Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_L23
(912 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 187 1e-47
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 36 0.040
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 36 0.053
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 36 0.053
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 36 0.053
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 36 0.053
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 30 2.0
U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical pr... 28 8.1
AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 28 8.1
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 187 bits (455), Expect = 1e-47
Identities = 84/127 (66%), Positives = 104/127 (81%)
Frame = +3
Query: 114 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 293
MSGG AL EEDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEKL+L
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 294 AARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 473
AARA+ A+ENPADV V+S+RP+ QRA+LKFAAHTGAT I GRF+PG TNQIQ F+EPR
Sbjct: 61 AARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPR 120
Query: 474 LLIVLDP 494
LL++ DP
Sbjct: 121 LLVISDP 127
Score = 111 bits (268), Expect = 5e-25
Identities = 49/90 (54%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
Frame = +1
Query: 502 DHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVL 681
DHQ +TEASYV +PVI+ NT+SPL+ +DI +PCN K SIGLMWW+LARE+L LRG +
Sbjct: 130 DHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKI 189
Query: 682 PRDQRW-----DVVVDLXFYRDPEXSEKDE 756
R + +++ DL FYRDP +EK+E
Sbjct: 190 SRQTGFVLEGKEIMPDLYFYRDPTETEKEE 219
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 35.9 bits (79), Expect = 0.040
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 293 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 415
GC CC + C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 35.5 bits (78), Expect = 0.053
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 293 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 415
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 35.5 bits (78), Expect = 0.053
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 293 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 415
GC CC C R T R+ CCT C R C CG
Sbjct: 81 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 35.5 bits (78), Expect = 0.053
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 293 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 415
GC CC C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 35.5 bits (78), Expect = 0.053
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 293 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 415
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +2
Query: 290 SGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGTFHTRCFY*PDPSC 457
S SCC S C+ + +S+C T +C+ +C C T PSC
Sbjct: 38 SSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQ-QQCSNQCNQQCTSITISSGPSC 92
>U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical
protein C25F6.8 protein.
Length = 188
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 556 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 663
CNTD+ R + CNT + +G+ + L+AR ++
Sbjct: 49 CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81
>AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical
protein Y45F3A.8 protein.
Length = 404
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +3
Query: 528 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 635
+C+HS + K CGHC PM +HQ P + D
Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,689,271
Number of Sequences: 27780
Number of extensions: 460850
Number of successful extensions: 1062
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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