Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_N08
(872 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 70 2e-12
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 70 2e-12
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 30 2.5
U41016-5|AAP46274.1| 811|Caenorhabditis elegans Hypothetical pr... 29 3.3
U41016-4|AAP46275.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.3
U41016-3|AAM51497.1| 901|Caenorhabditis elegans Hypothetical pr... 29 3.3
U41016-2|AAM51496.1| 899|Caenorhabditis elegans Hypothetical pr... 29 3.3
U97550-3|AAK18981.2| 423|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z37139-9|CAA85493.1| 396|Caenorhabditis elegans Hypothetical pr... 29 5.7
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/88 (36%), Positives = 45/88 (51%)
Frame = +3
Query: 456 ETPCVTASRTVPTRQTPERMVCTNFNETWQSDCEVYRQRCLCLDNSDQCRGPQYHHVQIE 635
E C S+ P VC N N+T+ S C++YR+RCLC S +C V +E
Sbjct: 71 EPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERCLCKRKSKECSKAFNAKVHLE 130
Query: 636 YYGTCREMPDCTESEMSDFPRSHAGLAF 719
Y G C+++ +CTE M+ FP A F
Sbjct: 131 YLGECKKLDECTEEHMAQFPERMADWLF 158
Score = 30.3 bits (65), Expect = 1.9
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 419 CSAGRVCEINEHGDAMCNCIKDCP 490
C G+ C + + G+ C CI CP
Sbjct: 58 CGWGKECVVGKKGEPTCECISKCP 81
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/88 (36%), Positives = 45/88 (51%)
Frame = +3
Query: 456 ETPCVTASRTVPTRQTPERMVCTNFNETWQSDCEVYRQRCLCLDNSDQCRGPQYHHVQIE 635
E C S+ P VC N N+T+ S C++YR+RCLC S +C V +E
Sbjct: 71 EPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERCLCKRKSKECSKAFNAKVHLE 130
Query: 636 YYGTCREMPDCTESEMSDFPRSHAGLAF 719
Y G C+++ +CTE M+ FP A F
Sbjct: 131 YLGECKKLDECTEEHMAQFPERMADWLF 158
Score = 30.3 bits (65), Expect = 1.9
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 419 CSAGRVCEINEHGDAMCNCIKDCP 490
C G+ C + + G+ C CI CP
Sbjct: 58 CGWGKECVVGKKGEPTCECISKCP 81
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +2
Query: 419 CSAGRVCEINEHGDAMCNCIKDCPYETDSRTHGVHKLQRNL 541
CS G C G+ MC C D Y S +++R L
Sbjct: 215 CSGGAACICGARGNCMCECATDFGYTLASDGKTCQRVRRRL 255
>U41016-5|AAP46274.1| 811|Caenorhabditis elegans Hypothetical
protein R11G1.6c protein.
Length = 811
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 447 TNTETPCVTASRTVPTRQTPERMVCTNFN 533
+N PCV R V +++TPERM+ +N++
Sbjct: 131 SNVHLPCVKL-RLVSSQRTPERMIVSNYD 158
>U41016-4|AAP46275.1| 809|Caenorhabditis elegans Hypothetical
protein R11G1.6d protein.
Length = 809
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 447 TNTETPCVTASRTVPTRQTPERMVCTNFN 533
+N PCV R V +++TPERM+ +N++
Sbjct: 131 SNVHLPCVKL-RLVSSQRTPERMIVSNYD 158
>U41016-3|AAM51497.1| 901|Caenorhabditis elegans Hypothetical
protein R11G1.6b protein.
Length = 901
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 447 TNTETPCVTASRTVPTRQTPERMVCTNFN 533
+N PCV R V +++TPERM+ +N++
Sbjct: 221 SNVHLPCVKL-RLVSSQRTPERMIVSNYD 248
>U41016-2|AAM51496.1| 899|Caenorhabditis elegans Hypothetical
protein R11G1.6a protein.
Length = 899
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 447 TNTETPCVTASRTVPTRQTPERMVCTNFN 533
+N PCV R V +++TPERM+ +N++
Sbjct: 221 SNVHLPCVKL-RLVSSQRTPERMIVSNYD 248
>U97550-3|AAK18981.2| 423|Caenorhabditis elegans Hypothetical
protein T20F7.6 protein.
Length = 423
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 371 MKTKKSTWKTLGLKVHCSAGRVCEINEHG 457
++ +S WK + + V + R+C +NEHG
Sbjct: 308 VRDNESFWKAVNVLVDHNVHRLCAVNEHG 336
>Z37139-9|CAA85493.1| 396|Caenorhabditis elegans Hypothetical
protein C14B1.5 protein.
Length = 396
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -2
Query: 568 WRYTSQSDCQVSLKFVHTMRSGVCLVGTVLDAVTHGVSVFV-DFADTSCAAVDFQAKGLP 392
W+ S V+L+F + C++ +L+ T +V + D +C D+ AK +
Sbjct: 41 WKIRSTESKYVALQFPEGLIMYACVIADILEKYTGCDTVIMGDVTYGACCVDDYTAKSMG 100
Query: 391 C 389
C
Sbjct: 101 C 101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,897,065
Number of Sequences: 27780
Number of extensions: 335565
Number of successful extensions: 1077
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -