Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_K08
         (863 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0480 + 3616123-3617506,3618033-3618166,3618578-3618818,361...    33   0.22 
01_01_1152 + 9170628-9171899                                           33   0.29 
09_06_0020 - 20267190-20267612,20269086-20269495,20269573-202697...    30   2.7  
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42...    29   4.8  

>07_01_0480 +
           3616123-3617506,3618033-3618166,3618578-3618818,
           3618912-3619120,3619234-3619265,3619363-3619474,
           3619609-3619890
          Length = 797

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +1

Query: 319 LKFLVLAIVPLSFAQNIPKATN--LHNGLTEKIGNFSIELLYHTSNLEQSKGN 471
           ++FL   I+P  FA N+ K TN  L   L  KIG+++I +L  T   E   GN
Sbjct: 610 IQFLHGGIIPGLFANNL-KITNILLDQNLVAKIGSYNIPILSETMKSEGGSGN 661


>01_01_1152 + 9170628-9171899
          Length = 423

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 26/88 (29%), Positives = 43/88 (48%)
 Frame = +1

Query: 469 NLIMSPITVWTVLAVIAEGASGNTRRQINHALRLQAKHTNVTRSEFQKISEWLRVNTNTI 648
           N I+SP++    LA++A+GA G T+R++   L        + RS   ++   LR   NT 
Sbjct: 60  NFIVSPLSFHAALALVADGARGETQRELLGFLG-SPSLAELHRSPTTRLVARLRHLPNT- 117

Query: 649 ELAKINAIIVDKQRLPQQDFHDNAXTYY 732
             +    + VD+ R    +F D A + Y
Sbjct: 118 --SFACGVWVDRGRALTPEFADAAASRY 143


>09_06_0020 -
           20267190-20267612,20269086-20269495,20269573-20269747,
           20270833-20271066,20271164-20271265,20271354-20272091,
           20272204-20272321,20272417-20272667,20272768-20272932
          Length = 871

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 555 IDLPSRIPRRAFSYYRQNSPNGDW 484
           + LP  +P+R F Y R     GDW
Sbjct: 677 VRLPGTLPQRVFDYLRDEQRRGDW 700


>03_01_0049 +
           418957-419040,419599-419796,419918-420040,420172-420209,
           420334-420502,421115-424273,424367-424485,424915-425116
          Length = 1363

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = +1

Query: 463 KGNLIMSPITVWTVLAVIAEGASGNTRRQINHALRLQAKHTNVTRSEFQKISEWLRVNTN 642
           KG L+    T W     I E      R ++NH L ++   ++    E +K +E LRV   
Sbjct: 462 KGPLVKQD-TEWAKQLSIKEDEITMLREKLNHVLNIENLGSDAVYLELEKENELLRVKIQ 520

Query: 643 TIE 651
            +E
Sbjct: 521 ELE 523


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,884,297
Number of Sequences: 37544
Number of extensions: 359636
Number of successful extensions: 810
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)