Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_M01
         (858 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81046-2|CAB02824.1|  295|Caenorhabditis elegans Hypothetical pr...    60   3e-09
Z81046-5|CAB02823.1|  225|Caenorhabditis elegans Hypothetical pr...    48   6e-06
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei...    28   7.4  

>Z81046-2|CAB02824.1|  295|Caenorhabditis elegans Hypothetical
           protein C37E2.3 protein.
          Length = 295

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
 Frame = +2

Query: 368 WGLYLIDEDLILPAHIQEVLPNWINHGMHTTIVPFIILELLLNKQKL-SNEKSRIICDTX 544
           WG Y+ D DL++PA + E++P+W+NH  HT ++ FI+L+   +K+   SN  S +I    
Sbjct: 169 WGFYVYDSDLVMPAWVAEIVPSWLNHINHTYLIVFILLDSYYHKRDAPSNSTSWMISVVY 228

Query: 545 Y*FYLXIL 568
             FY  I+
Sbjct: 229 VTFYFIIV 236


>Z81046-5|CAB02823.1|  225|Caenorhabditis elegans Hypothetical
           protein C37E2.2a protein.
          Length = 225

 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 19/45 (42%), Positives = 31/45 (68%)
 Frame = +2

Query: 368 WGLYLIDEDLILPAHIQEVLPNWINHGMHTTIVPFIILELLLNKQ 502
           WGLY I+  L++P  I +++P+W+NH  HT  + FIIL+   +K+
Sbjct: 90  WGLYAINPALVMPDWIAKLIPSWLNHITHTYPIIFIILDSYFHKR 134


>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
           protein.
          Length = 2427

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 445 RDAHNYCTFHHFGASLEQTEIIQREKSDYL 534
           R+   Y T    G  LE  EI+QR+  D+L
Sbjct: 183 REKETYVTAEDMGMDLEHVEILQRKFDDFL 212


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,392,561
Number of Sequences: 27780
Number of extensions: 334223
Number of successful extensions: 831
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)