Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_L22
         (894 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF087660-1|AAD23566.1|  156|Homo sapiens NADH:ubiquinone oxidore...   121   3e-27
AC002400-1|AAC05814.1|  161|Homo sapiens Acyl carrier protein, M...   121   3e-27
BC058920-1|AAH58920.1|  156|Homo sapiens NADH dehydrogenase (ubi...   118   4e-26
EF036490-1|ABO65076.1|  124|Homo sapiens NADH:ubiquinone oxidore...    78   5e-14
AB065461-1|BAC05720.1|  304|Homo sapiens seven transmembrane hel...    30   9.9  

>AF087660-1|AAD23566.1|  156|Homo sapiens NADH:ubiquinone
           oxidoreductase SDAP subunit protein.
          Length = 156

 Score =  121 bits (292), Expect = 3e-27
 Identities = 55/83 (66%), Positives = 71/83 (85%)
 Frame = +2

Query: 314 LSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDG 493
           L+++ I++RVL V K YDK+   +L+V+SHFM DLGLDSLD VE+IMAMEDEFGFEIPD 
Sbjct: 74  LTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDI 133

Query: 494 DAERLVRPKDIVQYIADKEDIYE 562
           DAE+L+ P++IV YIADK+D+YE
Sbjct: 134 DAEKLMCPQEIVDYIADKKDVYE 156


>AC002400-1|AAC05814.1|  161|Homo sapiens Acyl carrier protein,
           Mitochondrial (ACP) (5'partial) protein.
          Length = 161

 Score =  121 bits (292), Expect = 3e-27
 Identities = 55/83 (66%), Positives = 71/83 (85%)
 Frame = +2

Query: 314 LSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDG 493
           L+++ I++RVL V K YDK+   +L+V+SHFM DLGLDSLD VE+IMAMEDEFGFEIPD 
Sbjct: 79  LTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDI 138

Query: 494 DAERLVRPKDIVQYIADKEDIYE 562
           DAE+L+ P++IV YIADK+D+YE
Sbjct: 139 DAEKLMCPQEIVDYIADKKDVYE 161


>BC058920-1|AAH58920.1|  156|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa protein.
          Length = 156

 Score =  118 bits (283), Expect = 4e-26
 Identities = 54/83 (65%), Positives = 70/83 (84%)
 Frame = +2

Query: 314 LSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDG 493
           L+++ I++RVL V K YDK+   +L+V+SHFM DLGLDSLD VE+IMAMEDEFGFEIP  
Sbjct: 74  LTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPYI 133

Query: 494 DAERLVRPKDIVQYIADKEDIYE 562
           DAE+L+ P++IV YIADK+D+YE
Sbjct: 134 DAEKLMCPQEIVDYIADKKDVYE 156


>EF036490-1|ABO65076.1|  124|Homo sapiens NADH:ubiquinone
           oxidoreductase SDAP subunit protein.
          Length = 124

 Score = 77.8 bits (183), Expect = 5e-14
 Identities = 35/54 (64%), Positives = 45/54 (83%)
 Frame = +2

Query: 314 LSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFG 475
           L+++ I++RVL V K YDK+   +L+V+SHFM DLGLDSLD VE+IMAMEDEFG
Sbjct: 71  LTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFG 124


>AB065461-1|BAC05720.1|  304|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 304

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = -3

Query: 385 LTSTEFVVSLAHFQDSLLDFLNRKLRLHACRVPM*LWYPIXEGPDFCIF 239
           LT   F+V  A  +D LL  ++    L  C     L YP+   P FC+F
Sbjct: 93  LTQMSFLVFFACIEDMLLTVMSYDQFLAICHP---LHYPVIVNPHFCVF 138


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,500,639
Number of Sequences: 237096
Number of extensions: 1645964
Number of successful extensions: 3271
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3271
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)