Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_L17
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0125 - 21039767-21039791,21039876-21039922,21040220-210405...   105   6e-23
03_02_0934 - 12513810-12513834,12513918-12513970,12514212-125145...   105   6e-23
05_07_0333 - 29351372-29351665,29351786-29351928,29352374-293524...    34   0.18 
11_06_0762 + 27043460-27044319,27052096-27052912,27052992-270536...    29   6.8  
01_05_0450 + 22357006-22357323,22357365-22357713,22358175-22358416     29   6.8  

>03_05_0125 -
           21039767-21039791,21039876-21039922,21040220-21040533,
           21040613-21040735,21041599-21041710
          Length = 206

 Score =  105 bits (251), Expect = 6e-23
 Identities = 46/91 (50%), Positives = 60/91 (65%)
 Frame = +3

Query: 201 QNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 380
           QNIRK++KDG +IKKP  +HSR+R R+  EA++KGRH G+GKRRGT  AR+P K LW   
Sbjct: 39  QNIRKLVKDGFIIKKPQKIHSRSRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRR 98

Query: 381 XXXXXXXXXXXXTAKKIDRHLYHSLYHEGXG 473
                        AKKID+H+YH +Y +  G
Sbjct: 99  MRVLRRLLRKYREAKKIDKHMYHDMYMKVKG 129



 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 28/37 (75%), Positives = 33/37 (89%)
 Frame = +2

Query: 86  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNS 196
           M SLKLQKRLA+SV++CGK KVWLDPNE+NEI+  NS
Sbjct: 1   MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANS 37



 Score = 51.6 bits (118), Expect = 8e-07
 Identities = 27/48 (56%), Positives = 30/48 (62%)
 Frame = +1

Query: 460 MKAXGNVFKNKRVLMEYIHRKKAXKAXTXMLSDXAEAPPHKVXEARXR 603
           MK  GN+FKNKRVLME IH+ KA KA    LSD  EA   K   +R R
Sbjct: 125 MKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRER 172


>03_02_0934 -
           12513810-12513834,12513918-12513970,12514212-12514525,
           12514608-12514730,12515710-12515821
          Length = 208

 Score =  105 bits (251), Expect = 6e-23
 Identities = 46/91 (50%), Positives = 60/91 (65%)
 Frame = +3

Query: 201 QNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 380
           QNIRK++KDG +IKKP  +HSR+R R+  EA++KGRH G+GKRRGT  AR+P K LW   
Sbjct: 39  QNIRKLVKDGFIIKKPQKIHSRSRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRR 98

Query: 381 XXXXXXXXXXXXTAKKIDRHLYHSLYHEGXG 473
                        AKKID+H+YH +Y +  G
Sbjct: 99  MRVLRRLLRKYREAKKIDKHMYHDMYMKVKG 129



 Score = 65.3 bits (152), Expect = 6e-11
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = +2

Query: 86  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNS 196
           M SLKLQKRLAASV++CGK KVWLDPNE+NEI+  NS
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANS 37



 Score = 51.6 bits (118), Expect = 8e-07
 Identities = 27/48 (56%), Positives = 30/48 (62%)
 Frame = +1

Query: 460 MKAXGNVFKNKRVLMEYIHRKKAXKAXTXMLSDXAEAPPHKVXEARXR 603
           MK  GN+FKNKRVLME IH+ KA KA    LSD  EA   K   +R R
Sbjct: 125 MKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRER 172


>05_07_0333 -
           29351372-29351665,29351786-29351928,29352374-29352434,
           29352950-29353034,29353254-29353292,29353487-29353557,
           29353640-29353735,29353869-29354017,29354106-29354175,
           29354752-29354792,29354902-29354977
          Length = 374

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = +3

Query: 144 RRCGWIQMKSMRSQTPTPXQNIRKMIKDGLVIKKPVA-VHSRARVRKNTEARRKGRHCGF 320
           RR GW  M +MR Q P P  N   + K     K P+    S ++    + +   GR  G 
Sbjct: 235 RRSGWSDMDAMRRQVPPPAINAGSLAKQ----KSPIGHEQSTSKDAVFSSSTFLGRSSGS 290

Query: 321 GKRRGTANARMPQKE 365
            +R   +++R P  E
Sbjct: 291 SRRPAVSSSREPSTE 305


>11_06_0762 +
           27043460-27044319,27052096-27052912,27052992-27053649,
           27053698-27053934,27054091-27054161,27054346-27054441
          Length = 912

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -1

Query: 501 EHTLVLEHITXRLHGRVSGIDA 436
           E+ L LEH+T RLH +V  ++A
Sbjct: 811 ENLLSLEHVTIRLHDKVHSVEA 832


>01_05_0450 + 22357006-22357323,22357365-22357713,22358175-22358416
          Length = 302

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 228 GLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTA 341
           G+ +K+    H  +    +    R+GRH G+G+RR +A
Sbjct: 212 GITLKEDEKQHGTSSSAADGGGLRRGRHDGWGRRRSSA 249


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,584,527
Number of Sequences: 37544
Number of extensions: 394994
Number of successful extensions: 998
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)