Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_L12
         (909 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   3.8  
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    23   3.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.7  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 665 TGISSXKGGNTVIHRIR 715
           TG+    G NTVIH+ R
Sbjct: 128 TGVDDILGNNTVIHQPR 144


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 75  LNNQVVKTKCQILRXP 28
           +NNQ+ +T C++L  P
Sbjct: 70  INNQLFQTPCELLNFP 85


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -3

Query: 145 NG-SVLFQLFGQFALNNKRLMGRHFEQSSCQNKVPN 41
           NG SV  QL+GQ  L  ++++G  +E +     VP+
Sbjct: 368 NGDSVNVQLYGQLDLLVRKVLGFGYESNVKYQVVPS 403


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -3

Query: 145 NG-SVLFQLFGQFALNNKRLMGRHFEQSSCQNKVPN 41
           NG SV  QL+GQ  L  ++++G  +E +     VP+
Sbjct: 368 NGDSVNVQLYGQLDLLVRKVLGFGYESNVKYQVVPS 403


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,520
Number of Sequences: 438
Number of extensions: 4047
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)