Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_N12
         (922 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY310398-1|AAP75619.1| 2213|Homo sapiens sidekick-like protein 1...    37   0.12 
AL133561-1|CAB63715.1|  580|Homo sapiens hypothetical protein pr...    32   2.5  
AL117481-1|CAB55954.1|  319|Homo sapiens hypothetical protein pr...    32   2.5  
BC014114-1|AAH14114.2|  801|Homo sapiens STK11IP protein protein.      31   4.5  

>AY310398-1|AAP75619.1| 2213|Homo sapiens sidekick-like protein 1
           protein.
          Length = 2213

 Score = 36.7 bits (81), Expect = 0.12
 Identities = 20/57 (35%), Positives = 24/57 (42%)
 Frame = -3

Query: 425 RGPRAGALGVAADGAEPPNALAAGARSGDTPQRVNWAILLPIAPRPAHPALSPS*TP 255
           RG R  A G    GAEPP     G   G  P R   ++     P P+ P  +P  TP
Sbjct: 3   RGARPSAAGGGGGGAEPPERAGPGRPRGSPPGRARPSLAPRPGPEPSRPRAAPE-TP 58


>AL133561-1|CAB63715.1|  580|Homo sapiens hypothetical protein
           protein.
          Length = 580

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +3

Query: 477 TRSP-TFFISMTPTTAPTNRLPHSTSDTRHSYIPRSTRASGSGFELI 614
           TRSP T  ++ TP+TA   R+P + S TR S + +   AS    E+I
Sbjct: 533 TRSPPTASLTRTPSTASLTRMPSTASLTRKSNVNQQCPASTPSSEVI 579


>AL117481-1|CAB55954.1|  319|Homo sapiens hypothetical protein
           protein.
          Length = 319

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +3

Query: 477 TRSP-TFFISMTPTTAPTNRLPHSTSDTRHSYIPRSTRASGSGFELI 614
           TRSP T  ++ TP+TA   R+P + S TR S + +   AS    E+I
Sbjct: 272 TRSPPTASLTRTPSTASLTRMPSTASLTRKSNVNQQCPASTPSSEVI 318


>BC014114-1|AAH14114.2|  801|Homo sapiens STK11IP protein protein.
          Length = 801

 Score = 31.5 bits (68), Expect = 4.5
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -1

Query: 397 LQRTARSPPTRSRQGRGQVILPSESTGPFCSPSPHG 290
           L   +R  P R R+   Q + PS S  P C P  HG
Sbjct: 430 LLAVSRGTPNRERKQGEQSLAPSPSASPVCHPPGHG 465


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,157,047
Number of Sequences: 237096
Number of extensions: 2907203
Number of successful extensions: 9722
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9716
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)