Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_K07
         (915 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF047659-10|AAC04430.1|  798|Caenorhabditis elegans Hypothetical...    31   0.87 
AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    29   6.1  

>AF047659-10|AAC04430.1|  798|Caenorhabditis elegans Hypothetical
           protein K07H8.10 protein.
          Length = 798

 Score = 31.5 bits (68), Expect = 0.87
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -2

Query: 785 GRXGGTGIPVXRXGXGXREGARGXFPGGKR 696
           GR GG+G      G G R G RG  PGG R
Sbjct: 17  GRGGGSGFTPRGGGGGFRGGDRGRSPGGFR 46


>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 776 GGTGIPVXRXGXGXREGARGXFPGGK 699
           G +G P  R G G R G+R   PGG+
Sbjct: 227 GRSGSPGGRRGHGGRHGSRSGSPGGR 252


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,313,647
Number of Sequences: 27780
Number of extensions: 187833
Number of successful extensions: 421
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 389
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)