Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_L14
(823 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 68 1e-12
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 34 0.021
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 31 0.15
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 31 0.20
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 29 0.80
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 27 3.2
SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate reductase/... 26 5.6
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 26 7.4
SPCC569.07 |||aromatic aminotransferase |Schizosaccharomyces pom... 26 7.4
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 7.4
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 7.4
SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||M... 25 9.8
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 68.1 bits (159), Expect = 1e-12
Identities = 27/36 (75%), Positives = 34/36 (94%)
Frame = +3
Query: 465 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 572
E+G++S WRGN ANV+RYFPTQALNFAFKDK+K++F
Sbjct: 84 EEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMF 119
Score = 53.2 bits (122), Expect = 4e-08
Identities = 28/53 (52%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +1
Query: 664 FVYPLDFARTRLAXDV--GKGDGXREFSGLXNCIXXXFXSDGLIGLYXXFGVS 816
FVY LD+ARTRLA D K G R+F+GL + + SDGL GLY FG S
Sbjct: 149 FVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPS 201
Score = 42.3 bits (95), Expect = 8e-05
Identities = 24/42 (57%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 332 AVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVR 454
AVSKTA APIERVKLL+Q Q + + RYKGI + F R
Sbjct: 39 AVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKR 80
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 34.3 bits (75), Expect = 0.021
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 468 QGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGR 584
+GL+ F+RGN N +R FP A+ FA + KQ L R
Sbjct: 70 EGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQRALKNR 108
Score = 31.9 bits (69), Expect = 0.11
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 281 PIRSRSLRTSWLAVSPXAVSKTAVAPIERVKLLLQVQH 394
P+ S L + VS+TAV+P+ER+K++ QVQ+
Sbjct: 15 PLLSNDLISMLSGGVAATVSRTAVSPLERMKIIFQVQN 52
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 31.5 bits (68), Expect = 0.15
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 335 VSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI 457
V+K+ VAP++RVK+L Q H S + A R+ G+ A I
Sbjct: 30 VAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHI 69
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 31.1 bits (67), Expect = 0.20
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 667 VYPLDFARTRLAXDVGKGDGXREFSGLXNCIXXXFXSDGLIGLY 798
+YPLD +TR+ VGK D ++G +C+ ++G LY
Sbjct: 26 LYPLDVVKTRMQLSVGKSD----YNGTFDCLKKIVKNEGPHRLY 65
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 29.1 bits (62), Expect = 0.80
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -1
Query: 688 VRSQGGTRSTERXLRRHHRRPDYQRSNARTASSXQRPPRNTCLYLSLK 545
V+S+G +ST + Y S+AR Q R+TC Y S K
Sbjct: 49 VKSEGNNQSTTADVTLTKSPNAYHASSAREEKDLQVSRRDTCFYCSRK 96
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -1
Query: 733 HXGHLPYRHRRQDGYVRSQGGTRSTERXLRRHHRRPDYQRS 611
H P R R +D RS +RS R HR DY RS
Sbjct: 140 HQSRSPVRSRDRD---RSSRSSRSRHPSSRSRHRYDDYSRS 177
>SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate
reductase/acetylglutamate kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 885
Score = 26.2 bits (55), Expect = 5.6
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 428 KGIVDAFVR-IPKGAGSPFILAW*LRQRHQVLPDPGAQLRLQGQVQAGVP 574
+G VDA+V +P G P++ A V+ D A R + Q G+P
Sbjct: 635 EGAVDAWVMALPNGVCKPYVDALTSANGKSVIVDLSADYRFEPSWQYGLP 684
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 346 RRSTHRACQAAAPSTARQQADRRRPALQGYRRRLRPHPQGSR 471
R ++HR + + ++D P LQG ++P P+ SR
Sbjct: 101 RPTSHRHAEEKEVDN-KTKSDETNPVLQGSATEIKPQPRRSR 141
>SPCC569.07 |||aromatic aminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 470
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 616 RSNARTASSXQRPPRNTCLYLSLKAKLSAWV 524
R NA ++ + P++ C Y S KA L WV
Sbjct: 359 RRNALLLAADKHLPKSVCKYHSPKAGLFLWV 389
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 25.8 bits (54), Expect = 7.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 665 SCTPLTSHVPVLPXMSVREMAXVNSPVSETASXXXSXPTV 784
S T T++VP++P A +PVS S PTV
Sbjct: 711 SATSPTTNVPIVPEAVHLSTAFSTAPVSTIVSNISPLPTV 750
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 450 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 343
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
>SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 155
Score = 25.4 bits (53), Expect = 9.8
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 319 GISXRRLQDRRSTHRACQAAAPSTARQQAD-RRRPALQGYRRRLRPHPQGSRV 474
G++ R RR RA Q P+T R A+ R RP RR PQ + V
Sbjct: 19 GMAINRFFVRRRQARAGQ-TKPATTRPMAEARARPGATAVPRRSPTSPQSAYV 70
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,849,238
Number of Sequences: 5004
Number of extensions: 52960
Number of successful extensions: 152
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 402440190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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