Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_M17
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein pro... 91 4e-18
BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19 p... 91 4e-18
BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19 p... 91 4e-18
BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19 p... 91 4e-18
AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19 p... 91 4e-18
BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19 p... 90 9e-18
>M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein
protein.
Length = 145
Score = 91.5 bits (217), Expect = 4e-18
Identities = 61/137 (44%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Frame = +2
Query: 74 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLP 253
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAP
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPY--DENWFYTRAA 58
Query: 254 SFVIFTFAHLLESRLSPRSLVGANVME--LHLHISAGHQAVLHARALQSLEALKLVEKVQ 427
S + S + G + H S G ++V R LQ+LE LK+VEK Q
Sbjct: 59 STARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVAR-RVLQALEGLKMVEKDQ 117
Query: 428 DGGRILTTQGRRDLDRI 478
DGGR LT QG+RDLDRI
Sbjct: 118 DGGRKLTPQGQRDLDRI 134
Score = 74.1 bits (174), Expect = 6e-13
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 229 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKGFAIVGGIE 408
WFY R A+ RH+Y+R GV ++TKI+GGR RNGV PSHF R S S+AR+ + G++
Sbjct: 52 WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 111
>BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 91.5 bits (217), Expect = 4e-18
Identities = 61/137 (44%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Frame = +2
Query: 74 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLP 253
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAP
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPY--DENWFYTRAA 58
Query: 254 SFVIFTFAHLLESRLSPRSLVGANVME--LHLHISAGHQAVLHARALQSLEALKLVEKVQ 427
S + S + G + H S G ++V R LQ+LE LK+VEK Q
Sbjct: 59 STARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVAR-RVLQALEGLKMVEKDQ 117
Query: 428 DGGRILTTQGRRDLDRI 478
DGGR LT QG+RDLDRI
Sbjct: 118 DGGRKLTPQGQRDLDRI 134
Score = 74.1 bits (174), Expect = 6e-13
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 229 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKGFAIVGGIE 408
WFY R A+ RH+Y+R GV ++TKI+GGR RNGV PSHF R S S+AR+ + G++
Sbjct: 52 WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 111
>BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 91.5 bits (217), Expect = 4e-18
Identities = 61/137 (44%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Frame = +2
Query: 74 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLP 253
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAP
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPY--DENWFYTRAA 58
Query: 254 SFVIFTFAHLLESRLSPRSLVGANVME--LHLHISAGHQAVLHARALQSLEALKLVEKVQ 427
S + S + G + H S G ++V R LQ+LE LK+VEK Q
Sbjct: 59 STARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVAR-RVLQALEGLKMVEKDQ 117
Query: 428 DGGRILTTQGRRDLDRI 478
DGGR LT QG+RDLDRI
Sbjct: 118 DGGRKLTPQGQRDLDRI 134
Score = 74.1 bits (174), Expect = 6e-13
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 229 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKGFAIVGGIE 408
WFY R A+ RH+Y+R GV ++TKI+GGR RNGV PSHF R S S+AR+ + G++
Sbjct: 52 WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 111
>BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 91.5 bits (217), Expect = 4e-18
Identities = 61/137 (44%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Frame = +2
Query: 74 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLP 253
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAP
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPY--DENWFYTRAA 58
Query: 254 SFVIFTFAHLLESRLSPRSLVGANVME--LHLHISAGHQAVLHARALQSLEALKLVEKVQ 427
S + S + G + H S G ++V R LQ+LE LK+VEK Q
Sbjct: 59 STARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVAR-RVLQALEGLKMVEKDQ 117
Query: 428 DGGRILTTQGRRDLDRI 478
DGGR LT QG+RDLDRI
Sbjct: 118 DGGRKLTPQGQRDLDRI 134
Score = 74.1 bits (174), Expect = 6e-13
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 229 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKGFAIVGGIE 408
WFY R A+ RH+Y+R GV ++TKI+GGR RNGV PSHF R S S+AR+ + G++
Sbjct: 52 WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 111
>AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 91.5 bits (217), Expect = 4e-18
Identities = 61/137 (44%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Frame = +2
Query: 74 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLP 253
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAP
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPY--DENWFYTRAA 58
Query: 254 SFVIFTFAHLLESRLSPRSLVGANVME--LHLHISAGHQAVLHARALQSLEALKLVEKVQ 427
S + S + G + H S G ++V R LQ+LE LK+VEK Q
Sbjct: 59 STARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVAR-RVLQALEGLKMVEKDQ 117
Query: 428 DGGRILTTQGRRDLDRI 478
DGGR LT QG+RDLDRI
Sbjct: 118 DGGRKLTPQGQRDLDRI 134
Score = 74.1 bits (174), Expect = 6e-13
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 229 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKGFAIVGGIE 408
WFY R A+ RH+Y+R GV ++TKI+GGR RNGV PSHF R S S+AR+ + G++
Sbjct: 52 WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 111
>BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19
protein.
Length = 157
Score = 90.2 bits (214), Expect = 9e-18
Identities = 60/134 (44%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
Frame = +2
Query: 83 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLPSFV 262
VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAP S
Sbjct: 16 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPY--DENWFYTRAASTA 73
Query: 263 IFTFAHLLESRLSPRSLVGANVME--LHLHISAGHQAVLHARALQSLEALKLVEKVQDGG 436
+ S + G + H S G ++V R LQ+LE LK+VEK QDGG
Sbjct: 74 RHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVAR-RVLQALEGLKMVEKDQDGG 132
Query: 437 RILTTQGRRDLDRI 478
R LT QG+RDLDRI
Sbjct: 133 RKLTPQGQRDLDRI 146
Score = 74.1 bits (174), Expect = 6e-13
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 229 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKGFAIVGGIE 408
WFY R A+ RH+Y+R GV ++TKI+GGR RNGV PSHF R S S+AR+ + G++
Sbjct: 64 WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,348,152
Number of Sequences: 237096
Number of extensions: 1475751
Number of successful extensions: 2808
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2808
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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