Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_K18
(1144 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 38 0.011
04_03_0904 + 20717005-20718087 33 0.32
04_03_1022 - 21778315-21779007 32 0.74
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 32 0.97
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 1.7
02_01_0302 - 2021221-2023305 30 3.9
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 26 5.7
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 6.9
07_01_0862 - 7172083-7172931 29 9.1
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 38.3 bits (85), Expect = 0.011
Identities = 29/107 (27%), Positives = 32/107 (29%)
Frame = +3
Query: 648 PPTPSAGXPXXXXPRHPTPNRXPXXXFXHXPPRXPAHVX*PXXPXFTGLPPXHXXXXXXX 827
PP S+ P PTP+ P H PP P P P T + P H
Sbjct: 55 PPPSSSASTAAPLPAPPTPSPVPEHLHHHPPPPPPVP---PCPPNATHVVPCH-----ED 106
Query: 828 XXXXXXXXXXARSPLPIPXXPXXXPPSRHPXSXHXPLTXSPXXXPLP 968
R P P P P PP P P P P P
Sbjct: 107 DELSGERHCPPRPPPPPPPHPPEDPPPHPPHPPDHPPPPPPCRVPPP 153
>04_03_0904 + 20717005-20718087
Length = 360
Score = 33.5 bits (73), Expect = 0.32
Identities = 29/115 (25%), Positives = 34/115 (29%)
Frame = +3
Query: 639 PARPPTPSAGXPXXXXPRHPTPNRXPXXXFXHXPPRXPAHVX*PXXPXFTGLPPXHXXXX 818
P +PP P P PTP P P P + P P T PP +
Sbjct: 61 PEKPPKEHK--PPAYTPPKPTPT--PPTYTPTPKPTPPPYTPKPTPPAHTPTPPTYTPTP 116
Query: 819 XXXXXXXXXXXXXARSPLPIPXXPXXXPPSRHPXSXHXPLTXSPXXXPLPXXXPT 983
+ P P P P PP+ P P P P P PT
Sbjct: 117 TPPKPTPPTYKPQPK-PTPAPYTPTPTPPTYKPQPKPTP---PPTYKPQPKPTPT 167
Score = 29.9 bits (64), Expect = 3.9
Identities = 27/113 (23%), Positives = 33/113 (29%), Gaps = 3/113 (2%)
Frame = +3
Query: 639 PARPPTPSAGXPXXXXPRH-PTPNRXPXXXFXHXPPRXPA-HVX*PXXPXFTGLPPXHXX 812
P PTP+ P P + P P P + P P + P P + P
Sbjct: 128 PQPKPTPAPYTPTPTPPTYKPQPKPTPPPTYKPQPKPTPTPYTPTPTPPSYK--PQPKPT 185
Query: 813 XXXXXXXXXXXXXXXARSPLPIPXXPXXXPPSRHP-XSXHXPLTXSPXXXPLP 968
P P P P PPS P + P T P P P
Sbjct: 186 PTPYTPTPTPPSYKPQPKPTPTPYTPTPTPPSYKPQPKPNPPPTYKPQPKPNP 238
Score = 29.1 bits (62), Expect = 6.9
Identities = 27/113 (23%), Positives = 30/113 (26%), Gaps = 5/113 (4%)
Frame = +3
Query: 639 PARPPTPSAGXPXXXXPRHPTPNRXPXXXFXHXP----PRXPAHVX*PXX-PXFTGLPPX 803
PA PTP P P+ P P P P P + P P T P
Sbjct: 103 PAHTPTPPTYTPTPTPPKPTPPTYKPQPKPTPAPYTPTPTPPTYKPQPKPTPPPTYKPQP 162
Query: 804 HXXXXXXXXXXXXXXXXXARSPLPIPXXPXXXPPSRHPXSXHXPLTXSPXXXP 962
P P P P PPS P P +P P
Sbjct: 163 KPTPTPYTPTPTPPSYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTPTP 215
>04_03_1022 - 21778315-21779007
Length = 230
Score = 32.3 bits (70), Expect = 0.74
Identities = 28/115 (24%), Positives = 34/115 (29%)
Frame = +3
Query: 636 HPARPPTPSAGXPXXXXPRHPTPNRXPXXXFXHXPPRXPAHVX*PXXPXFTGLPPXHXXX 815
H PP P P P P+ P + H P P H P +PP H
Sbjct: 33 HLLPPPPPPPPPPPYVPPHLLPPSPAPQQWYDHPPNYHPPHTPAPAPAPGPYIPPHH--- 89
Query: 816 XXXXXXXXXXXXXXARSPLPIPXXPXXXPPSRHPXSXHXPLTXSPXXXPLPXXXP 980
A +P P PP P P+T +P P P P
Sbjct: 90 -----PHHHHPPTPAPAPSTTPGGHGGVPPYYPP----PPVTPTPYYYPSPAPPP 135
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 31.9 bits (69), Expect = 0.97
Identities = 27/92 (29%), Positives = 29/92 (31%), Gaps = 3/92 (3%)
Frame = +3
Query: 639 PARPPTPSAGXPXXXXPRHPTPNRXPXXXFXHXPPRXPAH-VX*PXXPXFTGLPPXHXXX 815
PA PP PSA P P P P P PP+ P+ P P T P
Sbjct: 61 PASPPLPSATPPLAASP--PPPPPPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTPPTAPV 118
Query: 816 XXXXXXXXXXXXXXARSPLPIP--XXPXXXPP 905
A SP P P P PP
Sbjct: 119 PAAAPPPTAPSPYSAPSPTPTPTHTQPRPSPP 150
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.1 bits (67), Expect = 1.7
Identities = 29/120 (24%), Positives = 35/120 (29%), Gaps = 7/120 (5%)
Frame = +3
Query: 648 PPTPSAGXPXXXXPRHPT-PNRXPXXXFXHXPPRX--PAHVX*PXXPXFTGLPPXHXXXX 818
PP P G P P +P P + H PP P P P G PP H
Sbjct: 11 PPPPQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQF 70
Query: 819 XXXXXXXXXXXXXARSPL----PIPXXPXXXPPSRHPXSXHXPLTXSPXXXPLPXXXPTR 986
+ P P P S+ P P + P P P PT+
Sbjct: 71 NFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQ 130
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = +3
Query: 645 RPPTPS-AGXPXXXXPRHPTPNRXPXXXFXHXPPRXPAHVX*PXXPXFTGLPPXH 806
+P TPS P P +P+P H PP+ P P + PP H
Sbjct: 477 KPSTPSHPSPPGSTTPSYPSPPSSSTTPSYHSPPQGHTTPSHPSPPSSSTAPPSH 531
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 26.2 bits (55), Expect(2) = 5.7
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +3
Query: 639 PARPPTPSAGXPXXXXPRHPTPNRXPXXXFXHXPPRXPAHVX*PXXPXFTGLPP 800
P +PP A P P P PP P H P P T P
Sbjct: 708 PLQPPARPAQHPHLQPPARPAQQPPRPPVTQPLPPPPPLHQHQPYQPRHTDALP 761
Score = 21.4 bits (43), Expect(2) = 5.7
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 867 PLPIPXXPXXXPP 905
PLP+P P PP
Sbjct: 761 PLPLPLPPPPPPP 773
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.1 bits (62), Expect = 6.9
Identities = 23/113 (20%), Positives = 31/113 (27%)
Frame = +3
Query: 651 PTPSAGXPXXXXPRHPTPNRXPXXXFXHXPPRXPAHVX*PXXPXFTGLPPXHXXXXXXXX 830
P+P+A P P P P+ PP P P + PP
Sbjct: 537 PSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPN 596
Query: 831 XXXXXXXXXARSPLPIPXXPXXXPPSRHPXSXHXPLTXSPXXXPLPXXXPTRI 989
P +P PP P + + P P P P R+
Sbjct: 597 CLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRL 649
>07_01_0862 - 7172083-7172931
Length = 282
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +3
Query: 861 RSPLPIPXXPXXXPPSRHPXSXHXPLTXSPXXXPLPXXXPT 983
+ PLP P P P + PL P PLP PT
Sbjct: 180 KKPLPPPSPPPQPPLPEKENTPLPPLLLPPKKKPLPPPSPT 220
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,441,266
Number of Sequences: 37544
Number of extensions: 192374
Number of successful extensions: 1339
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1279
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3468127212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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