Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_M18
         (906 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66512-7|CAA91321.1|  730|Caenorhabditis elegans Hypothetical pr...   128   4e-30
AL023842-5|CAA19519.1|  393|Caenorhabditis elegans Hypothetical ...    30   2.0  
AL033510-9|CAL49451.1|  291|Caenorhabditis elegans Hypothetical ...    29   4.6  
AL033510-8|CAA22061.1|  291|Caenorhabditis elegans Hypothetical ...    29   4.6  
AF038620-1|AAB93487.1|  256|Caenorhabditis elegans Hypothetical ...    28   8.0  

>Z66512-7|CAA91321.1|  730|Caenorhabditis elegans Hypothetical
           protein F52H3.1 protein.
          Length = 730

 Score =  128 bits (310), Expect = 4e-30
 Identities = 57/107 (53%), Positives = 77/107 (71%)
 Frame = +2

Query: 386 KKFKSFPDTRVLFSAEQFCWPDAKLATQYPNIEVVSPYLNSGGFIGYLPEIYEIINSNPI 565
           K F+ + + R+LF AE FCWPD  LA +YP +E    +LNSG F+GY PE+++I+    +
Sbjct: 114 KFFEHYSEKRLLFGAEPFCWPDQSLAPEYPIVEFGKRFLNSGLFMGYGPEMHKILKLKSV 173

Query: 566 KDKDDDQLYYTKIYLDKDLRESLXITLDHKSXIFQNLNGALSDVQLR 706
           +DKDDDQLYYT IYLD+ LR+ L + LD  S IFQNLNG + DV+L+
Sbjct: 174 EDKDDDQLYYTMIYLDEKLRKELNMDLDSMSKIFQNLNGVIEDVELQ 220



 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 44/90 (48%), Positives = 64/90 (71%), Gaps = 3/90 (3%)
 Frame = +1

Query: 100 TQATD--EVVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGDMNF-PGGGQKV 270
           T  TD  E+VV+TVAT++  GL+R L SAK ++I++EVLG GE+W+GGD     GGGQK+
Sbjct: 17  TTITDLPELVVVTVATENTDGLKRLLESAKAFDINIEVLGLGEKWNGGDTRIEQGGGQKI 76

Query: 271 ILLKNRLEKLMKADNKEKIILFTDSYDVMF 360
            +L + +EK    D  + +I+F D+YDV+F
Sbjct: 77  RILSDWIEKY--KDASDTMIMFVDAYDVVF 104



 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 20/35 (57%), Positives = 23/35 (65%)
 Frame = +1

Query: 757 KALIVHGNGPXKNTLNHYGNYLAXSWSXNXGCVLC 861
           K LIVHGNGP K+ LN+ GNYL   W+   GC  C
Sbjct: 237 KPLIVHGNGPSKSHLNYLGNYLGNRWNSQLGCRTC 271


>AL023842-5|CAA19519.1|  393|Caenorhabditis elegans Hypothetical
           protein Y44A6D.5 protein.
          Length = 393

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +2

Query: 602 IYLDK--DLRESLXI-TLDHKSXIFQNLNGALSDVQLRANTTEEWPYI 736
           +Y DK  D+ E+L I TL  K  +   LN  LSD+       +EW +I
Sbjct: 343 VYCDKELDVMENLQIPTLSSKMQLHTRLNKTLSDIHFGRIEKKEWQHI 390


>AL033510-9|CAL49451.1|  291|Caenorhabditis elegans Hypothetical
           protein Y40H7A.4b protein.
          Length = 291

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +1

Query: 31  ASLKLXLFIQLIXCVFVILFNSHTQATDEVVVLTVATD--DNHGLERFLRSAKVYNIDVE 204
           ++LK  +++ +I     I    H++   EV +L +  +  ++ GLE+FLR   V  I +E
Sbjct: 168 STLKSHVYVGMIPDNLTIAHIMHSEYKTEVEILKIDIEGGEHTGLEQFLRDFFVCQILIE 227

Query: 205 VLG 213
           + G
Sbjct: 228 IHG 230


>AL033510-8|CAA22061.1|  291|Caenorhabditis elegans Hypothetical
           protein Y40H7A.4a protein.
          Length = 291

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +1

Query: 31  ASLKLXLFIQLIXCVFVILFNSHTQATDEVVVLTVATD--DNHGLERFLRSAKVYNIDVE 204
           ++LK  +++ +I     I    H++   EV +L +  +  ++ GLE+FLR   V  I +E
Sbjct: 168 STLKSHVYVGMIPDNLTIAHIMHSEYKTEVEILKIDIEGGEHTGLEQFLRDFFVCQILIE 227

Query: 205 VLG 213
           + G
Sbjct: 228 IHG 230


>AF038620-1|AAB93487.1|  256|Caenorhabditis elegans Hypothetical
           protein H10D12.2 protein.
          Length = 256

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 235 GDMNFPGGGQKVILLKNRLEKL 300
           G+ N PGGG +   LKN+LE L
Sbjct: 133 GETNTPGGGSEENTLKNKLEDL 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,441,875
Number of Sequences: 27780
Number of extensions: 388174
Number of successful extensions: 1154
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)