Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_L24
(915 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.003
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.032
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.23
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.30
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.53
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.70
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.2
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 28 2.1
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.5 bits (83), Expect = 0.003
Identities = 23/61 (37%), Positives = 24/61 (39%)
Frame = +1
Query: 727 LTXSPPPXIPXPXYXPXHXXPPPXPLPVXPPXQPXXXXXPXPXPPXHXXPXXXXTPPXPX 906
L SPPP P P P P P+PV PP P P P PP PP P
Sbjct: 728 LLKSPPPP-PPAVIVPT---PAPAPIPV-PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Query: 907 P 909
P
Sbjct: 783 P 783
Score = 31.1 bits (67), Expect = 0.23
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = +1
Query: 700 PPXXX*LTALTXSPPPXIPXPXYXPXHXXPPPXPLPVXPPXQPXXXXXPXPXPP 861
PP + T +P P IP P P PPP P PP P P PP
Sbjct: 733 PPPPPAVIVPTPAPAP-IPVPPPAPIMGGPPPPP---PPPGVAGAGPPPPPPPP 782
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.9 bits (74), Expect = 0.032
Identities = 27/94 (28%), Positives = 30/94 (31%), Gaps = 6/94 (6%)
Frame = +1
Query: 646 APXXPXXSGK--YXXITXYRPPXXX*LTALTXSPPPXIPXPXYXPXHXXPP-PXPLPVXP 816
AP P SG + PP + + P P P P PP P P P
Sbjct: 1149 APPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP 1208
Query: 817 PXQPXXXXXPXPXPPXHXXPXXXXT---PPXPXP 909
P P P P P P T PP P P
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 29.1 bits (62), Expect = 0.92
Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 8/66 (12%)
Frame = +1
Query: 736 SPPPXIPXPXYX------PXHXXPPPXPLPVXPPXQPXXXXXPXPXPPXHXXPXXXXT-- 891
S PP +P P P P P P + P +P P P P P +
Sbjct: 1061 SAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGA 1120
Query: 892 PPXPXP 909
PP P P
Sbjct: 1121 PPVPKP 1126
Score = 29.1 bits (62), Expect = 0.92
Identities = 20/73 (27%), Positives = 22/73 (30%), Gaps = 3/73 (4%)
Frame = +1
Query: 700 PPXXX*LTALTXSPPPXIPXPXYXPXHXXPP-PXPLPVXPPXQPXXXXXPXPXPPXHXXP 876
PP A P P + P PP P P PP P P P P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Query: 877 XXXXT--PPXPXP 909
+ PP P P
Sbjct: 1152 VPAPSGAPPVPKP 1164
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/69 (26%), Positives = 20/69 (28%), Gaps = 1/69 (1%)
Frame = +1
Query: 700 PPXXX*LTALTXSPPPXIPXPXYXPXHXXPP-PXPLPVXPPXQPXXXXXPXPXPPXHXXP 876
PP + PPP P P PP P P P P P P P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Query: 877 XXXXTPPXP 903
+ P
Sbjct: 1239 VPAPSSEAP 1247
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/61 (27%), Positives = 19/61 (31%), Gaps = 4/61 (6%)
Frame = +1
Query: 739 PPPXIPXPXYXPXHXXPP-PXPLPVXPPXQPXXXXXPXPXPPXHXXPXXXXT---PPXPX 906
P P + P PP P P PP P P P P + PP P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK 1183
Query: 907 P 909
P
Sbjct: 1184 P 1184
Score = 26.2 bits (55), Expect = 6.5
Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 4/74 (5%)
Frame = +1
Query: 700 PPXXX*LTALTXSPPPXIPXPXYXPXHXXPPPXPLPVXPP-XQPXXXXXPXPXP---PXH 867
PP + + P P P P P P P PP +P P P P P
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPV 1123
Query: 868 XXPXXXXTPPXPXP 909
P PP P P
Sbjct: 1124 PKP-SVAAPPVPVP 1136
Score = 26.2 bits (55), Expect = 6.5
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Frame = +1
Query: 742 PPXIPXPXYXPXHXXPP-PXPLPVXPPXQPXXXXXPXPXPPXHXXPXXXXT--PPXPXP 909
P IP P P PP P P PP P P P P + PP P P
Sbjct: 1088 PSGIP-PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +1
Query: 736 SPPPXIPXPXYXPXHXXPPPXPLPVXPPXQPXXXXXPXPXPPXHXXPXXXXTPPXP 903
+P + P P PP P PP P P PP P PP P
Sbjct: 1682 APAHPVSTPPVRPQSAAPPQMSAPT-PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/59 (28%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = +1
Query: 736 SPPPXIPXPXYXPXHXXPPPXPLPVXPPXQPXXXXXPXPXPPXHXXPXXXXT-PPXPXP 909
S PP P P P P P P+ P P P P P + P P P
Sbjct: 1688 STPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.7 bits (66), Expect = 0.30
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 4/64 (6%)
Frame = +1
Query: 730 TXSPP-PXIPXPX---YXPXHXXPPPXPLPVXPPXQPXXXXXPXPXPPXHXXPXXXXTPP 897
T +PP P IP P P PP P + PP QP P P P
Sbjct: 141 TSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPK 200
Query: 898 XPXP 909
P P
Sbjct: 201 VPPP 204
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.53
Identities = 33/131 (25%), Positives = 44/131 (33%), Gaps = 2/131 (1%)
Frame = +2
Query: 524 PRASTEPTARVSTCPLL--TRSIPTSSLTAMSSLKPL**X*LXPPXXPXPXENTXXSPXT 697
P + P A VS P + T P ++ S L PP P P P
Sbjct: 268 PNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPI 327
Query: 698 DHXSAXD*LP*RXPPPPXSXNXVXXHXMXXXHLTPYLSTXPXNXPXXXTPXPXPLNTPXP 877
+ S+ LP PPPP N + + P + P P PL++
Sbjct: 328 GNGSSNSSLP--PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGR-QPPPLSS--S 382
Query: 878 XXXSXPPXPXP 910
S PP P P
Sbjct: 383 RAVSNPPAPPP 393
Score = 27.1 bits (57), Expect = 3.7
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Frame = +1
Query: 724 ALTXSPPPXIPX--PXYXPXHXXPPPXPLPVXPPXQPXXXXXPXPXPPXHXXPXXXXTPP 897
+L S PP +P P P P PLP P P PP P PP
Sbjct: 422 SLPPSAPPSLPPSAPPSLPM-GAPAAPPLPPSAPIAPPLPAGMPAAPP--LPPAAPAPPP 478
Query: 898 XPXP 909
P P
Sbjct: 479 APAP 482
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +3
Query: 798 PPTCXPXPXTXPPXXPPTXXPXTXPXRXXXHXPXPPPL 911
PP P P + PP PP+ P + P P PPL
Sbjct: 415 PPV--PTPPSLPPSAPPS-LPPSAPPSLPMGAPAAPPL 449
Score = 25.8 bits (54), Expect = 8.6
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 745 PXIPXPXYXPXHXXPPPXPLPVXPPXQPXXXXXPXPXPP 861
P +P P P PP P P PP P P PP
Sbjct: 415 PPVPTPPSLPPSA-PPSLP-PSAPPSLPMGAPAAPPLPP 451
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.70
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 772 PXHXXPPPXPLPVXPPXQPXXXXXPXPXPPXHXXPXXXXTP 894
P + PPP P PP QP P P PP + TP
Sbjct: 6 PGNPPPPPPPPGFEPPSQP-----PPPPPPGYVKKRKNKTP 41
Score = 29.1 bits (62), Expect = 0.92
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 736 SPPPXIPXPXYXPXHXXPPPXP 801
+PPP P P + P PPP P
Sbjct: 8 NPPPPPPPPGFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 736 SPPPXIPXPXYXPXHXXPPPXPLPVXPP 819
S PP P P P PP P P PP
Sbjct: 3 SLPPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 4/57 (7%)
Frame = +1
Query: 745 PXIPXPXYXPXHXXP----PPXPLPVXPPXQPXXXXXPXPXPPXHXXPXXXXTPPXP 903
P IP P Y P P PP P P PP P P + PP P
Sbjct: 221 PEIP-PTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPP 276
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +1
Query: 754 PXPXYXPXHXXPPPXPLPVXPPXQPXXXXXPXPXPPXHXXPXXXXTPPXPXP 909
P Y P P P P Q P P PP P T P P
Sbjct: 209 PDDYYSSGRAVSPEIP-PTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMP 259
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +1
Query: 778 HXXPPPXPLPVXPPXQPXXXXXPXPXPPXHXXPXXXXTPPXP 903
H PP P+ QP P P P H P +P P
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRPPPVPQVPSHWYPVSLPSPNLP 176
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,559,280
Number of Sequences: 5004
Number of extensions: 43893
Number of successful extensions: 229
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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