Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_M18
         (906 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,398...    31   0.95 
07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026     30   2.2  
07_03_1125 - 24162298-24162586,24162730-24162783,24162940-241630...    28   8.9  

>12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,
            3983250-3983301,3983497-3983654,3983756-3985617,
            3986029-3986093,3986176-3986340,3986836-3986893,
            3987479-3987590,3987661-3987712,3988080-3988140,
            3988220-3988377,3988705-3988787,3988897-3988945,
            3989122-3989185,3990225-3990317,3990410-3990543,
            3991364-3991585,3991815-3991937,3992103-3992267,
            3993064-3993450
          Length = 1479

 Score = 31.5 bits (68), Expect = 0.95
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -3

Query: 304  SSASQACFSEELLFVHHRGSSCHHLTTLHPC 212
            SS+S +  S E L VH  G SC  LT L+ C
Sbjct: 1095 SSSSSSASSTERLKVHQSGKSCKELTGLYMC 1125


>07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026
          Length = 961

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -3

Query: 304 SSASQACFSEELLFVHHRGSSCHHLTTLHPC 212
           SS+S +  S E L  H  G SC  LT L+ C
Sbjct: 135 SSSSSSASSSERLKAHQSGKSCKELTGLYMC 165


>07_03_1125 -
           24162298-24162586,24162730-24162783,24162940-24163035,
           24163149-24163190,24163688-24163756,24164262-24164284
          Length = 190

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 16  ASPTRASLKLXLFIQLIXCVFVILFNSHTQATDEVV 123
           ++PT+ S+ L LFI ++  V   L +SH    D +V
Sbjct: 101 SAPTQVSVSLLLFILILLIVLTCLASSHQVDKDSLV 136


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,051,459
Number of Sequences: 37544
Number of extensions: 429179
Number of successful extensions: 1140
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)