Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_N01
         (1044 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X86019-1|CAA60014.1|  494|Homo sapiens SH3-domain interacting pr...    33   1.3  
AF031588-1|AAC03767.1|  503|Homo sapiens WASP interacting protei...    33   1.3  

>X86019-1|CAA60014.1|  494|Homo sapiens SH3-domain interacting
           protein protein.
          Length = 494

 Score = 33.5 bits (73), Expect = 1.3
 Identities = 21/62 (33%), Positives = 27/62 (43%)
 Frame = +1

Query: 382 RPSCPKXXVGSXPNVXRXYXXNXPPXXXLPXYPXPXTPAPXSPXRXXPXLQXXXPP*LGX 561
           +P  P   VG+ P++ R      PP    P  P P TP P +P R  P L+   P   G 
Sbjct: 263 KPPPPPPPVGNRPSIHREAVPPPPPQNNKP--PVPSTPRPSAPHR--PHLRPPPPSRPGP 318

Query: 562 LP 567
            P
Sbjct: 319 PP 320


>AF031588-1|AAC03767.1|  503|Homo sapiens WASP interacting protein
           protein.
          Length = 503

 Score = 33.5 bits (73), Expect = 1.3
 Identities = 21/62 (33%), Positives = 27/62 (43%)
 Frame = +1

Query: 382 RPSCPKXXVGSXPNVXRXYXXNXPPXXXLPXYPXPXTPAPXSPXRXXPXLQXXXPP*LGX 561
           +P  P   VG+ P++ R      PP    P  P P TP P +P R  P L+   P   G 
Sbjct: 263 KPPPPPPPVGNRPSIHREAVPPPPPQNNKP--PVPSTPRPSAPHR--PHLRPPPPSRPGP 318

Query: 562 LP 567
            P
Sbjct: 319 PP 320


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,100,559
Number of Sequences: 237096
Number of extensions: 865277
Number of successful extensions: 1602
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1544
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14152531456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)