Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_M02
(858 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 114 1e-25
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 113 1e-25
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 52 8e-07
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 49 4e-06
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 49 5e-06
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 48 7e-06
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 46 4e-05
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 44 1e-04
03_01_0249 - 1935355-1935827,1936129-1936330 38 0.010
01_01_1176 - 9372879-9373097,9373814-9374278,9374372-9375447,937... 36 0.055
10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681... 33 0.29
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 32 0.51
03_05_1139 - 30689514-30689609,30689795-30689956,30691245-306912... 31 1.6
11_06_0584 - 25220371-25222917 30 2.1
02_05_1202 + 34932291-34933027,34933297-34933774 30 2.1
10_08_0710 + 20070655-20070990,20071074-20071469 29 3.6
10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111 29 6.3
05_03_0629 + 16376575-16376689,16376792-16376839,16376927-163770... 29 6.3
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 29 6.3
03_06_0489 - 34284301-34284336,34285104-34285227,34285307-342853... 29 6.3
02_04_0633 - 24616563-24617279 29 6.3
01_01_0735 + 5730783-5733320 29 6.3
06_01_0042 + 410061-410544,411401-411837 28 8.3
05_03_0260 - 11200887-11200907,11200979-11201961,11212201-11212390 28 8.3
04_04_1247 - 32043776-32043880,32044296-32044505,32044595-320451... 28 8.3
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 114 bits (274), Expect = 1e-25
Identities = 67/171 (39%), Positives = 96/171 (56%), Gaps = 4/171 (2%)
Frame = +1
Query: 73 PKTPTMAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKV 252
P P A VL+ N A+KALIAA+Y+G V++ NF G +NK+ +FLK P GK+
Sbjct: 19 PAAPVGMALVLHCGSGNKNAFKALIAAEYTGVKVELTKNFEMGVSNKTPEFLKMNPLGKI 78
Query: 253 PAFESADGKVLLTESNAIAYYVA----NESLRGGDLATQARVWQWASWSDSELLPASCAW 420
P E+ +G V ESNAIA YVA N SL G L + + QW +S +E+ W
Sbjct: 79 PVLETPEGAVF--ESNAIARYVARLKDNSSLCGSSLIDYSHIEQWMDFSATEVDANIGRW 136
Query: 421 VFPYLGIMQFNKXNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIV 573
++P LG + E A + L +L L+ HL + T+LV +TLAD+++
Sbjct: 137 LYPRLGFGPYVPVLEEFAITSLKRSLGALNTHLASNTYLVGHSVTLADIVM 187
>02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 113 bits (273), Expect = 1e-25
Identities = 68/171 (39%), Positives = 97/171 (56%), Gaps = 13/171 (7%)
Frame = +1
Query: 100 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 279
VL+T+ N A+KALIAA+YSG V++A NF G +NK+ ++LK P GKVP E+ DG
Sbjct: 565 VLHTFDGNKNAFKALIAAEYSGVKVELAKNFQMGVSNKTPEYLKMNPIGKVPILETPDGP 624
Query: 280 VLLTESNAIAYYVANES-------------LRGGDLATQARVWQWASWSDSELLPASCAW 420
V ESNAIA YV + S L G L A + QW +S +E+ + W
Sbjct: 625 VF--ESNAIARYVLSSSHFPEVTRSKSDNPLYGSSLIEYAHIEQWIDFSATEVDANTGKW 682
Query: 421 VFPYLGIMQFNKXNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIV 573
+FP LG + + E A + L +L L+ HL + T+LV +TLAD+++
Sbjct: 683 LFPRLGFAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLADIVM 733
Score = 107 bits (258), Expect = 8e-24
Identities = 66/171 (38%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Frame = +1
Query: 100 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 279
VL+ N A+KALIAA+YSG V++ NF G +NK+ +FLK P GK+P E+ DG
Sbjct: 4 VLHAGSGNKNAFKALIAAEYSGVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETPDGP 63
Query: 280 VLLTESNAIAYYV-------------ANESLRGGDLATQARVWQWASWSDSELLPASCAW 420
V ESNAIA YV A+ L G L A + QW +S +E+ W
Sbjct: 64 VF--ESNAIARYVLSHCHFPEVTRSKADNPLYGSSLIEYAHIEQWNDFSATEVDANIGKW 121
Query: 421 VFPYLGIMQFNKXNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIV 573
++P LGI + + E A + L +L L+ HL + T+LV +TLAD+++
Sbjct: 122 LYPRLGIAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLADIVM 172
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 51.6 bits (118), Expect = 8e-07
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 12/160 (7%)
Frame = +1
Query: 142 LIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 318
L+ + +G + VA + GE N+S L + P GK+PAFE DG+V L ES AI YV
Sbjct: 18 LVCLEEAGASYELVAVDMAAGE-NRSRHHLARSPFGKIPAFE--DGEVTLFESRAIQRYV 74
Query: 319 AN-----ESLRGGDLATQARVWQWASWSDSELLPA------SCAWVFPYLGIMQFNKXNV 465
+ LR G+L A V W PA C + P +G ++ V
Sbjct: 75 LRNYNKPDLLREGNLEESAMVDMWMEVEAHHYDPAIFHIIRECV-IKPMIGGGARDQAIV 133
Query: 466 ERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFXYT 585
+ L L+V + L +L + +++AD+ F YT
Sbjct: 134 DENVEKLRKVLEVYERRLSESEYLAGDFVSVADLNHFPYT 173
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 49.2 bits (112), Expect = 4e-06
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Frame = +1
Query: 136 KALIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 312
+ L+ + G D + V +F+ GE N S + +++ P GK+PA + DG ++L ES AIA
Sbjct: 17 RVLVCLEEVGADYELVTVDFLAGEQN-SPEHVERNPFGKIPALQ--DGDLVLFESRAIAK 73
Query: 313 YVAN-------ESLRGGDLATQARVWQWASWSDSELLPA------SCAWVFPYLGIMQFN 453
Y+ + LR D+ A V W + PA C +FP + + N
Sbjct: 74 YILRKYKSSKVDLLRESDIREAALVDVWTEVEAHQYYPALSPIVFECI-IFPIMRGVPTN 132
Query: 454 KXNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFXYT 585
+ V + L L+ + L +L + ++ AD+ F +T
Sbjct: 133 QQVVHESLEKLKKVLETYEARLSGSRYLAGDFLSFADLNHFPFT 176
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 48.8 bits (111), Expect = 5e-06
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Frame = +1
Query: 136 KALIAAQYSGTDVKVAP-NFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 312
+ L+ + G + +V +F E +KS + LK+ P G++PAF+ DG + L ES AI
Sbjct: 17 RVLLCLEEVGAEYEVVNVDFTVME-HKSPEHLKRNPFGQIPAFQ--DGDLYLFESRAIGK 73
Query: 313 YVAN-------ESLRGGDLATQARVWQWASWSDSELLPASCAWVF-----PYLGIMQFNK 456
Y+ + LR G+L A V W + A V+ P + + N+
Sbjct: 74 YILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQ 133
Query: 457 XNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFXYT 585
V+ + L L+V + L T+L + ++ AD+ F YT
Sbjct: 134 KVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYT 176
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 48.4 bits (110), Expect = 7e-06
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 9/172 (5%)
Frame = +1
Query: 88 MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFES 267
MA +Y + + L+ + G + +V P + +K + + P G+VPAFE
Sbjct: 1 MAPAKVYGPAMSTNVMRILVCLEEVGAEYEVVPVDMSTGEHKRPPHISRNPFGQVPAFE- 59
Query: 268 ADGKVLLTESNAIAYYV----ANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYL 435
DG + L ES AI+ Y+ ++ LR +L+ A V W S A +F
Sbjct: 60 -DGDLTLFESRAISKYILRKHGSDLLRESNLSESAMVDVWLEVESSHFDGAMSPIIFQCF 118
Query: 436 GIMQF-----NKXNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVF 576
+ F + V + L AL+V + L +L + I+LAD+ F
Sbjct: 119 IVPMFMGGATDIGVVNESLEKLKKALEVYEAQLSKSKYLAGDFISLADISHF 170
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 46.0 bits (104), Expect = 4e-05
Identities = 43/144 (29%), Positives = 60/144 (41%), Gaps = 10/144 (6%)
Frame = +1
Query: 163 GTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANE-SLRG 339
G D + P + +K FL P G++P + DG +L ES AI Y+A + G
Sbjct: 30 GLDFDLVPVDLRTAAHKQPHFLALNPFGQIPVLQ--DGDEVLYESRAINRYIATKYKAEG 87
Query: 340 GDL----ATQARVWQWASWSDSELLPASCAWVF-----PYLGIMQFNKXNVERAKSDLLA 492
DL A+ A++ W PA VF P LG + V+ + L
Sbjct: 88 ADLLPAEASPAKLEVWLEVESHHFYPAISGLVFQLLIKPLLGGAT-DTAAVDEHAAALAQ 146
Query: 493 ALKVLDGHLLTRTFLVTERITLAD 564
L V D HL +L R +LAD
Sbjct: 147 VLDVYDAHLAGSRYLAGNRFSLAD 170
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 44.4 bits (100), Expect = 1e-04
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Frame = +1
Query: 136 KALIAAQYSGTDVKVAPNFVFGET-NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 312
+ L+ + G D ++ + FG+ +K D L + P G+VPAF+ DG ++L ES AI
Sbjct: 17 RVLLCLEEVGADYEIV-DVDFGDREHKGPDHLARNPFGQVPAFQ--DGDLMLFESRAICR 73
Query: 313 YVANES--------LRGGDLATQARVWQWASWSDSELLPASCA-----WVFPYLGIMQFN 453
Y+ + LR GD + A V W P+ A V P LG + +
Sbjct: 74 YILRKHRATDEANLLREGDPSESAVVDAWLDVEALRYEPSVHAVFVQRRVVPALG-GEPD 132
Query: 454 KXNVERAKSDLLAALKVLDGHL-LTRTFLVTERITLADVIVFXYT 585
+ + + + L L V + L TR +L ++LAD+ F YT
Sbjct: 133 ERVIAESVARLRETLAVYEARLEATRGYLAGGEVSLADLSHFPYT 177
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 37.9 bits (84), Expect = 0.010
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Frame = +1
Query: 208 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV-------ANESLRG---GDLATQ 357
+KS FLK P G+VPAF+ D + ES AI Y+ N++L G +
Sbjct: 42 HKSPSFLKLQPFGQVPAFK--DSLTTVFESRAICRYICDQYADSGNKTLMGRKEDGAVGR 99
Query: 358 ARVWQWASWSDSELLPASCAWVF-----PYLGIMQFNKXNVERAKSDLLAALKVLDGHLL 522
A + +W P S A F P++G + VE+ ++ L+ L V + L
Sbjct: 100 AAIEKWIEAEGQSFNPPSLAMAFQLAFAPFMG-RATDMAVVEQNEAKLVKVLDVYEQWLG 158
Query: 523 TRTFLVTERITLADVI 570
+ + +LAD++
Sbjct: 159 ENQYFAGDEFSLADLV 174
>01_01_1176 -
9372879-9373097,9373814-9374278,9374372-9375447,
9375534-9375687,9375783-9375879,9376238-9376374
Length = 715
Score = 35.5 bits (78), Expect = 0.055
Identities = 15/33 (45%), Positives = 25/33 (75%)
Frame = +1
Query: 478 SDLLAALKVLDGHLLTRTFLVTERITLADVIVF 576
S+ AA LDG+L +RTFLV+ +++AD++V+
Sbjct: 93 SEFEAACSFLDGYLASRTFLVSYGLSIADIVVW 125
>10_06_0131 -
11066033-11066251,11066548-11067012,11067102-11068177,
11068269-11068422,11068511-11068601,11069016-11069152
Length = 713
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 478 SDLLAALKVLDGHLLTRTFLVTERITLADVIVF 576
S+ A +DG+L++RTFLV +T+AD+ V+
Sbjct: 91 SEFEVACSFVDGYLMSRTFLVGHVLTIADITVW 123
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 32.3 bits (70), Expect = 0.51
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 103 LYTYPENFRAYKALIAAQYSGTDVKV-APNFVFGETNKSEDFLKKFPAGKVPAFESADGK 279
LY+Y + +++ IA G + + A N + GE + E F+K P VPA DG
Sbjct: 16 LYSYWRSSCSHRVRIALNLKGLEYEYKAVNLLKGEHSDPE-FMKVNPMKFVPAL--VDGD 72
Query: 280 VLLTESNAIAYYVANE 327
++ +S AIA Y+ ++
Sbjct: 73 AVIGDSYAIALYLEDK 88
>03_05_1139 -
30689514-30689609,30689795-30689956,30691245-30691299,
30691695-30691959,30692749-30692959,30693542-30693721,
30693802-30693899,30694211-30694277,30694897-30694963,
30695335-30695447,30695988-30696032,30696116-30696223,
30696582-30696791,30697464-30697670,30697786-30697875,
30698168-30698389
Length = 731
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/71 (19%), Positives = 35/71 (49%)
Frame = -3
Query: 280 PFHRHFRMQALFRQETSSRSLRTCWSRQIRNSVLLSHQSRNIVRRSTLYKRGSFPDKCKV 101
PF + + R++T + R + + +S++++ ++RR Y + PD +
Sbjct: 665 PFGHDQTQERILREDTIINARRV----EFPSKPAVSNEAKELIRRCLTYNQAERPDVLTI 720
Query: 100 PRPPWLEFSER 68
+ P+L +++R
Sbjct: 721 AQEPYLSYAKR 731
>11_06_0584 - 25220371-25222917
Length = 848
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -2
Query: 548 LSVTRKVRVRRCPSSTFKAASRSDFARSTXCLLNCMIPR*GKTQAQEAGSSSLSD 384
+++ + R R P + R + +ST C C +PR K +AG S+++D
Sbjct: 386 INIRKTARRRELPQKQHQHKLR--WTQSTICCCYCRVPRIMKATTADAGGSNIND 438
>02_05_1202 + 34932291-34933027,34933297-34933774
Length = 404
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 466 ERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVF 576
+ A +L AAL L+ HL +L + +TLADV +F
Sbjct: 257 DAAAGELFAALDRLEDHLSGSRYLCGDTLTLADVCLF 293
>10_08_0710 + 20070655-20070990,20071074-20071469
Length = 243
Score = 29.5 bits (63), Expect = 3.6
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +1
Query: 208 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV------ANESLRGGDLATQARVW 369
NKSE L P K +GK + ES I YV A ESL D +A
Sbjct: 45 NKSELLLSSNPVHKKVPVLIHNGKPIC-ESQIIVEYVDEAFPDAGESLLPSDPYDRAVAR 103
Query: 370 QWASWSDSELLPASCAWVFPYLGIMQFNKXNVERAKSDLLAALKVLD 510
WA++ + + +P AW LG+ + K A +LAA++ L+
Sbjct: 104 FWAAYINDKFMP---AWQKASLGLTEEEK---AEAVKQMLAAIENLE 144
>10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111
Length = 553
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 521 SHAPSLLPRESHLPMSLSS 577
+H PSL+P ESHL S+SS
Sbjct: 498 NHQPSLVPNESHLNNSVSS 516
>05_03_0629 +
16376575-16376689,16376792-16376839,16376927-16377012,
16377791-16377878,16378387-16378472,16378604-16378690,
16379111-16379293,16379387-16379470,16379590-16379651,
16379752-16379827,16379906-16379968,16380060-16380141,
16380840-16380916,16381502-16381549,16381681-16381743
Length = 415
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 483 PTGRLKSTGRTSSHTHLPCYRENHTCRCHCLQXHCCM 593
P+G + R S +P N RC+CL HC M
Sbjct: 162 PSGAISENERLRSFDAIP----NDVARCNCLNNHCVM 194
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 223 FLKKFPAGKVPAFESADGK 279
FLK P GKVP F DGK
Sbjct: 49 FLKISPEGKVPVFNGGDGK 67
>03_06_0489 -
34284301-34284336,34285104-34285227,34285307-34285371,
34285472-34285555,34285661-34285789,34285887-34285976,
34286116-34286250,34286939-34286984,34287119-34287225,
34287355-34287412,34287524-34287765
Length = 371
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = +2
Query: 557 LPMSLSSXTLLHAFQHVLXPSVXSSLIKXSXLVPDRXPXAASVGV 691
LP SLS LL + H L PS L + L+P P A V V
Sbjct: 16 LPASLSLTLLLASLVHPLPPSAPFLLRLLALLIPSPRPSRAQVVV 60
>02_04_0633 - 24616563-24617279
Length = 238
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 299 MPSLTTLPMKVSAEEIWLPKPVSGSGHHGLTANYC 403
MP+ TT+ M+ S + W P+ G HG+ N+C
Sbjct: 1 MPAATTIQMEASPADHWSPRHRRRCGCHGV--NWC 33
>01_01_0735 + 5730783-5733320
Length = 845
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 183 TEFRIWRDQQVRRLLEEVSCRKSACIRKCRWKGA 284
T F +W D + + +E SC+K C+ C K A
Sbjct: 372 TYFHLWGDSRGAPMTDEESCKKD-CLSNCSCKAA 404
>06_01_0042 + 410061-410544,411401-411837
Length = 306
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 60 PPSLSENSNHGGRGTLHLSGKLPRL 134
PP S + HGGR LSG PR+
Sbjct: 14 PPPASSPARHGGRTAPELSGPTPRV 38
>05_03_0260 - 11200887-11200907,11200979-11201961,11212201-11212390
Length = 397
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +1
Query: 22 HLYGEFLKILPRPPLLFPKTPTMAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFG 201
H++G IL + P +P + G L Y N AY+ + + SG V+V + F
Sbjct: 188 HVFGSKCFILSKRPRSSKFSPKVDEGFLLGYESNAHAYR--VFNKTSGI-VEVTRDVTFD 244
Query: 202 ETNKSE 219
E+N S+
Sbjct: 245 ESNGSQ 250
>04_04_1247 -
32043776-32043880,32044296-32044505,32044595-32045101,
32045362-32045583,32046054-32046184,32046737-32047745,
32047830-32047904,32047995-32048066,32048153-32048328,
32048494-32048646,32048739-32049234
Length = 1051
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 536 RKVRVRRCPSSTFKAASRSDFARSTXCLLNCMIPR*GKTQAQEAGSSSLS 387
+K RVR PSST ++A+RS C + + + A+ SS LS
Sbjct: 425 KKARVRPSPSSTLRSANRSTAGTLVVCPASVLRQWASELAAKVTESSKLS 474
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,470,216
Number of Sequences: 37544
Number of extensions: 448467
Number of successful extensions: 1257
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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