASFFLESFFFGWASSV---GATLATASSRSLRHTSMWQGD 500
++ ++ K+ + + R S +E+ GW + GATL SS+SLR+ + + D
Sbjct: 199 LYLVSCKITDYALIAIGRYSMTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCD 256
>BC126144-1|AAI26145.1| 303|Homo sapiens F-box and leucine-rich
repeat protein 17 protein.
Length = 303
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -3
Query: 664 IFYLTLKVYSLIIFSF*RASFFLESFFFGWASSV---GATLATASSRSLRHTSMWQGD 500
++ ++ K+ + + R S +E+ GW + GATL SS+SLR+ + + D
Sbjct: 199 LYLVSCKITDYALIAIGRYSMTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCD 256
>AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein.
Length = 198
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 410 ASHRPHSGKSRALPTQTYIPCSRSHQPLHVVSLPHR-SMSQRTRR 541
+S R HS S+ L +Q++ P SRSH P PH S S R+ R
Sbjct: 92 SSRRAHSSWSQNLHSQSHSPHSRSHSPHSRSHSPHSWSHSLRSSR 136
>AK126722-1|BAC86658.1| 303|Homo sapiens protein ( Homo sapiens
cDNA FLJ44768 fis, clone BRACE3032631, highly similar
to Mus musculus F-box protein FBX13. ).
Length = 303
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -3
Query: 664 IFYLTLKVYSLIIFSF*RASFFLESFFFGWASSV---GATLATASSRSLRHTSMWQGD 500
++ ++ K+ + + R S +E+ GW + GATL SS+SLR+ + + D
Sbjct: 199 LYLVSCKITDYALIAIGRYSMTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCD 256
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,346,149
Number of Sequences: 237096
Number of extensions: 2070434
Number of successful extensions: 8516
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8516
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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