Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_L13
         (871 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0137 - 12904727-12904981,12907192-12907605                       30   2.8  
01_05_0501 + 22764978-22765896,22766087-22766349,22766613-227668...    29   3.7  
10_07_0020 - 11944054-11944653,11944734-11944847,11944917-119449...    29   6.4  
10_06_0155 + 11306808-11306956,11307157-11307418,11307496-113076...    29   6.4  
01_06_1610 - 38625427-38625726,38625814-38625885,38626001-386261...    29   6.4  
04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785...    28   8.5  
02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230           28   8.5  

>01_03_0137 - 12904727-12904981,12907192-12907605
          Length = 222

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +2

Query: 302 NGTDEAPEDS-PAENGDAEESNDASENGDATEK-KETGVK 415
           NG +E  E++   E GD +E  D  E GD  E+  E G K
Sbjct: 45  NGEEEVEEEAVDGEEGDGDEEGDGEEEGDDEEEDAEEGEK 84


>01_05_0501 +
           22764978-22765896,22766087-22766349,22766613-22766836,
           22767419-22767749,22767968-22768372
          Length = 713

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -3

Query: 428 PQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLG 318
           PQI      L  +W +  + H+  +Q+H  QQANLLG
Sbjct: 461 PQIIELSAGLVHMWRNMYECHQ--VQNHIAQQANLLG 495


>10_07_0020 -
           11944054-11944653,11944734-11944847,11944917-11944976,
           11945154-11945474,11945556-11945594
          Length = 377

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +2

Query: 323 EDSPAENGDAEESNDASENGDATEKKETGVKRKSVA 430
           +D PA +   E++ D  E G+  +KK+T VK+KS A
Sbjct: 99  DDLPALDPSIEQALDEEEIGE--DKKKTAVKKKSAA 132


>10_06_0155 +
           11306808-11306956,11307157-11307418,11307496-11307697,
           11308118-11308353
          Length = 282

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 290 NGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKET 406
           N   NGT+++  D  +EN    E++D   N D  E+ E+
Sbjct: 242 NDHSNGTEDSLRDEESENSKI-ETDDKDSNSDTEEETES 279


>01_06_1610 -
           38625427-38625726,38625814-38625885,38626001-38626117,
           38626509-38626674,38626768-38626815,38626889-38626962,
           38627126-38627243,38627332-38627420,38627512-38627687,
           38627785-38627898,38627981-38628051,38628431-38628477,
           38628581-38628721,38629095-38629136
          Length = 524

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 302 NGTDEAPEDSPAENGDAEESNDASENGDATE 394
           +G + +   SP+ NGDA+E  ++ +N D+ +
Sbjct: 433 SGENNSINPSPSSNGDAKEPTESQDNDDSDD 463


>04_04_1250 +
           32077590-32078000,32078132-32078308,32078437-32078561,
           32078629-32078761,32078866-32079015,32079105-32079158,
           32079437-32079532,32080021-32080095,32080723-32080824,
           32080903-32081589,32081686-32081817,32081916-32082023,
           32082170-32082319
          Length = 799

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 290 NGKENGTDEAPEDSPAENGDAEESNDASE-NGDATEKKE 403
           +G E+ T+E  ED    + D+EE++D  E + D  E+ +
Sbjct: 538 SGDEDDTEELDEDQDISDNDSEENDDELELDSDMDEEND 576


>02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230
          Length = 171

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 299 ENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 409
           E+  ++  +D+  E+   EE ND  E+GD     E G
Sbjct: 81  EDAENQGDDDAGDEDASEEEGNDEDEDGDPEANGEGG 117


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,611,020
Number of Sequences: 37544
Number of extensions: 173339
Number of successful extensions: 601
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)