Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_K19
         (999 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052130-1|AAK93554.1|  455|Drosophila melanogaster SD08037p pro...    31   3.3  
AE014297-3872|AAF56525.1|  454|Drosophila melanogaster CG5913-PA...    31   3.3  

>AY052130-1|AAK93554.1|  455|Drosophila melanogaster SD08037p
           protein.
          Length = 455

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 16/45 (35%), Positives = 18/45 (40%)
 Frame = -2

Query: 653 PAWVXGRAXXDWGXGXGXAKNSXGMKAXXGRXGXXRXRSGGXGXG 519
           P+W   RA    G G G   N  G +   G  G    R GG G G
Sbjct: 324 PSWQQQRASGPPGGGRGGGGNFRGGRGGGGGGGFGGGRGGGGGGG 368


>AE014297-3872|AAF56525.1|  454|Drosophila melanogaster CG5913-PA
           protein.
          Length = 454

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 16/45 (35%), Positives = 18/45 (40%)
 Frame = -2

Query: 653 PAWVXGRAXXDWGXGXGXAKNSXGMKAXXGRXGXXRXRSGGXGXG 519
           P+W   RA    G G G   N  G +   G  G    R GG G G
Sbjct: 324 PSWQQQRASGPPGGGRGGGGNFRGGRGGGGGGGFGGGRGGGGGGG 368


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,127,865
Number of Sequences: 53049
Number of extensions: 149339
Number of successful extensions: 427
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 5058363141
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)