Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_N10
         (823 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK027798-1|BAB55376.1|  491|Homo sapiens protein ( Homo sapiens ...    31   3.8  
BC114928-1|AAI14929.1|  562|Homo sapiens TMPRSS13 protein protein.     30   8.8  
AY190317-1|AAO38062.1|  558|Homo sapiens transmembrane protease ...    30   8.8  
AK125190-1|BAC86077.1|  188|Homo sapiens protein ( Homo sapiens ...    30   8.8  
AB048796-1|BAB39741.2|  581|Homo sapiens membrane-type mosaic se...    30   8.8  

>AK027798-1|BAB55376.1|  491|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14892 fis, clone PLACE1004270, weakly similar to
           TRANSMEMBRANE PROTEASE, SERINE 2 (EC 3.4.21.-). ).
          Length = 491

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 30/86 (34%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
 Frame = -3

Query: 389 SPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPVRGTFRAA 222
           SPG   P + SP   + +RASPA A+LS   S +S+   + S   S      VR T   A
Sbjct: 70  SPGRASPAQASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLVRATPVGA 129

Query: 221 PEVPSEFTVKLPA--CLRARVGTCLP 150
             + S      PA    R   GT LP
Sbjct: 130 VPIRSSPARSAPATRATRESPGTSLP 155


>BC114928-1|AAI14929.1|  562|Homo sapiens TMPRSS13 protein protein.
          Length = 562

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 30/85 (35%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
 Frame = -3

Query: 386 PGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPVRGTFRAAP 219
           PG   P R SP   + +RASPA A+LS   S +S+   + S   S      VR T   A 
Sbjct: 66  PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLVRATPVGAV 125

Query: 218 EVPSEFTVKLPA--CLRARVGTCLP 150
            + S      PA    R   GT LP
Sbjct: 126 PIRSSPARSAPATRATRESPGTSLP 150


>AY190317-1|AAO38062.1|  558|Homo sapiens transmembrane protease
           serine 6 protein.
          Length = 558

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 30/85 (35%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
 Frame = -3

Query: 386 PGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPVRGTFRAAP 219
           PG   P R SP   + +RASPA A+LS   S +S+   + S   S      VR T   A 
Sbjct: 66  PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLVRATPVGAV 125

Query: 218 EVPSEFTVKLPA--CLRARVGTCLP 150
            + S      PA    R   GT LP
Sbjct: 126 PIRSSPARSAPATRATRESPGTSLP 150


>AK125190-1|BAC86077.1|  188|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43200 fis, clone FEBRA2007793. ).
          Length = 188

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -2

Query: 435 LWNKLTLPATPSCSP-KPGNAGPGQTQPVPVYVV 337
           LWN+  L + P+  P  P    PG+T+P+PV+ V
Sbjct: 95  LWNRRNLGSCPALWPASPWMLLPGRTEPLPVWPV 128


>AB048796-1|BAB39741.2|  581|Homo sapiens membrane-type mosaic
           serine protease protein.
          Length = 581

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 30/85 (35%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
 Frame = -3

Query: 386 PGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPVRGTFRAAP 219
           PG   P R SP   + +RASPA A+LS   S +S+   + S   S      VR T   A 
Sbjct: 66  PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLVRATPVGAV 125

Query: 218 EVPSEFTVKLPA--CLRARVGTCLP 150
            + S      PA    R   GT LP
Sbjct: 126 PIRSSPARSAPATRATRESPGTSLP 150


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,224,201
Number of Sequences: 237096
Number of extensions: 1922750
Number of successful extensions: 20509
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20503
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)