Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_N06
(895 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 35 0.068
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 35 0.068
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 35 0.068
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 35 0.068
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 35 0.068
U29380-18|ABB88224.1| 733|Caenorhabditis elegans Zygote defecti... 35 0.090
U29380-17|AAA68733.3| 736|Caenorhabditis elegans Zygote defecti... 35 0.090
U29380-16|AAS60254.1| 761|Caenorhabditis elegans Zygote defecti... 35 0.090
U29380-15|AAS60253.1| 777|Caenorhabditis elegans Zygote defecti... 35 0.090
AY487140-1|AAR32790.1| 733|Caenorhabditis elegans centrosome at... 35 0.090
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 33 0.36
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 33 0.36
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 33 0.36
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 33 0.36
AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical ... 32 0.64
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 31 0.84
U70855-1|AAB09161.1| 390|Caenorhabditis elegans Hypothetical pr... 31 0.84
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 31 0.84
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 31 0.84
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 31 0.84
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 31 1.5
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 31 1.5
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 31 1.5
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 31 1.5
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 29 3.4
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68117-4|CAA92180.1| 589|Caenorhabditis elegans Hypothetical pr... 29 3.4
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 29 3.4
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 29 3.4
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 29 3.4
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 29 3.4
AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical ... 29 3.4
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 29 3.4
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 29 4.5
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 29 4.5
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 29 4.5
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 29 4.5
AF039720-1|AAB96694.1| 437|Caenorhabditis elegans Hypothetical ... 29 4.5
AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical ... 29 4.5
AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical ... 29 4.5
AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical ... 29 4.5
AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical ... 29 4.5
AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical ... 29 4.5
AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical ... 29 4.5
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 29 5.9
Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical p... 28 7.8
Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical pr... 28 7.8
U50197-4|AAA91257.1| 443|Caenorhabditis elegans Intermediate fi... 28 7.8
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 28 7.8
L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with... 28 7.8
L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with... 28 7.8
AF099925-12|AAC69509.1| 257|Caenorhabditis elegans Hypothetical... 28 7.8
AF025458-6|AAB70980.1| 153|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 35.1 bits (77), Expect = 0.068
Identities = 16/75 (21%), Positives = 38/75 (50%)
Frame = +2
Query: 359 RSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 538
++ ++ + E L++ + + E+LRK V+ + ++ VQE +KL
Sbjct: 2537 KTVSQDLKETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLK 2596
Query: 539 KKVSSNVQETNEKLA 583
++ +N++ET K++
Sbjct: 2597 AEIDANIEETRAKIS 2611
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 35.1 bits (77), Expect = 0.068
Identities = 16/75 (21%), Positives = 38/75 (50%)
Frame = +2
Query: 359 RSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 538
++ ++ + E L++ + + E+LRK V+ + ++ VQE +KL
Sbjct: 2537 KTVSQDLKETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLK 2596
Query: 539 KKVSSNVQETNEKLA 583
++ +N++ET K++
Sbjct: 2597 AEIDANIEETRAKIS 2611
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 35.1 bits (77), Expect = 0.068
Identities = 16/75 (21%), Positives = 38/75 (50%)
Frame = +2
Query: 359 RSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 538
++ ++ + E L++ + + E+LRK V+ + ++ VQE +KL
Sbjct: 351 KTVSQDLKETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLK 410
Query: 539 KKVSSNVQETNEKLA 583
++ +N++ET K++
Sbjct: 411 AEIDANIEETRAKIS 425
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 35.1 bits (77), Expect = 0.068
Identities = 16/75 (21%), Positives = 38/75 (50%)
Frame = +2
Query: 359 RSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 538
++ ++ + E L++ + + E+LRK V+ + ++ VQE +KL
Sbjct: 2537 KTVSQDLKETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLK 2596
Query: 539 KKVSSNVQETNEKLA 583
++ +N++ET K++
Sbjct: 2597 AEIDANIEETRAKIS 2611
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 35.1 bits (77), Expect = 0.068
Identities = 16/75 (21%), Positives = 38/75 (50%)
Frame = +2
Query: 359 RSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 538
++ ++ + E L++ + + E+LRK V+ + ++ VQE +KL
Sbjct: 2537 KTVSQDLKETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLK 2596
Query: 539 KKVSSNVQETNEKLA 583
++ +N++ET K++
Sbjct: 2597 AEIDANIEETRAKIS 2611
>U29380-18|ABB88224.1| 733|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform d protein.
Length = 733
Score = 34.7 bits (76), Expect = 0.090
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +2
Query: 359 RSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 538
++E + REA ++ N + E L+K ++E NATAL +K +A + S+ ++
Sbjct: 584 KAEVEAQQMREAKMRAETNQAQVDEILKKRTAELEVNATAL-QKAKAVIDELEYNSRPVS 642
Query: 539 KKVSSNVQ------ETNEKLAPRLITITIK 610
+ ++VQ E NEKL ++ + I+
Sbjct: 643 EDSMTSVQAFKEMKEENEKLRQKVEKLEIE 672
>U29380-17|AAA68733.3| 736|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform a protein.
Length = 736
Score = 34.7 bits (76), Expect = 0.090
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +2
Query: 359 RSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 538
++E + REA ++ N + E L+K ++E NATAL +K +A + S+ ++
Sbjct: 587 KAEVEAQQMREAKMRAETNQAQVDEILKKRTAELEVNATAL-QKAKAVIDELEYNSRPVS 645
Query: 539 KKVSSNVQ------ETNEKLAPRLITITIK 610
+ ++VQ E NEKL ++ + I+
Sbjct: 646 EDSMTSVQAFKEMKEENEKLRQKVEKLEIE 675
>U29380-16|AAS60254.1| 761|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform c protein.
Length = 761
Score = 34.7 bits (76), Expect = 0.090
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +2
Query: 359 RSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 538
++E + REA ++ N + E L+K ++E NATAL +K +A + S+ ++
Sbjct: 587 KAEVEAQQMREAKMRAETNQAQVDEILKKRTAELEVNATAL-QKAKAVIDELEYNSRPVS 645
Query: 539 KKVSSNVQ------ETNEKLAPRLITITIK 610
+ ++VQ E NEKL ++ + I+
Sbjct: 646 EDSMTSVQAFKEMKEENEKLRQKVEKLEIE 675
>U29380-15|AAS60253.1| 777|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform b protein.
Length = 777
Score = 34.7 bits (76), Expect = 0.090
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +2
Query: 359 RSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 538
++E + REA ++ N + E L+K ++E NATAL +K +A + S+ ++
Sbjct: 587 KAEVEAQQMREAKMRAETNQAQVDEILKKRTAELEVNATAL-QKAKAVIDELEYNSRPVS 645
Query: 539 KKVSSNVQ------ETNEKLAPRLITITIK 610
+ ++VQ E NEKL ++ + I+
Sbjct: 646 EDSMTSVQAFKEMKEENEKLRQKVEKLEIE 675
>AY487140-1|AAR32790.1| 733|Caenorhabditis elegans centrosome
attachment protein A protein.
Length = 733
Score = 34.7 bits (76), Expect = 0.090
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +2
Query: 359 RSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 538
++E + REA ++ N + E L+K ++E NATAL +K +A + S+ ++
Sbjct: 584 KAEVEAQQMREAKMRAETNQAQVDEILKKRTAELEVNATAL-QKAKAVIDELEYNSRPVS 642
Query: 539 KKVSSNVQ------ETNEKLAPRLITITIK 610
+ ++VQ E NEKL ++ + I+
Sbjct: 643 EDSMTSVQAFKEMKEENEKLRQKVEKLEIE 672
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +2
Query: 377 ARPREALEQSRQNIERTXEELRKAHPDVEKNATAL---REKLQAAVQNTVQESQKLAKKV 547
A+ EA E++R+N E ELR+ + D+ + +AL R KL+ + E +++A ++
Sbjct: 1702 AQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIANEL 1761
Query: 548 SSNVQE 565
+ V++
Sbjct: 1762 KNAVEQ 1767
Score = 32.3 bits (70), Expect = 0.48
Identities = 24/90 (26%), Positives = 35/90 (38%)
Frame = +2
Query: 320 ATAQRLRQESPGXRSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKLQA 499
ATA +L + E A+ R E+ N E LRK H D T E LQ
Sbjct: 1169 ATAAQLEANK---KREAEIAKLRREKEEDSLNHETAISSLRKRHGDSVAELTEQLETLQK 1225
Query: 500 AVQNTVQESQKLAKKVSSNVQETNEKLAPR 589
+ E KL + + + T+ ++ R
Sbjct: 1226 LKAKSEAEKSKLQRDLEESQHATDSEVRSR 1255
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +2
Query: 386 REALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQE 565
R LEQ +E + +++ D+EK + L+ A +N + E K V + ++
Sbjct: 1037 RNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQEN-IDEITKQKHDVETTLKR 1095
Query: 566 TNEKL 580
E L
Sbjct: 1096 KEEDL 1100
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 32.7 bits (71), Expect = 0.36
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +2
Query: 281 LQQGLEGRLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIE----RTXEELRKA 448
L++ E R+R++ +R+RQE +E R R E+ ++ +E R EE +
Sbjct: 2637 LRKEAEERMRIQRENEERVRQEQMRLEAEERERIRRAEEERIQKELEDKVRREKEEAARQ 2696
Query: 449 HPDVEKNATALREKLQAAVQNTVQESQKLAKK 544
+ ++ +RE +A + E Q+ +++
Sbjct: 2697 EKERQEQEARMREAREAELSRQRMEQQRRSQQ 2728
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +2
Query: 377 ARPREALEQSRQNIERTXEELRKAHPDVEKNATAL---REKLQAAVQNTVQESQKLAKKV 547
A+ EA E++R+N E ELR+ + D+ + +AL R KL+ + E +++A ++
Sbjct: 1702 AQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIANEL 1761
Query: 548 SSNVQE 565
+ V++
Sbjct: 1762 KNAVEQ 1767
Score = 32.3 bits (70), Expect = 0.48
Identities = 24/90 (26%), Positives = 35/90 (38%)
Frame = +2
Query: 320 ATAQRLRQESPGXRSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKLQA 499
ATA +L + E A+ R E+ N E LRK H D T E LQ
Sbjct: 1169 ATAAQLEANK---KREAEIAKLRREKEEDSLNHETAISSLRKRHGDSVAELTEQLETLQK 1225
Query: 500 AVQNTVQESQKLAKKVSSNVQETNEKLAPR 589
+ E KL + + + T+ ++ R
Sbjct: 1226 LKAKSEAEKSKLQRDLEESQHATDSEVRSR 1255
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +2
Query: 386 REALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQE 565
R LEQ +E + +++ D+EK + L+ A +N + E K V + ++
Sbjct: 1037 RNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQEN-IDEITKQKHDVETTLKR 1095
Query: 566 TNEKL 580
E L
Sbjct: 1096 KEEDL 1100
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 32.7 bits (71), Expect = 0.36
Identities = 22/98 (22%), Positives = 46/98 (46%)
Frame = +2
Query: 287 QGLEGRLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTXEELRKAHPDVEK 466
+ L RL+ + + + + E++ R L+ + +E+ EEL+K+H +
Sbjct: 693 EDLADRLQAAQILSGNVESKFSDMQKESKIEMER-ILDNHNKELEKLREELKKSHTEHTS 751
Query: 467 NATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 580
+ L E+ Q +Q+ + K+ SSN+ N+K+
Sbjct: 752 LESVLEEQQNELAQ--LQDQLREEKEQSSNLLVLNQKI 787
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 32.7 bits (71), Expect = 0.36
Identities = 22/98 (22%), Positives = 46/98 (46%)
Frame = +2
Query: 287 QGLEGRLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTXEELRKAHPDVEK 466
+ L RL+ + + + + E++ R L+ + +E+ EEL+K+H +
Sbjct: 693 EDLADRLQAAQILSGNVESKFSDMQKESKIEMER-ILDNHNKELEKLREELKKSHTEHTS 751
Query: 467 NATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 580
+ L E+ Q +Q+ + K+ SSN+ N+K+
Sbjct: 752 LESVLEEQQNELAQ--LQDQLREEKEQSSNLLVLNQKI 787
>AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical
protein Y54E10A.12 protein.
Length = 547
Score = 31.9 bits (69), Expect = 0.64
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +2
Query: 392 ALEQSRQNIERTXEELRKAHPDVEKNATALREKLQ------AAVQNTVQESQKLAKKVSS 553
+L++ + + E+T L K +EK+ LRE+ Q A VQ ESQ+ ++
Sbjct: 141 SLKEEKASFEKTQSALLKEKGKIEKDKLMLREEAQKQASMNAEVQKKELESQERLSVLNK 200
Query: 554 NVQETNEK 577
E NEK
Sbjct: 201 QFMEENEK 208
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 31.5 bits (68), Expect = 0.84
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 320 ATAQRLRQESPGXRSETRTARP--REALEQSRQNIERTXEELRKAHPDVEKNATALREKL 493
AT++ LR E S+ ++ R A E+ +N+ER E + D+E+ + + + +
Sbjct: 825 ATSESLRTECENLNSKIQSIEESRRHAEEKGSENLERMITEKSRLEKDIEERESTI-QSI 883
Query: 494 QAAVQNTVQESQKL 535
Q A++ E + L
Sbjct: 884 QEALETKDNEIESL 897
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 31.5 bits (68), Expect = 0.84
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 320 ATAQRLRQESPGXRSETRTARP--REALEQSRQNIERTXEELRKAHPDVEKNATALREKL 493
AT++ LR E S+ ++ R A E+ +N+ER E + D+E+ + + + +
Sbjct: 827 ATSESLRTECENLNSKIQSIEESRRHAEEKGSENLERMITEKSRLEKDIEERESTI-QSI 885
Query: 494 QAAVQNTVQESQKL 535
Q A++ E + L
Sbjct: 886 QEALETKDNEIESL 899
>U70855-1|AAB09161.1| 390|Caenorhabditis elegans Hypothetical
protein K08F11.3 protein.
Length = 390
Score = 31.5 bits (68), Expect = 0.84
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -1
Query: 418 DVLPRLFQSLPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSCASFDLVSELNC 242
+V P+ ++ W + + L K S T E F+AL+ CA L+ EL C
Sbjct: 92 NVAPQFYKGTGWASHAGIAVRVLSNLYKGYSNFHTVQEKIFKALVDMCAEARLIGELEC 150
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 31.5 bits (68), Expect = 0.84
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 320 ATAQRLRQESPGXRSETRTARP--REALEQSRQNIERTXEELRKAHPDVEKNATALREKL 493
AT++ LR E S+ ++ R A E+ +N+ER E + D+E+ + + + +
Sbjct: 827 ATSESLRTECENLNSKIQSIEESRRHAEEKGSENLERMITEKSRLEKDIEERESTI-QSI 885
Query: 494 QAAVQNTVQESQKL 535
Q A++ E + L
Sbjct: 886 QEALETKDNEIESL 899
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 31.5 bits (68), Expect = 0.84
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Frame = +2
Query: 386 REALEQSRQNIERTXEELRKAHPDVEKNATALRE-KLQAAVQNT-----VQESQKLAKKV 547
+EAL +QN ER EL+K ++++ +E K + A +N+ VQE+Q L +K+
Sbjct: 179 KEALAAEKQNSEREKMELKKLTEELQRMNLENKELKNRVASENSRATGAVQEAQVLQEKL 238
Query: 548 SSNVQETNEK 577
++ +EK
Sbjct: 239 QQALKALDEK 248
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 31.5 bits (68), Expect = 0.84
Identities = 23/89 (25%), Positives = 45/89 (50%)
Frame = +2
Query: 329 QRLRQESPGXRSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQ 508
+R ++ S G + + P A +Q+++ ++T + R ++E A+R +L+ V
Sbjct: 104 KREKEFSNGGKRSADGSTPMTAAQQAKK--KKTDQ--RNFKEEIE----AIRRQLEKEVN 155
Query: 509 NTVQESQKLAKKVSSNVQETNEKLAPRLI 595
V++ L K Q++ EKL PRL+
Sbjct: 156 EEVKQKATLMKTEREKHQKSQEKLTPRLL 184
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +2
Query: 335 LRQESPGXRSETRTARPREALEQSRQN-IERTXEELRKAHPDVE--KNATALREKLQAAV 505
L +E + + R R ++ R++ +++ +ELRKA + + +EKL +V
Sbjct: 375 LEKEEKRRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISV 434
Query: 506 QNTVQESQKLAKK 544
QN++ E+ + K+
Sbjct: 435 QNSLNEAHRQHKQ 447
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +2
Query: 335 LRQESPGXRSETRTARPREALEQSRQN-IERTXEELRKAHPDVE--KNATALREKLQAAV 505
L +E + + R R ++ R++ +++ +ELRKA + + +EKL +V
Sbjct: 375 LEKEEKRRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISV 434
Query: 506 QNTVQESQKLAKK 544
QN++ E+ + K+
Sbjct: 435 QNSLNEAHRQHKQ 447
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +2
Query: 335 LRQESPGXRSETRTARPREALEQSRQN-IERTXEELRKAHPDVE--KNATALREKLQAAV 505
L +E + + R R ++ R++ +++ +ELRKA + + +EKL +V
Sbjct: 135 LEKEEKRRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISV 194
Query: 506 QNTVQESQKLAKK 544
QN++ E+ + K+
Sbjct: 195 QNSLNEAHRQHKQ 207
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +2
Query: 335 LRQESPGXRSETRTARPREALEQSRQN-IERTXEELRKAHPDVE--KNATALREKLQAAV 505
L +E + + R R ++ R++ +++ +ELRKA + + +EKL +V
Sbjct: 375 LEKEEKRRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISV 434
Query: 506 QNTVQESQKLAKK 544
QN++ E+ + K+
Sbjct: 435 QNSLNEAHRQHKQ 447
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +2
Query: 359 RSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKL---QAAVQNTVQESQ 529
+ E A+ R LE++ N E LRK H D T ++L +A V+ ++
Sbjct: 1175 KREAELAKLRRDLEEANMNHENQLGGLRKKHTDAVAELTDQLDQLNKAKAKVEKDKAQAV 1234
Query: 530 KLAKKVSSNV-QETNEKL 580
+ A+ +++ + QET+ KL
Sbjct: 1235 RDAEDLAAQLDQETSGKL 1252
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +2
Query: 359 RSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKL---QAAVQNTVQESQ 529
+ E A+ R LE++ N E LRK H D T ++L +A V+ ++
Sbjct: 1175 KREAELAKLRRDLEEANMNHENQLGGLRKKHTDAVAELTDQLDQLNKAKAKVEKDKAQAV 1234
Query: 530 KLAKKVSSNV-QETNEKL 580
+ A+ +++ + QET+ KL
Sbjct: 1235 RDAEDLAAQLDQETSGKL 1252
>Z68117-4|CAA92180.1| 589|Caenorhabditis elegans Hypothetical
protein F45E6.2 protein.
Length = 589
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = +2
Query: 326 AQRLRQESPGXRSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAV 505
A + + E RS RT + + L+ NI+ E++++ D++K A+ +R+K
Sbjct: 464 AVQKKSEQAALRSRERTWKQLDLLKTGN-NIQLDNEKIQRKRQDIDKIASIVRQKGDTLY 522
Query: 506 QNTVQE 523
T+Q+
Sbjct: 523 IMTLQD 528
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -1
Query: 442 AELLXRALDVLPRLFQSLPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSC 275
AEL +AL+ L L QS+P C L + L D+ PS + SC
Sbjct: 161 AELCVQALESLLSLIQSMPIDCLQSENRLSMSAMMHVLKTLREDACPSVSSKATSC 216
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +1
Query: 67 RFASPPHSVSRQIHHGRQVRSSLRLHRSGPR--SDGATR--RSRLLQGHRTP 210
R PP S SR+ + RSSL HR+ R SDG R RS + HR P
Sbjct: 348 RPTEPPPSYSREDPYRSTSRSSLSRHRNRSRSPSDGMDRSGRSSSRRTHRRP 399
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +1
Query: 67 RFASPPHSVSRQIHHGRQVRSSLRLHRSGPR--SDGATR--RSRLLQGHRTP 210
R PP S SR+ + RSSL HR+ R SDG R RS + HR P
Sbjct: 348 RPTEPPPSYSREDPYRSTSRSSLSRHRNRSRSPSDGMDRSGRSSSRRTHRRP 399
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +2
Query: 359 RSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKL---QAAVQNTVQESQ 529
+ E A+ R LE++ N E LRK H D T ++L +A V+ ++
Sbjct: 1178 KREAELAKLRRDLEEANMNHENQLGGLRKKHTDAVAELTDQLDQLNKAKAKVEKDKAQAV 1237
Query: 530 KLAKKVSSNV-QETNEKL 580
+ A+ +++ + QET+ KL
Sbjct: 1238 RDAEDLAAQLDQETSGKL 1255
>AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical
protein Y39H10B.2 protein.
Length = 232
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/111 (20%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Frame = +2
Query: 287 QGLEGRLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTXEELRKAHPDVEK 466
+ + +++ + QR+ QE E R R + +L+ S E ++ +K + EK
Sbjct: 80 EAMISQMKTQTEEFQRIVQELKDDADERRN-RAQTSLDNSEY--ETLVQQRQKLIENSEK 136
Query: 467 NATALREKLQAAVQ---NTVQESQKLAKKVSSNVQETNEKLAPRLITITIK 610
+ +E+L+ V+ + ++++ + +QETNE++ +L + K
Sbjct: 137 SQQETKEQLEKIVELQRKSCDQNKEKFTALELQLQETNERMQKQLDELNAK 187
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -1
Query: 442 AELLXRALDVLPRLFQSLPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSC 275
AEL +AL+ L L QS+P C L + L D+ PS + SC
Sbjct: 161 AELCVQALESLLSLIQSMPIDCLQSENRLSMSAMMHVLKTLREDACPSVSSKATSC 216
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/92 (22%), Positives = 41/92 (44%)
Frame = +2
Query: 302 RLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATAL 481
R R+ +R+R+E E R R A E+ R+ + EE+ + + ++++ A A
Sbjct: 587 RDRLDEMERERVREEEERREKERREQERRIAAEKERKRRQEEEEEIARLN-ELQRAAAAR 645
Query: 482 REKLQAAVQNTVQESQKLAKKVSSNVQETNEK 577
+ + A + Q + K + +E EK
Sbjct: 646 QAQRNAELDRQRQRDELDRKAQELSEREMREK 677
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/93 (24%), Positives = 41/93 (44%)
Frame = +2
Query: 302 RLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATAL 481
R R+ +R R+E + + REA ++ RQ +E E+R+ E+ A
Sbjct: 457 RERLELERIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRRE---EERREA- 512
Query: 482 REKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 580
+L A V +E ++L K+ E E++
Sbjct: 513 --ELVADVHRQAEERERLRKRQEREEAERLERI 543
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/92 (22%), Positives = 41/92 (44%)
Frame = +2
Query: 302 RLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATAL 481
R R+ +R+R+E E R R A E+ R+ + EE+ + + ++++ A A
Sbjct: 587 RDRLDEMERERVREEEERREKERREQERRIAAEKERKRRQEEEEEIARLN-ELQRAAAAR 645
Query: 482 REKLQAAVQNTVQESQKLAKKVSSNVQETNEK 577
+ + A + Q + K + +E EK
Sbjct: 646 QAQRNAELDRQRQRDELDRKAQELSEREMREK 677
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/93 (24%), Positives = 41/93 (44%)
Frame = +2
Query: 302 RLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATAL 481
R R+ +R R+E + + REA ++ RQ +E E+R+ E+ A
Sbjct: 457 RERLELERIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRRE---EERREA- 512
Query: 482 REKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 580
+L A V +E ++L K+ E E++
Sbjct: 513 --ELVADVHRQAEERERLRKRQEREEAERLERI 543
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/92 (22%), Positives = 41/92 (44%)
Frame = +2
Query: 302 RLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATAL 481
R R+ +R+R+E E R R A E+ R+ + EE+ + + ++++ A A
Sbjct: 587 RDRLDEMERERVREEEERREKERREQERRIAAEKERKRRQEEEEEIARLN-ELQRAAAAR 645
Query: 482 REKLQAAVQNTVQESQKLAKKVSSNVQETNEK 577
+ + A + Q + K + +E EK
Sbjct: 646 QAQRNAELDRQRQRDELDRKAQELSEREMREK 677
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/93 (24%), Positives = 41/93 (44%)
Frame = +2
Query: 302 RLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATAL 481
R R+ +R R+E + + REA ++ RQ +E E+R+ E+ A
Sbjct: 457 RERLELERIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRRE---EERREA- 512
Query: 482 REKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 580
+L A V +E ++L K+ E E++
Sbjct: 513 --ELVADVHRQAEERERLRKRQEREEAERLERI 543
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/92 (22%), Positives = 41/92 (44%)
Frame = +2
Query: 302 RLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATAL 481
R R+ +R+R+E E R R A E+ R+ + EE+ + + ++++ A A
Sbjct: 587 RDRLDEMERERVREEEERREKERREQERRIAAEKERKRRQEEEEEIARLN-ELQRAAAAR 645
Query: 482 REKLQAAVQNTVQESQKLAKKVSSNVQETNEK 577
+ + A + Q + K + +E EK
Sbjct: 646 QAQRNAELDRQRQRDELDRKAQELSEREMREK 677
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/93 (24%), Positives = 41/93 (44%)
Frame = +2
Query: 302 RLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATAL 481
R R+ +R R+E + + REA ++ RQ +E E+R+ E+ A
Sbjct: 457 RERLELERIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRRE---EERREA- 512
Query: 482 REKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 580
+L A V +E ++L K+ E E++
Sbjct: 513 --ELVADVHRQAEERERLRKRQEREEAERLERI 543
>AF039720-1|AAB96694.1| 437|Caenorhabditis elegans Hypothetical
protein F33D11.5 protein.
Length = 437
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +2
Query: 353 GXRSETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQESQK 532
G R + +P+E ++ + + + EE+RK +P+ EK T + L+ +NT +
Sbjct: 289 GRRINFKRRQPKEQMDVQVKELLKIIEEIRKRYPEKEKITTL--DILEYMHENTANDKLN 346
Query: 533 LAKKVSSNVQETNE 574
+ + + +T E
Sbjct: 347 ERRDTIAFMPQTME 360
>AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical
protein C04C3.5a protein.
Length = 331
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +2
Query: 431 EELRKAHPDVEKNATALREK---LQAAVQNTVQESQKLAKK---VSSNVQETNEKL 580
E + + H A L E LQA VQN QE+++L+ K V+S+ E +EK+
Sbjct: 87 EFISQQHERAASRAVPLAEAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKI 142
>AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical
protein C04C3.5c protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +2
Query: 431 EELRKAHPDVEKNATALREK---LQAAVQNTVQESQKLAKK---VSSNVQETNEKL 580
E + + H A L E LQA VQN QE+++L+ K V+S+ E +EK+
Sbjct: 149 EFISQQHERAASRAVPLAEAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKI 204
>AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical
protein C04C3.5b protein.
Length = 404
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +2
Query: 431 EELRKAHPDVEKNATALREK---LQAAVQNTVQESQKLAKK---VSSNVQETNEKL 580
E + + H A L E LQA VQN QE+++L+ K V+S+ E +EK+
Sbjct: 160 EFISQQHERAASRAVPLAEAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKI 215
>AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical
protein protein.
Length = 331
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +2
Query: 431 EELRKAHPDVEKNATALREK---LQAAVQNTVQESQKLAKK---VSSNVQETNEKL 580
E + + H A L E LQA VQN QE+++L+ K V+S+ E +EK+
Sbjct: 87 EFISQQHERAASRAVPLAEAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKI 142
>AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical
protein protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +2
Query: 431 EELRKAHPDVEKNATALREK---LQAAVQNTVQESQKLAKK---VSSNVQETNEKL 580
E + + H A L E LQA VQN QE+++L+ K V+S+ E +EK+
Sbjct: 149 EFISQQHERAASRAVPLAEAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKI 204
>AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical
protein protein.
Length = 404
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +2
Query: 431 EELRKAHPDVEKNATALREK---LQAAVQNTVQESQKLAKK---VSSNVQETNEKL 580
E + + H A L E LQA VQN QE+++L+ K V+S+ E +EK+
Sbjct: 160 EFISQQHERAASRAVPLAEAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKI 215
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 28.7 bits (61), Expect = 5.9
Identities = 23/99 (23%), Positives = 44/99 (44%)
Frame = +2
Query: 287 QGLEGRLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTXEELRKAHPDVEK 466
QG+EG+LRV+ Q L ++ + + L + + + +RK H E
Sbjct: 251 QGIEGKLRVK---EQELVAAGKAVKNNEEHEKELKLLRSTNSSFSTELKTIRKEH---EA 304
Query: 467 NATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLA 583
+E+ + + QE +KL + + ++T+ KLA
Sbjct: 305 QLQKKQEEWKKLHEQLEQEKEKLISE-KEHAKQTHLKLA 342
>Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical
protein T05G5.9b protein.
Length = 658
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 455 DVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 580
+++KN TAL EKL+A + Q KK + N++ NEKL
Sbjct: 45 EMKKNQTALMEKLKAKMSELEQ-----VKKDAENLKLINEKL 81
>Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical
protein T05G5.9a protein.
Length = 660
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 455 DVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 580
+++KN TAL EKL+A + Q KK + N++ NEKL
Sbjct: 45 EMKKNQTALMEKLKAKMSELEQ-----VKKDAENLKLINEKL 81
>U50197-4|AAA91257.1| 443|Caenorhabditis elegans Intermediate
filament, d protein 2 protein.
Length = 443
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +2
Query: 395 LEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 574
+ +++ I + +RK PDV L Q VQ +E ++ K+ SN++ N
Sbjct: 116 VRENKAKISTAEQNIRKLEPDVISAKKNLESSFQLRVQ--TREDKRSQMKILSNLEAENS 173
Query: 575 KLAPRLIT 598
+ RL T
Sbjct: 174 YI-KRLTT 180
>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
potassium channelsprotein 2 protein.
Length = 1564
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/56 (23%), Positives = 28/56 (50%)
Frame = +2
Query: 410 QNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEK 577
+N+++ + ++K KN + +K + + QK+ KK + NVQ+ +K
Sbjct: 1276 KNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKCAKNVQKMCKKCAKNVQKMCKK 1331
>L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
b protein.
Length = 926
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 272 RTGLQQGLEGRLRVRAATAQRLRQESPGXRSETRTARPREALE--QSRQN 415
R + G E RLR++ A R R E+PG + T + E +E RQN
Sbjct: 560 RKSIAVGGENRLRLKTFIAGRNRLENPGAHALAATFKALETVEWFDVRQN 609
>L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
a protein.
Length = 960
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 272 RTGLQQGLEGRLRVRAATAQRLRQESPGXRSETRTARPREALE--QSRQN 415
R + G E RLR++ A R R E+PG + T + E +E RQN
Sbjct: 597 RKSIAVGGENRLRLKTFIAGRNRLENPGAHALAATFKALETVEWFDVRQN 646
>AF099925-12|AAC69509.1| 257|Caenorhabditis elegans Hypothetical
protein K01A2.10 protein.
Length = 257
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +2
Query: 389 EALEQSRQNIERTXEELRKAHPDVEKNAT---ALREKLQAAVQNTVQESQKLAKKVSSNV 559
E E+ R+ + + K ++EK T A + L+ V T+Q+ Q+ S +
Sbjct: 99 ELREEKRKTLHGDDDSADKI-AELEKVITEKEAYTKNLEKKVSTTIQKLQEQITIQSDRI 157
Query: 560 QETNEKLAPRLITIT 604
++ NE+L+ R T+T
Sbjct: 158 RQLNEELSDRNQTVT 172
>AF025458-6|AAB70980.1| 153|Caenorhabditis elegans Hypothetical
protein C01B12.8 protein.
Length = 153
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/61 (29%), Positives = 36/61 (59%)
Frame = +2
Query: 362 SETRTARPREALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAK 541
++ +T+ PR +L++S + E T +L A ++NA A++ +A + ++ +KLAK
Sbjct: 80 AKRKTSTPR-SLKKSSRCREMTESDLELAK---KRNADAMKHLREAKKKKEKEQEEKLAK 135
Query: 542 K 544
K
Sbjct: 136 K 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,634,351
Number of Sequences: 27780
Number of extensions: 173323
Number of successful extensions: 940
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -