Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_L07
         (915 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0555 - 34693067-34693196,34693450-34693688,34693956-346940...    28   9.0  

>03_06_0555 -
           34693067-34693196,34693450-34693688,34693956-34694033,
           34694057-34694131,34694667-34694831,34695101-34695151,
           34695250-34695300,34695462-34695533,34695736-34695948,
           34696064-34696214,34696376-34696490,34696665-34696748,
           34696841-34696964,34697064-34697145,34697238-34697299,
           34697787-34697840,34697944-34698147
          Length = 649

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +2

Query: 356 HSWLEAXEKFMXERVGTISVLQHCTTIIYPI 448
           HS LE       ++    SVLQH TT+IYPI
Sbjct: 241 HSLLETISNLGLQKS---SVLQHMTTVIYPI 268


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,923,414
Number of Sequences: 37544
Number of extensions: 314432
Number of successful extensions: 609
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)