Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_L14
(823 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical pr... 80 2e-15
X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP translo... 80 2e-15
U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical pr... 80 2e-15
AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical ... 77 2e-14
Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical pr... 73 3e-13
U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical pr... 64 9e-11
Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical pr... 37 0.020
U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z78542-7|CAB01750.1| 300|Caenorhabditis elegans Hypothetical pr... 33 0.33
Z81577-1|CAB04651.3| 289|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z79755-2|CAB02107.1| 294|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z49068-10|CAA88858.1| 296|Caenorhabditis elegans Hypothetical p... 29 3.0
U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical p... 29 4.0
AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical ... 28 7.0
Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical p... 28 9.3
>Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical
protein T27E9.1a protein.
Length = 300
Score = 79.8 bits (188), Expect = 2e-15
Identities = 39/79 (49%), Positives = 46/79 (58%)
Frame = +1
Query: 580 GVDXKTQFWRYFXXXXXXXXXXXXXXXCFVYPLDFARTRLAXDVGKGDGXREFSGLXNCI 759
G+D K FW++F CFVYPLDFARTRLA D+GK + REF GL +C+
Sbjct: 106 GLDKKKDFWKFFAGNLASGGAAGATSLCFVYPLDFARTRLAADIGKAN-DREFKGLADCL 164
Query: 760 XXXFXSDGLIGLYXXFGVS 816
SDG IGLY F VS
Sbjct: 165 IKIVKSDGPIGLYRGFFVS 183
Score = 73.3 bits (172), Expect = 2e-13
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +2
Query: 332 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKGAG 472
AVSKTAVAPIERVKLLLQVQ SK IA D+RYKGI+D +R+PK G
Sbjct: 24 AVSKTAVAPIERVKLLLQVQDASKAIAVDKRYKGIMDVLIRVPKEQG 70
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +3
Query: 465 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 581
EQG+ + WRGN ANVIRYFPTQA+NFAFKD YK +FL G
Sbjct: 68 EQGVAALWRGNLANVIRYFPTQAMNFAFKDTYKAIFLEG 106
>Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical
protein K01H12.2 protein.
Length = 313
Score = 79.8 bits (188), Expect = 2e-15
Identities = 40/79 (50%), Positives = 46/79 (58%)
Frame = +1
Query: 580 GVDXKTQFWRYFXXXXXXXXXXXXXXXCFVYPLDFARTRLAXDVGKGDGXREFSGLXNCI 759
G+D K FW++F CFVYPLDFARTRLA DVGK + REF GL +C+
Sbjct: 119 GLDKKKDFWKFFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAN-EREFKGLADCL 177
Query: 760 XXXFXSDGLIGLYXXFGVS 816
SDG IGLY F VS
Sbjct: 178 VKIAKSDGPIGLYRGFFVS 196
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/47 (78%), Positives = 39/47 (82%)
Frame = +2
Query: 332 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKGAG 472
AVSKTAVAPIERVKLLLQVQ S IAAD+RYKGIVD VR+PK G
Sbjct: 37 AVSKTAVAPIERVKLLLQVQDASLTIAADKRYKGIVDVLVRVPKEQG 83
Score = 68.1 bits (159), Expect = 7e-12
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = +3
Query: 465 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 581
EQG + WRGN ANVIRYFPTQALNFAFKD YK +F G
Sbjct: 81 EQGYAALWRGNLANVIRYFPTQALNFAFKDTYKNIFQKG 119
>X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP
translocase protein.
Length = 300
Score = 79.8 bits (188), Expect = 2e-15
Identities = 39/79 (49%), Positives = 46/79 (58%)
Frame = +1
Query: 580 GVDXKTQFWRYFXXXXXXXXXXXXXXXCFVYPLDFARTRLAXDVGKGDGXREFSGLXNCI 759
G+D K FW++F CFVYPLDFARTRLA D+GK + REF GL +C+
Sbjct: 106 GLDKKKDFWKFFAGNLASGGAAGATSLCFVYPLDFARTRLAADIGKAN-DREFKGLADCL 164
Query: 760 XXXFXSDGLIGLYXXFGVS 816
SDG IGLY F VS
Sbjct: 165 IKIVKSDGPIGLYRGFFVS 183
Score = 73.3 bits (172), Expect = 2e-13
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +2
Query: 332 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKGAG 472
AVSKTAVAPIERVKLLLQVQ SK IA D+RYKGI+D +R+PK G
Sbjct: 24 AVSKTAVAPIERVKLLLQVQDASKAIAVDKRYKGIMDVLIRVPKEQG 70
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +3
Query: 465 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 581
EQG+ + WRGN ANVIRYFPTQA+NFAFKD YK +FL G
Sbjct: 68 EQGVAALWRGNLANVIRYFPTQAMNFAFKDTYKAIFLEG 106
>U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical
protein T01B11.4 protein.
Length = 313
Score = 79.8 bits (188), Expect = 2e-15
Identities = 40/79 (50%), Positives = 46/79 (58%)
Frame = +1
Query: 580 GVDXKTQFWRYFXXXXXXXXXXXXXXXCFVYPLDFARTRLAXDVGKGDGXREFSGLXNCI 759
G+D K FW++F CFVYPLDFARTRLA DVGK + REF GL +C+
Sbjct: 119 GLDKKKDFWKFFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAN-EREFKGLADCL 177
Query: 760 XXXFXSDGLIGLYXXFGVS 816
SDG IGLY F VS
Sbjct: 178 VKIAKSDGPIGLYRGFFVS 196
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/47 (78%), Positives = 39/47 (82%)
Frame = +2
Query: 332 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKGAG 472
AVSKTAVAPIERVKLLLQVQ S IAAD+RYKGIVD VR+PK G
Sbjct: 37 AVSKTAVAPIERVKLLLQVQDASLTIAADKRYKGIVDVLVRVPKEQG 83
Score = 68.1 bits (159), Expect = 7e-12
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = +3
Query: 465 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 581
EQG + WRGN ANVIRYFPTQALNFAFKD YK +F G
Sbjct: 81 EQGYAALWRGNLANVIRYFPTQALNFAFKDTYKNIFQKG 119
>AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical
protein W02D3.6 protein.
Length = 300
Score = 76.6 bits (180), Expect = 2e-14
Identities = 38/79 (48%), Positives = 43/79 (54%)
Frame = +1
Query: 580 GVDXKTQFWRYFXXXXXXXXXXXXXXXCFVYPLDFARTRLAXDVGKGDGXREFSGLXNCI 759
G+D +FW++F CFVYPLDF RTRL DVGKG REF GL +C
Sbjct: 106 GIDKNKEFWKFFAGNLASGGAAGATSLCFVYPLDFVRTRLGADVGKG-VDREFQGLTDCF 164
Query: 760 XXXFXSDGLIGLYXXFGVS 816
SDG IGLY F VS
Sbjct: 165 VKIVKSDGPIGLYRGFFVS 183
Score = 69.3 bits (162), Expect = 3e-12
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +3
Query: 465 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 581
EQG +FWRGN ANV+RYFPTQALNFAFKD YK++F G
Sbjct: 68 EQGYAAFWRGNLANVLRYFPTQALNFAFKDTYKKMFQEG 106
Score = 68.1 bits (159), Expect = 7e-12
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +2
Query: 332 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKGAG 472
A+SKTAVAPIERVKLLLQV VS+ + AD++YKGI+D R+PK G
Sbjct: 24 AISKTAVAPIERVKLLLQVSDVSETVTADKKYKGIMDVLARVPKEQG 70
>Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical
protein T27E9.1c protein.
Length = 207
Score = 73.3 bits (172), Expect = 2e-13
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +2
Query: 332 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKGAG 472
AVSKTAVAPIERVKLLLQVQ SK IA D+RYKGI+D +R+PK G
Sbjct: 24 AVSKTAVAPIERVKLLLQVQDASKAIAVDKRYKGIMDVLIRVPKEQG 70
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +3
Query: 465 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 581
EQG+ + WRGN ANVIRYFPTQA+NFAFKD YK +FL G
Sbjct: 68 EQGVAALWRGNLANVIRYFPTQAMNFAFKDTYKAIFLEG 106
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/46 (50%), Positives = 27/46 (58%)
Frame = +1
Query: 580 GVDXKTQFWRYFXXXXXXXXXXXXXXXCFVYPLDFARTRLAXDVGK 717
G+D K FW++F CFVYPLDFARTRLA D+GK
Sbjct: 106 GLDKKKDFWKFFAGNLASGGAAGATSLCFVYPLDFARTRLAADIGK 151
>Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical
protein T27E9.1b protein.
Length = 128
Score = 73.3 bits (172), Expect = 2e-13
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +2
Query: 332 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKGAG 472
AVSKTAVAPIERVKLLLQVQ SK IA D+RYKGI+D +R+PK G
Sbjct: 24 AVSKTAVAPIERVKLLLQVQDASKAIAVDKRYKGIMDVLIRVPKEQG 70
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3
Query: 465 EQGLLSFWRGNFANVIRYFPTQ 530
EQG+ + WRGN ANVIRYFPTQ
Sbjct: 68 EQGVAALWRGNLANVIRYFPTQ 89
>Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical
protein C47E12.2 protein.
Length = 306
Score = 72.5 bits (170), Expect = 3e-13
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = +2
Query: 332 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKGAGSPFILAW 493
+VSKT VAPIERVK+LLQVQ+ K I AD+RY GI+DAFVR+PK G F+ W
Sbjct: 33 SVSKTVVAPIERVKILLQVQYSHKDIPADKRYNGIIDAFVRVPKEQG--FVSFW 84
Score = 67.7 bits (158), Expect = 9e-12
Identities = 30/48 (62%), Positives = 34/48 (70%)
Frame = +3
Query: 465 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGR*XEDAVLA 608
EQG +SFWRGN NVIRYFPTQA NFAF D YK + L E+ VL+
Sbjct: 77 EQGFVSFWRGNMTNVIRYFPTQAFNFAFNDLYKSILLKNMKRENNVLS 124
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +1
Query: 661 CFVYPLDFARTRLAXDVGKGDGXREFSGLXNCIXXXFXSDGLIGLYXXFGVS 816
C VYPLDF RTRL+ D+ RE+ GL +C ++G LY F +S
Sbjct: 142 CIVYPLDFIRTRLSADINH-HTKREYKGLVDCTMKTVKNEGFSALYRGFAIS 192
>U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical
protein F25B4.7 protein.
Length = 306
Score = 64.5 bits (150), Expect = 9e-11
Identities = 28/54 (51%), Positives = 40/54 (74%)
Frame = +2
Query: 332 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKGAGSPFILAW 493
A+SKT +AP+ERVKL+LQ+Q+ +A + RYKGIVD F+R+P+ G F+ W
Sbjct: 30 AISKTVIAPVERVKLILQLQNSQTTLALENRYKGIVDCFIRVPREQG--FLSFW 81
Score = 62.1 bits (144), Expect = 5e-10
Identities = 31/73 (42%), Positives = 38/73 (52%)
Frame = +1
Query: 580 GVDXKTQFWRYFXXXXXXXXXXXXXXXCFVYPLDFARTRLAXDVGKGDGXREFSGLXNCI 759
GVD KTQ R+ +YPLDF RTRLA D+GK REF+G+ +C
Sbjct: 112 GVDPKTQHSRWLVGNLVAGGGSGCATLATIYPLDFIRTRLAIDLGKRKSDREFTGMFDCA 171
Query: 760 XXXFXSDGLIGLY 798
SDG+ GLY
Sbjct: 172 KKIIKSDGVPGLY 184
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +3
Query: 465 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 581
EQG LSFWRGN+ N++R ++L +FK+ +++ L G
Sbjct: 74 EQGFLSFWRGNWVNILRSCSQESLGLSFKEFFRKYSLEG 112
>Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical
protein R07E3.4 protein.
Length = 298
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3
Query: 465 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 575
EQG ++ WRGN A V R P LNFAF+D Y+ L
Sbjct: 67 EQGAMALWRGNGAGVARCLPNHTLNFAFRDIYRNTLL 103
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +1
Query: 667 VYPLDFARTRLAXDVGKGDGXREFSGLXNCIXXXFXSDGLIGLY 798
+YP DFARTRLA DV K DG R++ G+ +C+ S+G+ Y
Sbjct: 134 LYPFDFARTRLALDV-KKDGSRKYKGMVDCLKKIKASEGVASWY 176
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +2
Query: 332 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF--VRIPKGA 469
A+SKT AP +RVKL+LQ+Q S+ A+ Y GI D +R+ +GA
Sbjct: 25 AISKTTTAPFDRVKLVLQLQRQSEFAMAE--YNGIRDCISKIRLEQGA 70
>Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical
protein F17E5.2 protein.
Length = 531
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 465 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 566
E G+ SFWRGN NVI+ P A+ F D+ K+
Sbjct: 294 EGGIKSFWRGNGINVIKIAPESAMKFMCYDQIKR 327
>U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical
protein K02F3.2 protein.
Length = 707
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = +2
Query: 332 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKGAGSPFILAW*LRQRH 511
A TAV PI+ VK +Q Q S + YK +D F ++ K G + L Q
Sbjct: 381 ACGATAVYPIDLVKTRMQNQRTSGSFVGEVMYKNSLDCFKKVVKFEGLLGLYRGLLPQIV 440
Query: 512 QVLPDPGAQLRL 547
V P+ +L +
Sbjct: 441 GVAPEKAIKLTM 452
>Z78542-7|CAB01750.1| 300|Caenorhabditis elegans Hypothetical
protein F20D1.9 protein.
Length = 300
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 667 VYPLDFARTRLAXDVGKGDGXREFSGLXNCIXXXFXSDG 783
V+P+D +TRL DG ++SG+ +C + S G
Sbjct: 14 VFPIDLVKTRLQNQTVGADGKLQYSGIADCAKQTWRSGG 52
>Z81577-1|CAB04651.3| 289|Caenorhabditis elegans Hypothetical
protein R11.1 protein.
Length = 289
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 661 CFVYPLDFARTRLAXDVGKGDGXREFSGLXNCIXXXFXSDGLIGLY 798
C +YPLD +TRL +G+ D G+ +C+ ++G+ G Y
Sbjct: 23 CLMYPLDVVKTRL--QLGQQD-----KGMMDCVVKTLKNEGIGGFY 61
>Z79755-2|CAB02107.1| 294|Caenorhabditis elegans Hypothetical
protein F43G9.3 protein.
Length = 294
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 465 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 569
E G + +RGN A + R P ++ FA ++YK++
Sbjct: 65 ENGFFALYRGNSATMARVVPYASMQFAAFEQYKKL 99
>Z49068-10|CAA88858.1| 296|Caenorhabditis elegans Hypothetical
protein K01C8.7a protein.
Length = 296
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +1
Query: 661 CFVYPLDFARTRLAXDVGKGDGXREFSGLXNCIXXXFXSDGLIGLYXXF 807
C P+ +TRL + ++++G+ +C+ +G GLY F
Sbjct: 122 CITNPIWLTKTRLCLQY-ENQQSKKYAGMMDCLKKTVKQEGFFGLYRGF 169
>U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical
protein B0432.4 protein.
Length = 306
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 465 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGR*XEDAV 602
E+G+L+ WRG V+R A A + KQ L +D +
Sbjct: 160 EEGVLTLWRGCTPTVLRAMVVNAAQLATYSQAKQALLASGKVQDGI 205
>AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical
protein Y79H2A.6 protein.
Length = 368
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = -2
Query: 444 ASTIPL*RWSAAICLLTCCTWSSSLTR-SMGATA----VLETAXGDTASQEVLSERD 289
+S +P+ W+ I +TC W+ T+ ++ A++ + E GD S LSE D
Sbjct: 2 SSGVPVLHWNFGIGPITCHAWNKDRTQIAVSASSNDIHIFEWRNGDWQSIHTLSEHD 58
>Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical
protein C54D10.12 protein.
Length = 500
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +3
Query: 153 LQISCSKIRS*CFVIPHPRVPQLPPRXYSPSEDHII 260
+Q S +I++ C ++P+ +PQ+ P +P D I+
Sbjct: 321 IQTSLGRIKAEC-ILPNDEIPQVDPGVLNPEFDQIL 355
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,330,675
Number of Sequences: 27780
Number of extensions: 321041
Number of successful extensions: 876
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -