Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_M10
         (869 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753...    31   0.91 
03_03_0132 + 14711645-14711839,14712641-14712970,14713689-147137...    31   0.91 
08_02_0783 - 21166491-21166892,21167139-21167251,21168127-211682...    31   1.2  
09_04_0727 + 19765175-19765384,19765523-19765595,19766476-197665...    30   2.1  
01_05_0560 - 23288078-23288370,23288448-23288733                       30   2.8  
04_04_0766 - 27923120-27923554,27923843-27924580,27924815-279248...    29   4.8  
01_01_0206 - 1770622-1771347                                           29   4.8  

>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
            18577344-18577458,18578179-18578333,18578673-18580621,
            18580691-18581372,18581550-18581621,18582558-18583199,
            18583301-18583402,18585011-18585100
          Length = 2192

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +3

Query: 243  PRAPSTADHPILPSKIDDVQLDPNRRYVRSVTNPENNEASIEHSHHT 383
            P  P T  H I  S +DD+     R  VR   +P+N ++ +  S +T
Sbjct: 2064 PEPPETGTHRIEFSAVDDMDTGSCRSPVRDTPDPDNQKSELSGSGNT 2110


>03_03_0132 +
           14711645-14711839,14712641-14712970,14713689-14713751,
           14713833-14713906,14714004-14714099,14714705-14714759,
           14714867-14714971,14715054-14715135,14715450-14715562,
           14715717-14716118
          Length = 504

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 718 HCIFMQXYXKYHLNLSNYDSMNIGVHSE 635
           HCI+   Y K HL+ S +  +N+  HS+
Sbjct: 348 HCIYDGGYCKLHLSYSRHTDLNVKAHSD 375


>08_02_0783 -
           21166491-21166892,21167139-21167251,21168127-21168208,
           21168298-21168416,21168471-21168528,21168954-21169016,
           21169641-21169850,21171549-21171731
          Length = 409

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 718 HCIFMQXYXKYHLNLSNYDSMNIGVHSE 635
           HCI+   Y K HL+ S +  +N+  H E
Sbjct: 253 HCIYDGGYCKLHLSYSRHTDLNVKAHDE 280


>09_04_0727 + 19765175-19765384,19765523-19765595,19766476-19766570,
            19766666-19768450,19768533-19768721,19768816-19768958,
            19769075-19769320,19769975-19770059,19770117-19770191,
            19770304-19770369,19770466-19770712,19770824-19771242
          Length = 1210

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +3

Query: 468  VPTLPPFNPKPIYIDMGNRYRRHASDD-QEELRQYNEHFL 584
            +P LP  NP+P+  D G      ASDD  E+L      F+
Sbjct: 1119 LPELPELNPEPMVTDNGENAAMPASDDIPEQLEVVKRRFM 1158


>01_05_0560 - 23288078-23288370,23288448-23288733
          Length = 192

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = +3

Query: 240 VPRAPSTADHPILPSKIDDVQLDPNRRYVRS 332
           +PR P  A H +L S  DDV  DP+ RYV S
Sbjct: 120 LPR-PLRAGHYVLSSPPDDVDHDPDHRYVFS 149


>04_04_0766 -
           27923120-27923554,27923843-27924580,27924815-27924874,
           27925281-27925328
          Length = 426

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +2

Query: 152 LQATANTAPDNTYSATSWPGTAMAVSR*QCSSCAKYCRPSDSSFENRRRAARS 310
           L  T++ APD   +A +     + V+    SS    CRPS SSF   +R A S
Sbjct: 154 LVPTSSPAPDQAPAAEATDVDDVVVAALDSSSIDGSCRPSPSSFVAWKRTADS 206


>01_01_0206 - 1770622-1771347
          Length = 241

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +3

Query: 444 LYPRGKL-PVPTLPPFNPKP 500
           L+  GKL PVP LPP +PKP
Sbjct: 68  LFAGGKLLPVPPLPPVHPKP 87


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,536,965
Number of Sequences: 37544
Number of extensions: 461133
Number of successful extensions: 1373
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)