Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_L22
(894 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_1017 - 13229717-13229893,13231518-13231748 84 1e-16
07_01_0840 + 6831220-6831438,6831515-6831691 73 2e-13
03_05_0205 - 21965782-21965979,21969169-21969417 71 9e-13
05_04_0108 - 18046813-18046989,18047331-18047423 69 5e-12
11_04_0473 + 18156314-18156388,18157255-18157356,18157714-18157983 44 1e-04
08_02_1499 - 27558872-27559015,27559544-27559666,27560214-275603... 42 7e-04
12_02_0619 - 21276591-21276719,21276798-21276920,21277425-212775... 40 0.002
09_06_0117 - 20953136-20953261,20953621-20953743,20953859-209539... 40 0.002
03_06_0743 - 35906119-35906247,35906747-35906869,35907841-359079... 36 0.043
06_02_0080 + 11518393-11518398,11520318-11520401,11520846-115209... 29 5.0
09_02_0435 - 9384225-9384412,9385084-9385133,9385209-9385274,938... 28 8.7
>03_02_1017 - 13229717-13229893,13231518-13231748
Length = 135
Score = 84.2 bits (199), Expect = 1e-16
Identities = 40/79 (50%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = +2
Query: 308 SKLSVQEIEERVLKVCKAYDKLS-ASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEI 484
S L E+ ER++KV + + K+ +++T D+HF NDLGLDSLD VEV+MA+E+EFGFEI
Sbjct: 51 SFLDKAEVTERIVKVVRNFQKIDDPAKVTPDAHFKNDLGLDSLDAVEVVMALEEEFGFEI 110
Query: 485 PDGDAERLVRPKDIVQYIA 541
PD +A+++ K V +IA
Sbjct: 111 PDNEADKIDSIKVAVDFIA 129
>07_01_0840 + 6831220-6831438,6831515-6831691
Length = 131
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/77 (42%), Positives = 55/77 (71%)
Frame = +2
Query: 314 LSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDG 493
L+ E+ +R+L V K + K+ S+++ ++HF DLGLDSLD VEV+MA+E+EF EIPD
Sbjct: 50 LTRDEVVDRLLDVLKCHPKVDPSKVSPEAHFEKDLGLDSLDTVEVVMAIEEEFKLEIPDQ 109
Query: 494 DAERLVRPKDIVQYIAD 544
+A+++ ++Y+A+
Sbjct: 110 EADKIDSLPLAIEYVAN 126
>03_05_0205 - 21965782-21965979,21969169-21969417
Length = 148
Score = 71.3 bits (167), Expect = 9e-13
Identities = 36/96 (37%), Positives = 53/96 (55%)
Frame = +2
Query: 251 VRPFXNGVPQSHRYSTGVQSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDS 430
V P G+ S G S + RV+++ K +D++ A ++T + F DL LDS
Sbjct: 39 VAPGHRGMAASAGQEGGPPRDFSEGAVRARVVELVKKFDRIDADKVTETADFQRDLSLDS 98
Query: 431 LDHVEVIMAMEDEFGFEIPDGDAERLVRPKDIVQYI 538
LD VE++MA E EF EIPD A++L D+ +YI
Sbjct: 99 LDRVELVMAFEQEFSVEIPDDKADKLSCCADVAKYI 134
>05_04_0108 - 18046813-18046989,18047331-18047423
Length = 89
Score = 68.9 bits (161), Expect = 5e-12
Identities = 30/58 (51%), Positives = 43/58 (74%)
Frame = +2
Query: 368 KLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDAERLVRPKDIVQYIA 541
+L + +T ++HF DLGLDSLD VE++MA E+EFGFEIPD +AE++ K V ++A
Sbjct: 26 RLPDTLVTPNAHFQKDLGLDSLDTVEIVMAFEEEFGFEIPDNEAEKIDSIKTAVDFVA 83
>11_04_0473 + 18156314-18156388,18157255-18157356,18157714-18157983
Length = 148
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 338 RVLKVCKAYDKLSA-SQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDAERLVR 514
+V+++ K L ++L +S F +LG DSLD VE++MA+E+EFG + + +A+ +
Sbjct: 67 KVMQIVKQQLALGEEAKLAPESQF-TELGADSLDTVEIVMALEEEFGITVEEDNAQSITT 125
Query: 515 PKDIVQYI 538
+D I
Sbjct: 126 IQDAADLI 133
>08_02_1499 -
27558872-27559015,27559544-27559666,27560214-27560312,
27561257-27561307
Length = 138
Score = 41.9 bits (94), Expect = 7e-04
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = +2
Query: 332 EERVLKVCKAYDKLSA----SQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDA 499
+E V KVC K A ++++ S F +DLG DSLD VE++M +E+EF + + A
Sbjct: 53 KETVEKVCDIVKKQLAVPEGTEVSGASKF-SDLGADSLDTVEIVMGLEEEFHISVEESSA 111
Query: 500 ERLVRPKDIVQYI 538
+ + +D I
Sbjct: 112 QSIATVEDAAALI 124
>12_02_0619 -
21276591-21276719,21276798-21276920,21277425-21277535,
21277887-21277901,21279117-21279188
Length = 149
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 323 QEIEERVLKVCKAYDKL-SASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDA 499
+E ++V + K L + +T +S F ++LG DSLD VE++M +E+EF + + A
Sbjct: 69 KETVDKVCNIVKTQLALPEGTAVTGESKF-SELGADSLDTVEIVMGLEEEFNITVDETSA 127
Query: 500 ERLVRPKDIVQYI 538
+ + +D I
Sbjct: 128 QDIATVQDAANLI 140
>09_06_0117 -
20953136-20953261,20953621-20953743,20953859-20953957,
20955344-20955403
Length = 135
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = +2
Query: 332 EERVLKVCKAYDKL----SASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDA 499
+E V KVC K + +T S F DLG DSLD VE++M +E+ F + + A
Sbjct: 56 KETVEKVCDIVKKQLVLPEGTDVTGASKF-TDLGADSLDTVEIVMGLEEAFKISVDESSA 114
Query: 500 ERLVRPKDIVQYI 538
+ + +D + I
Sbjct: 115 QSIATVEDAAELI 127
>03_06_0743 -
35906119-35906247,35906747-35906869,35907841-35907954,
35908092-35908148
Length = 140
Score = 35.9 bits (79), Expect = 0.043
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = +2
Query: 314 LSVQEIEERVLKVCKAY-DKLSASQLTV---DSHFMNDLGLDSLDHVEVIMAMEDEFGFE 481
LS ++ + KVC+ ++L+ + T ++ F+ DLG DSLD VE++M +E+ F
Sbjct: 54 LSCSAKQDTIDKVCEIVKNQLAVDEGTAVSGETKFV-DLGADSLDTVEIVMGLEEAFQIT 112
Query: 482 IPDGDAERLVRPKD 523
+ + A+ + +D
Sbjct: 113 VDESSAQVIQTVED 126
>06_02_0080 +
11518393-11518398,11520318-11520401,11520846-11520974,
11521362-11521450,11521589-11521772,11522414-11522504,
11522816-11522970,11523190-11523282,11523473-11523565,
11523715-11523795,11523867-11524016,11524134-11524229,
11524489-11524566
Length = 442
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +2
Query: 317 SVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEI 484
++ ++ ER+L+ CK +K + Q T D+ ++ LG L V+V A+ E G ++
Sbjct: 274 TMDQVRERILQRCKEVEKTAIEQAT-DNAILDQLG--KLVEVDVPRALFQEQGQQL 326
>09_02_0435 -
9384225-9384412,9385084-9385133,9385209-9385274,
9385360-9385451,9385893-9385975,9386181-9386259,
9386888-9387115,9387196-9387297,9387719-9387854,
9387984-9388033,9389391-9389618
Length = 433
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 200 ATVERRHVTDVLYVVDLRNRPPKALRKIFAAAISSSSRN 84
AT + V D ++VVDL ALRK+F ++I + N
Sbjct: 242 ATKDGTGVRDYIHVVDLAEGHIAALRKLFESSIGCQAYN 280
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,601,594
Number of Sequences: 37544
Number of extensions: 293435
Number of successful extensions: 735
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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