Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_K18
         (1144 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical...    32   0.66 
Z54238-1|CAA90992.2|  281|Caenorhabditis elegans Hypothetical pr...    29   8.1  
U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical pr...    29   8.1  
AC024788-3|AAF60614.2|   98|Caenorhabditis elegans Caenacin (cae...    29   8.1  

>AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical
            protein Y43F8C.20 protein.
          Length = 193

 Score = 32.3 bits (70), Expect = 0.66
 Identities = 37/125 (29%), Positives = 39/125 (31%)
 Frame = -1

Query: 1012 GVGWXRVEIRVGWXWGRGXXXGEXVRGXWXEXGWREGGXXXGCXGMGRGERAXXXXXXXX 833
            G GW R   R G  WG     G    G     G   G    G  G GRG+          
Sbjct: 54   GGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGG 113

Query: 832  GELFGXRGX*XGGRPVXNGXXGXNTCAGXLGGXWXXXLIGXRLGVGWRGXXXWGXPAEGV 653
               +G  G   GG    NG  G     G  GG       G   G  W G    G    G 
Sbjct: 114  N--WGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGP-PGSNGGGDWGGNG--GGGRGGG 168

Query: 652  GGRAG 638
            GGR G
Sbjct: 169  GGRGG 173


>Z54238-1|CAA90992.2|  281|Caenorhabditis elegans Hypothetical
           protein T28C6.1 protein.
          Length = 281

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 33/115 (28%), Positives = 37/115 (32%)
 Frame = -1

Query: 979 GWXWGRGXXXGEXVRGXWXEXGWREGGXXXGCXGMGRGERAXXXXXXXXGELFGXRGX*X 800
           GW    G   G   +G     G  +GG   G  G G  +              G  G   
Sbjct: 181 GWGGQNGGGQGGN-QGGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQGGWGNQG--GQQG 237

Query: 799 GGRPVXNGXXGXNTCAGXLGGXWXXXLIGXRLGVGWRGXXXWGXPAEGVGGRAGW 635
           GGR    G  G     G  GG W     G R G        WG P+ G  GR GW
Sbjct: 238 GGRGGQQGPGGWG--GGGRGGGWGGWGRGSRWG--------WGRPSWGGWGR-GW 281


>U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical
           protein C34D4.11 protein.
          Length = 136

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 28/97 (28%), Positives = 28/97 (28%)
 Frame = -1

Query: 934 GXWXEXGWREGGXXXGCXGMGRGERAXXXXXXXXGELFGXRGX*XGGRPVXNGXXGXNTC 755
           G W   GW  GG   G  G G G               G  G   GG     G  G    
Sbjct: 41  GGWGRPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGG 100

Query: 754 AGXLGGXWXXXLIGXRLGVGWRGXXXWGXPAEGVGGR 644
            G  GG       G   G G  G    G    G GGR
Sbjct: 101 GGGRGGGGG----GRGGGGGGGGGRGGGGGGRGGGGR 133



 Score = 28.7 bits (61), Expect = 8.1
 Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
 Frame = -1

Query: 1012 GVGWXRVEIRVGWXWGRGXXXG-EXVRGXW-XEXGWREGGXXXGCXGMGRGER 860
            G GW R     GW  GRG   G     G W    G   GG   G  G G G R
Sbjct: 52   GPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGR 104


>AC024788-3|AAF60614.2|   98|Caenorhabditis elegans Caenacin
           (caenorhabditis bacteriocin)protein 6 protein.
          Length = 98

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
 Frame = -1

Query: 688 GXXXWGXPAEGVG-GRAGWXXXXRRQGXXGXXG 593
           G   WG P  G G GR GW     R+G  G  G
Sbjct: 58  GGWGWGRPMWGGGWGRRGWGGGWGRRGWGGYGG 90


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,961,379
Number of Sequences: 27780
Number of extensions: 118963
Number of successful extensions: 410
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3099034026
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)