Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_M24
(955 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.015
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 34 0.026
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.034
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.059
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.24
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.32
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.32
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.55
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.73
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 28 2.2
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 5.1
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 5.1
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 5.1
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 5.1
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 6.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.1 bits (77), Expect = 0.015
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = +2
Query: 866 PPXXPXX---PPPXXPXXXXXXXPPPPPPPP 949
PP P PPP P PPPPPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 34.3 bits (75), Expect = 0.026
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +3
Query: 828 PRPXXPPSRPXPXPXNXXXXPPRXXPXXPXSXPPPPXPPP 947
P P P P P P PP P + PPPP PPP
Sbjct: 744 PAPAPIPV-PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 34.3 bits (75), Expect = 0.026
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 887 PPPXXPXXXXXXXPPPPPPPP 949
PPP P PPPPPPPP
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPP 783
Score = 31.9 bits (69), Expect = 0.14
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +2
Query: 518 LIPXXPPPPPXXXXXXPPXXXPXPPXXGXPPFXGRXTXPPXXXXXTXVXXGPPPTP 685
L+ PPPPP P P P P G PP GPPP P
Sbjct: 727 LLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGG---PPPPPPPPGVAGAGPPPPP 779
Score = 31.1 bits (67), Expect = 0.24
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 869 PXXPXXPPPXXPXXXXXXXPPPPPPPP 949
P P P P PPPPPPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 30.7 bits (66), Expect = 0.32
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +2
Query: 512 LXLIPXXPPPPPXXXXXXPPXXXPXPPXXGXPPFXGRXTXPPXXXXXTXVXXGPPPTP 685
L L PPPP P P PP P G PP PPP P
Sbjct: 727 LLLKSPPPPPPAVIVPTPAPAPIPVPP---PAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 30.3 bits (65), Expect = 0.42
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 524 PXXPPPPPXXXXXXPPXXXPXPP 592
P PPPPP PP P PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.73
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +3
Query: 567 PPXPXPXXXXXXXXLSXAGXLXPPPXXXXPXXXSGPPPPPXXXXPPXPPXXXPP 728
PP P P + A PPP PPPP P PP PP
Sbjct: 732 PPPPPPAVIVPTP--APAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.97
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Frame = +1
Query: 886 PPPXXXXXXPXPXPPP-PXPPPXP 954
PPP P P P P P PPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +3
Query: 525 PXPPPXPXXXPXXXPPXPXPXXXXXXXXLSXAGXLXPPPXXXXPXXXSGPPPPP 686
P PPP P P P P + PPP PPPPP
Sbjct: 732 PPPPPPAVIVPT---PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.9 bits (59), Expect = 2.2
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = +3
Query: 531 PPPXPXXXPXXXPPXPXPXXXXXXXXLSXAGXLXPPPXXXXPXXXSGPPPPPXXXXPPXP 710
PPP P P P P P G PPP PPP PP P
Sbjct: 732 PPPPP---PAVIVPTPAPAPIPVPPPAPIMGGPPPPP----------PPPGVAGAGPPPP 778
Query: 711 PXXXPPXXA 737
P P A
Sbjct: 779 PPPPPAVSA 787
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 866 PPXXPXXPPPXXPXXXXXXXPPPPPPP 946
P P P P PPPPPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 834 PXXPPSRPXPXPXNXXXXPPRXXPXXPXSXPPPPXPPP 947
P PP+ P P P P P PPP PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVP---PPAPIMGGPPPPPPP 767
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.3 bits (75), Expect = 0.026
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2
Query: 866 PPXXPXXPPPXXPXXXXXXXPPPPPPP 946
PP P PPP P PPPPPPP
Sbjct: 5 PPGNPP-PPPPPPGFEPPSQPPPPPPP 30
Score = 32.3 bits (70), Expect = 0.10
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 518 LIPXXPPPPPXXXXXXPPXXXPXPPXXG 601
L P PPPPP PP P PP G
Sbjct: 4 LPPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 29.1 bits (62), Expect = 0.97
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 654 PXXXSGPPPPPXXXXPPXPPXXXPP 728
P PPPPP PP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 29.1 bits (62), Expect = 0.97
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 654 PXXXSGPPPPPXXXXPPXPPXXXPP 728
P PPPPP P PP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 878 PXXPPPXXPXXXXXXXPPPPPPPPXP 955
P PP P P PPPPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 843 PPSRPXPXPXNXXXXPPRXXPXXPXSXPPPPXPP 944
PP P P P PP S PPPP PP
Sbjct: 5 PPGNPPPPPPPPGFEPP--------SQPPPPPPP 30
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.9 bits (74), Expect = 0.034
Identities = 34/140 (24%), Positives = 36/140 (25%), Gaps = 13/140 (9%)
Frame = +3
Query: 567 PPXPXPXXXXXXXXLSXAGXLXPPPXXXXPXXXSGPPPPP-----XXXXPPXPPXXXPPX 731
PP P L G PPP +G PPP PP PP P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 732 XAXXXXXXXXXXXXXXXKHXXXXXXXXXXXXXPRPXXPPSRP------XPXPXNXXXXP- 890
A P PPS P P P + P
Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Query: 891 -PRXXPXXPXSXPPPPXPPP 947
P P P P P PPP
Sbjct: 459 LPAGMPAAPPLPPAAPAPPP 478
Score = 32.3 bits (70), Expect = 0.10
Identities = 20/70 (28%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Frame = +3
Query: 531 PPPXPXXXPXXXPPXPXPXXXXXXXXLSXAGXLXPPPXXXXPXXXSG-PPPPPXXXXPPX 707
P P P P PP P + A PP P +G P PP P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 708 PPXXXPPXXA 737
PP P A
Sbjct: 476 PPPAPAPAPA 485
Score = 29.9 bits (64), Expect = 0.55
Identities = 33/139 (23%), Positives = 34/139 (24%)
Frame = +3
Query: 525 PXPPPXPXXXPXXXPPXPXPXXXXXXXXLSXAGXLXPPPXXXXPXXXSGPPPPPXXXXPP 704
P PPP P PP S + PPP S P PP PP
Sbjct: 311 PPPPPPPSRRNRGKPPI--------GNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPP 362
Query: 705 XPPXXXPPXXAXXXXXXXXXXXXXXXKHXXXXXXXXXXXXXPRPXXPPSRPXPXPXNXXX 884
PP P P P SR P
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALP-PLGNASRTSTPP---VP 418
Query: 885 XPPRXXPXXPXSXPPPPXP 941
PP P P S PP P
Sbjct: 419 TPPSLPPSAPPSLPPSAPP 437
Score = 29.1 bits (62), Expect = 0.97
Identities = 32/141 (22%), Positives = 37/141 (26%), Gaps = 3/141 (2%)
Frame = +3
Query: 534 PPXPXXXPXXXPPXPXPXXXXXXXXLSXAGXLXPPPXXXXPXXXSGPPPPPXXXXPPXPP 713
PP P PP P LS + + PP + PP P P PP
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP--------APPPAIPGRSAPALPP 405
Query: 714 XXXPPXXAXXXXXXXXXXXXXXXKHXXXXXXXXXXXXXPR-PXXPPSRPX--PXPXNXXX 884
+ P P PPS P P P
Sbjct: 406 LGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPA 465
Query: 885 XPPRXXPXXPXSXPPPPXPPP 947
PP P + PP P P P
Sbjct: 466 APP--LPPAAPAPPPAPAPAP 484
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/70 (25%), Positives = 20/70 (28%), Gaps = 3/70 (4%)
Frame = +3
Query: 525 PXPPPXPXXXPXXXPPXPXPXXXXXXXX---LSXAGXLXPPPXXXXPXXXSGPPPPPXXX 695
P PP P P PP P L + + PP P PP P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 696 XPPXPPXXXP 725
P P P
Sbjct: 478 PAPAPAPAAP 487
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 843 PPSRPXPXPXNXXXXPPRXXPXXPXSXPPPPXPP 944
PP P P N PP S PPPP PP
Sbjct: 311 PPPPPPPSRRNRGK-PPIGNGSSNSSLPPPPPPP 343
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 866 PPXXPXXPPPXXPXXXXXXXPPPPPPP 946
PP P PP PPP PPP
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPP 259
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +2
Query: 866 PPXXPXXPPPXXPXXXXXXXPPPPPPPPXP 955
PP P P P P PPP P P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPP 259
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 866 PPXXPXXPPPXXPXXXXXXXPPPPPPPP 949
PP P PP P P PP PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 26.2 bits (55), Expect = 6.8
Identities = 18/69 (26%), Positives = 18/69 (26%), Gaps = 4/69 (5%)
Frame = +3
Query: 531 PPPXPXXXPXXXPPXPXPXXXXXXXX----LSXAGXLXPPPXXXXPXXXSGPPPPPXXXX 698
PPP PP P P L A PP P PP
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSA 435
Query: 699 PPXPPXXXP 725
PP P P
Sbjct: 436 PPSLPMGAP 444
Score = 25.8 bits (54), Expect = 9.0
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +2
Query: 866 PPXXPXXPPPXXPXXXXXXXPPPPPPPPXP 955
PP P PP P P PP P P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAP 457
Score = 23.8 bits (49), Expect(2) = 3.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 929 PPPPPPP 949
PPPPPPP
Sbjct: 311 PPPPPPP 317
Score = 21.8 bits (44), Expect(2) = 3.1
Identities = 9/27 (33%), Positives = 9/27 (33%)
Frame = +2
Query: 866 PPXXPXXPPPXXPXXXXXXXPPPPPPP 946
P PPP P PP PP
Sbjct: 246 PSLSAPAPPPIPPPSNGTVSSPPNSPP 272
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.1 bits (72), Expect = 0.059
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = -1
Query: 946 GGGXGGGGXXXGXXGXXRGGXXXXXXGXGXGREGGXXGRG 827
GG GG G G G RGG G GR G GRG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRG 58
Score = 32.3 bits (70), Expect = 0.10
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -1
Query: 946 GGGXGGGGXXXGXXGXXRGGXXXXXXGXGXGREGGXXGRG 827
GG GG G G G GG G G GG GRG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRG 51
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -1
Query: 946 GGGXGGGGXXXGXXGXXRGGXXXXXXGXGXGREGG 842
GGG GG G G RGG G G G +GG
Sbjct: 37 GGGRGGARGGRGGRGGARGGRGGSSGGRG-GAKGG 70
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -1
Query: 943 GGXGGGGXXXGXXGXXRGGXXXXXXG-XGXGREGGXXGRG 827
GG GG G RGG G G GR G GRG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRG 48
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 943 GGXGGGGXXXGXXGXXRGGXXXXXXGXGXGREGGXXG 833
GG GG G G RGG G G GG G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 954 GXGGGGGGGGXXXXXXXGXXGGGXXGXXGG 865
G GG GG G G GGG G GG
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGGRGGARGG 46
Score = 26.2 bits (55), Expect = 6.8
Identities = 22/61 (36%), Positives = 24/61 (39%)
Frame = -3
Query: 743 RGGPXXGRXXGGXXGXAXXRGWGGARXXRXXGXXXXGXXXXGX*KGXPRXXGXGGGXGGX 564
RGG GR GG G G+GG R G G +G R G GG GG
Sbjct: 11 RGGSRGGR--GGFNGGRG--GFGGGRGGARGGGRGGARGGRGG-RGGAR-GGRGGSSGGR 64
Query: 563 G 561
G
Sbjct: 65 G 65
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.1 bits (67), Expect = 0.24
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Frame = -1
Query: 724 GXXXGGXGGXXXXGGGGGPXXHXGXX-XXGGGXSXPAXERXXXXXXGXGXGXG-GXXXGX 551
G G GG GG GG H G GGG G G G G G
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
Query: 550 XXGXGGGXG 524
G GGG G
Sbjct: 258 PGGFGGGPG 266
Score = 30.3 bits (65), Expect = 0.42
Identities = 24/67 (35%), Positives = 24/67 (35%)
Frame = -1
Query: 724 GXXXGGXGGXXXXGGGGGPXXHXGXXXXGGGXSXPAXERXXXXXXGXGXGXGGXXXGXXX 545
G GG GG GG GGP G GG G G G GG G
Sbjct: 184 GHNGGGFGGFG--GGSGGPPPGPGGFGGFGGFGGEGHHH--GGHGGFGGGPGG-FEGGPG 238
Query: 544 GXGGGXG 524
G GGG G
Sbjct: 239 GFGGGPG 245
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 954 GXGGGGGGGGXXXXXXXGXXGGGXXGXXGG 865
G GG GGG G GGG G GG
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 954 GXGGGGGGGGXXXXXXXGXXGGGXXGXXGG 865
G GG GGG G GGG G GG
Sbjct: 235 GGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.32
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +3
Query: 828 PRPXXPP--SRPXPXPXNXXXXPPRXXPXXPXSXPPPPXPP 944
P+ PP S P P P PP P P P P PP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 30.3 bits (65), Expect = 0.42
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 866 PPXXPXXPPPXXPXXXXXXXPPPPPPPPXP 955
PP P PP PP PPPP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 633 PPPXXXXPXXXSGPPPPPXXXXPPXPP 713
PPP P S PP P P PP
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 654 PXXXSGPPPPPXXXXPPXPPXXXPP 728
P S PPPP P PP PP
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 27.1 bits (57), Expect(2) = 0.36
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = +3
Query: 633 PP--PXXXXPXXXSGPPPPPXXXXPPXPPXXXP 725
PP P P S P PPP P PP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 25.8 bits (54), Expect = 9.0
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = +2
Query: 566 PPXXXPXPPXXGXPPFXGRXTXPPXXXXXTXVXXGPP-PT-PXXXXPPXXPLXXAP 727
P P P PP T PP PP P P PP P AP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 21.8 bits (44), Expect(2) = 0.36
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 843 PPSRPXPXPXNXXXXPPRXXPXXPXSXPPPPXP 941
PPS P P P PP P S P P P
Sbjct: 1717 PPSAP-PMPAGPPSAPP--PPLPASSAPSVPNP 1746
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.7 bits (66), Expect = 0.32
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 843 PPSRPXPXPXNXXXXPPRXXPXXPXSXPPPPXPPP 947
PPS P P PP P P PP P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAP 158
Score = 29.5 bits (63), Expect = 0.73
Identities = 17/66 (25%), Positives = 17/66 (25%)
Frame = +3
Query: 531 PPPXPXXXPXXXPPXPXPXXXXXXXXLSXAGXLXPPPXXXXPXXXSGPPPPPXXXXPPXP 710
PP P PP P L PP P P PP P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Query: 711 PXXXPP 728
P PP
Sbjct: 199 PKVPPP 204
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 828 PRPXXPPSRPXPXPXNXXXXPPRXXPXXPXSXPPPPXP 941
PRP PP P P P P P S PPP P
Sbjct: 145 PRPSIPPPSPASAP-----PIPSKAPPIPSSLPPPAQP 177
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +3
Query: 834 PXXPPSRPXPXPXNXXXXPPRXXPXXPXSXPP-PPXPPP 947
P P S P P P P P + PP PP PP
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 27.1 bits (57), Expect = 3.9
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +2
Query: 524 PXXPPPPPXXXXXXPPXXXPXPPXXGXPPFXGRXTXPPXXXXXTXVXXGPPPTPXXXXPP 703
P PPP P P P P P P + PP P PP
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP--PSAPSLPSAVPPMPPKVPPP 204
Query: 704 XXPLXXAP 727
PL AP
Sbjct: 205 --PLSQAP 210
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 869 PXXPXXPPPXXPXXXXXXXPPPPPPPPXP 955
P P PP P P PP PP P
Sbjct: 177 PAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 25.8 bits (54), Expect = 9.0
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 926 PPPPPPPPXP 955
P PPPPPP P
Sbjct: 3 PAPPPPPPAP 12
Score = 25.8 bits (54), Expect = 9.0
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 926 PPPPPPPPXP 955
PPPPPP P P
Sbjct: 5 PPPPPPAPAP 14
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/31 (38%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Frame = +2
Query: 866 PPXXPXXPPPXXPXXXXXXXPPPPP-PPPXP 955
PP P P P PP P PPP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSP 154
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.9 bits (64), Expect = 0.55
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 878 PXXPPPXXPXXXXXXXPPPPPPPP 949
P PP P PPPPPPP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPP 244
Score = 27.5 bits (58), Expect = 2.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 913 PXPXPPPPXPPPXP 954
P P PPPP PP P
Sbjct: 234 PLPAPPPPPPPTLP 247
Score = 26.6 bits (56), Expect = 5.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 926 PPPPPPPP 949
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect = 5.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 926 PPPPPPPP 949
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 26.2 bits (55), Expect = 6.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 929 PPPPPPPXP 955
PPPPPPP P
Sbjct: 189 PPPPPPPPP 197
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.73
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 828 PRPXXPPSRPXPXPXNXXXXPPRXXPXXPXSXPP 929
PRP PPS P P P + P P P PP
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEP--PKDHPP 992
Score = 29.5 bits (63), Expect = 0.73
Identities = 33/138 (23%), Positives = 34/138 (24%), Gaps = 2/138 (1%)
Frame = +3
Query: 534 PPXPXXXPXXXPPXPXPXXXXXXXXLSXAGXLXPPPXXXXPXXX--SGPPPPPXXXXPPX 707
PP P P PP P P + P P P SG PP P
Sbjct: 1112 PPVPA--PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAA- 1168
Query: 708 PPXXXPPXXAXXXXXXXXXXXXXXXKHXXXXXXXXXXXXXPRPXXPPSRPXPXPXNXXXX 887
PP P P P PPS P P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP--PPSTAPPVPTPSAGL 1226
Query: 888 PPRXXPXXPXSXPPPPXP 941
PP P PP P P
Sbjct: 1227 PP--VPVPTAKAPPVPAP 1242
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +3
Query: 534 PPXPXXXPXXXPPXPXPXXXXXXXXLSXAGXLXPPPXXXXPXXXSGPPPPPXXXXPPXPP 713
PP P P PP P P S PPP P P P P P
Sbjct: 1032 PPIPV--PSTAPPVPIPTSTPPVPKSSSGAPSAPPP-VPAPSSEIPSIPAPSGAPPVPAP 1088
Query: 714 XXXPP 728
PP
Sbjct: 1089 SGIPP 1093
Score = 26.6 bits (56), Expect = 5.1
Identities = 36/146 (24%), Positives = 38/146 (26%), Gaps = 10/146 (6%)
Frame = +3
Query: 534 PPXPXXXPXXXPPXPXPXXXXXXXXL-SXAGXLXPPPXXXXPXXX---SGPPPPPXXXXP 701
PP P P PP P P S A P P P + PP P P
Sbjct: 1083 PPVPA--PSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Query: 702 PXP------PXXXPPXXAXXXXXXXXXXXXXXXKHXXXXXXXXXXXXXPRPXXPPSRPXP 863
P P P P A P P PPS P
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVP-PVPPPSEAPP 1199
Query: 864 XPXNXXXXPPRXXPXXPXSXPPPPXP 941
P PP P + PP P P
Sbjct: 1200 VPKPSVGVPP---VPPPSTAPPVPTP 1222
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = +3
Query: 87 PLVSQRPPLNLHKLTMNFAKILSFVFALVLALRMTSAAPEPRWKIFKKIEKMGRNIRDGI 266
PL+ PP N+ + + + FAL + R+ ++ P+P+ ++ R I D +
Sbjct: 146 PLLLSNPPRNMIGQSQSGTGKTA-AFALTMLSRVDASVPKPQAICLAPSRELARQIMDVV 204
Query: 267 VKAGPAIEV 293
+ G EV
Sbjct: 205 TEMGKYTEV 213
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 5.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 926 PPPPPPPP 949
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 5.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 926 PPPPPPPP 949
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 26.2 bits (55), Expect = 6.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 929 PPPPPPPXP 955
PPPPPPP P
Sbjct: 306 PPPPPPPPP 314
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 5.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 926 PPPPPPPP 949
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 25.8 bits (54), Expect = 9.0
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 912 PXSXPPPPXPPP 947
P + PPPP PPP
Sbjct: 1091 PSAVPPPPPPPP 1102
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 5.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 926 PPPPPPPP 949
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 5.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 926 PPPPPPPP 949
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 26.6 bits (56), Expect = 5.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 926 PPPPPPPP 949
PPPPPPPP
Sbjct: 946 PPPPPPPP 953
Score = 26.2 bits (55), Expect = 6.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 929 PPPPPPPXP 955
PPPPPPP P
Sbjct: 945 PPPPPPPPP 953
Score = 25.8 bits (54), Expect = 9.0
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 926 PPPPPPPPXP 955
P PPPPPP P
Sbjct: 905 PTPPPPPPLP 914
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.2 bits (55), Expect = 6.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 948 GGGGGGGGXXXXXXXGXXGGGXXGXXGG 865
GG GG G G GGG G GG
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGG 172
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,778,279
Number of Sequences: 5004
Number of extensions: 54585
Number of successful extensions: 727
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 487313384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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