Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_N03
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 130 5e-30
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 130 5e-30
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 130 5e-30
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 130 5e-30
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 130 5e-30
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 130 5e-30
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 130 5e-30
AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens ... 47 8e-05
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 130 bits (315), Expect = 5e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 84 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 263
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 264 RRFNGGVGRCAQAKQFGTTQG 326
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 85.8 bits (203), Expect = 2e-16
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +1
Query: 328 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYR 477
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYR
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYR 131
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 130 bits (315), Expect = 5e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 84 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 263
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 264 RRFNGGVGRCAQAKQFGTTQG 326
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 85.8 bits (203), Expect = 2e-16
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +1
Query: 328 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYR 477
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYR
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYR 131
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 130 bits (315), Expect = 5e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 84 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 263
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 264 RRFNGGVGRCAQAKQFGTTQG 326
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 85.8 bits (203), Expect = 2e-16
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +1
Query: 328 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYR 477
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYR
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYR 131
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 130 bits (315), Expect = 5e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 84 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 263
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 264 RRFNGGVGRCAQAKQFGTTQG 326
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 85.8 bits (203), Expect = 2e-16
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +1
Query: 328 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYR 477
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYR
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYR 131
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 130 bits (315), Expect = 5e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 84 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 263
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 264 RRFNGGVGRCAQAKQFGTTQG 326
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 85.8 bits (203), Expect = 2e-16
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +1
Query: 328 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYR 477
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYR
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYR 131
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 130 bits (315), Expect = 5e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 84 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 263
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 264 RRFNGGVGRCAQAKQFGTTQG 326
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 85.8 bits (203), Expect = 2e-16
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +1
Query: 328 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYR 477
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYR
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYR 131
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 130 bits (315), Expect = 5e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 84 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 263
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 264 RRFNGGVGRCAQAKQFGTTQG 326
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 85.8 bits (203), Expect = 2e-16
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +1
Query: 328 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYR 477
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYR
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYR 131
>AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ27083 fis, clone SPL03425. ).
Length = 136
Score = 47.2 bits (107), Expect = 8e-05
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +1
Query: 298 KQSSLAQHRXRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYR 477
+ S A++R PK+ F L+ +SNA+ K LD+D L+I+ IQVN+AP + TYR
Sbjct: 9 RPDSGARYRVAGPKRVLNFCCTCLK-MQSNAEFKVLDIDSLIIEPIQVNKAPKMHCWTYR 67
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,122,337
Number of Sequences: 237096
Number of extensions: 1805668
Number of successful extensions: 7802
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7802
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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