Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_N06
(895 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc... 30 0.39
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 30 0.51
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 28 2.1
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 2.7
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 27 3.6
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 3.6
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 27 4.8
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 26 6.3
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 26 6.3
SPCC1739.05 |set5||histone lysine methyltransferase Set5 |Schizo... 26 8.3
>SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1428
Score = 30.3 bits (65), Expect = 0.39
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 202 DVLEEVGSVASHHRSLGQSDAGEENYELGGHDVSVERLSAEE 77
D+L + G+ S + GQ E++YE D S+ SAE+
Sbjct: 824 DILSQFGNDKSFGNAAGQDVIEEDDYETDQQDASISNKSAED 865
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 29.9 bits (64), Expect = 0.51
Identities = 22/83 (26%), Positives = 43/83 (51%)
Frame = +2
Query: 284 QQGLEGRLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTXEELRKAHPDVE 463
++ LEG L+ + QRLR + S + + ++AL ++R+ IE EE + +++
Sbjct: 30 KEKLEGDLKTQIKKLQRLRDQIKTWAS-SNDIKDKKALLENRRLIEAKMEEFKAVEREMK 88
Query: 464 KNATALREKLQAAVQNTVQESQK 532
A + +E L A + +E +K
Sbjct: 89 IKAFS-KEGLSIASKLDPKEKEK 110
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 27.9 bits (59), Expect = 2.1
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = +2
Query: 275 TGLQQGLEGRLRVRAATAQRLRQESPG-XRSETRTARPREALEQSRQNIERTXEELRKAH 451
T LQ+ LE + R R QR+R+E E R A EA ++ + ++ E +K
Sbjct: 248 TALQKMLEEK-RAREEEEQRIREEEARIAEEEKRLAEVEEARKEEARLKKKEKERKKKEE 306
Query: 452 PDVE-KNATALREKLQAAVQNTVQESQKLAKKVS 550
+ K + +++ QA Q +Q+ + +V+
Sbjct: 307 MKAQGKYLSKKQKEQQALAQRRLQQMLESGVRVA 340
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/60 (20%), Positives = 28/60 (46%)
Frame = +2
Query: 395 LEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 574
LE+ ++ E + EE+ H + T+ + + + +QE ++ K + Q+ +E
Sbjct: 358 LEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEKIIQEKSRVDKMIDEYRQKLSE 417
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 27.1 bits (57), Expect = 3.6
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = +2
Query: 362 SETRTARPREALEQSR----QNIERTXEEL-RKAHPDVEKNATAL 481
SE ++ P E LE R +I+R EL +K HPD KNA+ L
Sbjct: 26 SELKSLTPYEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQL 70
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.1 bits (57), Expect = 3.6
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +2
Query: 266 KGRTGLQQGLEGRLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIE--RTXEEL 439
K G Q+ LE L T LRQ R+E +T +E LE+ N E + EEL
Sbjct: 246 KSLRGEQERLEKLLVSSNKTVSTLRQTENSLRAECKTL--QEKLEKCAINEEDSKLLEEL 303
Query: 440 RKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPRLITITI 607
K + +A ++KL + + E L K + NEKL +L+ TI
Sbjct: 304 -KHNVANYSDAIVHKDKLIEDLSTRISEFDNL-KSERDTLSIKNEKL-EKLLRNTI 356
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +2
Query: 335 LRQESPGXRSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNT 514
LRQ S ++ + + E E +QN E+ + E+ + +EKL A ++
Sbjct: 46 LRQLSEINEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRK 105
Query: 515 VQESQKL 535
+ S++L
Sbjct: 106 QKLSEEL 112
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/62 (20%), Positives = 33/62 (53%)
Frame = +2
Query: 401 QSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 580
++ Q +E E + P+V++ +EK ++ V+ +E +K+S N++ ++ +
Sbjct: 138 ETSQKVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKE-----EKISRNLRSSSRSI 192
Query: 581 AP 586
+P
Sbjct: 193 SP 194
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 395 LEQSRQNIERTXEELRKAHPDVEK 466
+EQ+R E T E++++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPCC1739.05 |set5||histone lysine methyltransferase Set5
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 319
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +2
Query: 308 RVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTXEELRKAHPD 457
+V+ R+ E+P R+++ EAL + + L AHPD
Sbjct: 24 KVKIPVGTRIFAETPLIRTKSDAKEIEEALSTKTKEEQEAFHRLFNAHPD 73
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,868,926
Number of Sequences: 5004
Number of extensions: 29079
Number of successful extensions: 145
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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