Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_K06
(753 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 39 7e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.23
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.23
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 29 0.94
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.6
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 2.2
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 2.2
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.2
SPMIT.07 |atp6||F0-ATPase subunit 6|Schizosaccharomyces pombe|ch... 27 2.9
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.1 bits (87), Expect = 7e-04
Identities = 30/113 (26%), Positives = 32/113 (28%), Gaps = 9/113 (7%)
Frame = +3
Query: 312 PPPXPXXGAXXXX---KKTXPPPQXXFXPXGAPPXGGXLXQKXXPPPPP----XGGXGXX 470
PPP A K+ PPP G PP G PPPPP
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP 352
Query: 471 LP--XLXXXPPPPXXXFPXPPXAXXXXXXXKKXXXXXXPPPPXPXXXPPXXXP 623
LP PPPP P + PPP P P P
Sbjct: 353 LPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 29.9 bits (64), Expect = 0.41
Identities = 23/80 (28%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Frame = +3
Query: 297 PPXFSPPPXPXXGAXXXXKKTXPPPQXXFXPXGAPPXGGXLXQKXXPPPPPXG-GXGXXL 473
PP +PP P + PP P GAP PP P G L
Sbjct: 415 PPVPTPPSLPPSAPP-----SLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPL 469
Query: 474 PXLXXXPPPPXXXFPXPPXA 533
P PPP P P A
Sbjct: 470 PPAAPAPPPAPAPAPAAPVA 489
Score = 27.1 bits (57), Expect = 2.9
Identities = 23/100 (23%), Positives = 27/100 (27%)
Frame = +3
Query: 297 PPXFSPPPXPXXGAXXXXKKTXPPPQXXFXPXGAPPXGGXLXQKXXPPPPPXGGXGXXLP 476
P S PP P + P P PP G + PP P P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMN-P 282
Query: 477 XLXXXPPPPXXXFPXPPXAXXXXXXXKKXXXXXXPPPPXP 596
+ P P PP + PPPP P
Sbjct: 283 AINSTSKP-----PLPPPSSRVSAAALAANKKRPPPPPPP 317
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.7 bits (66), Expect = 0.23
Identities = 32/129 (24%), Positives = 34/129 (26%), Gaps = 1/129 (0%)
Frame = +3
Query: 300 PXFSPPPXPXX-GAXXXXKKTXPPPQXXFXPXGAPPXGGXLXQKXXPPPPPXGGXGXXLP 476
P + PP P GA K + P P GAPP P P G P
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPVP-APSGAPPVPKPSVAAPPVPAPSSGIPPVPKP 1184
Query: 477 XLXXXPPPPXXXFPXPPXAXXXXXXXKKXXXXXXPPPPXPXXXPPXXXPPXXXXPXXXXX 656
P PP P P PP P P PP P P
Sbjct: 1185 AAGVPPVPPPSEAPPVP-----------KPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPT 1233
Query: 657 XXGGXPPPP 683
P P
Sbjct: 1234 AKAPPVPAP 1242
Score = 28.7 bits (61), Expect = 0.94
Identities = 27/124 (21%), Positives = 29/124 (23%)
Frame = +3
Query: 312 PPPXPXXGAXXXXKKTXPPPQXXFXPXGAPPXGGXLXQKXXPPPPPXGGXGXXLPXLXXX 491
P P P A + PP P PP P +P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGA 1082
Query: 492 PPPPXXXFPXPPXAXXXXXXXKKXXXXXXPPPPXPXXXPPXXXPPXXXXPXXXXXXXGGX 671
PP P P PP P P PP P P G
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP---VPVPSGA 1139
Query: 672 PPPP 683
PP P
Sbjct: 1140 PPVP 1143
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 436 PPPPPXGGXGXXXPXXXXPPXPPXXFFXPPPXP 534
P PPP P PP PP P P P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 26.6 bits (56), Expect = 3.8
Identities = 20/72 (27%), Positives = 20/72 (27%), Gaps = 4/72 (5%)
Frame = +1
Query: 436 PPPPPXGGXGXXXPXXXXPPXPPXXFFXPP-PXPXXXXXXXKXXXXXXXXPPP---XPXX 603
P P P G P PP P PP P P K P P P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Query: 604 PPXXXXPPXXXP 639
P PP P
Sbjct: 1144 KPSVAAPPVPAP 1155
Score = 26.2 bits (55), Expect = 5.0
Identities = 18/81 (22%), Positives = 18/81 (22%)
Frame = +1
Query: 436 PPPPPXGGXGXXXPXXXXPPXPPXXFFXPPPXPXXXXXXXKXXXXXXXXPPPXPXXPPXX 615
P P P G P PP P P P P P P PP
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Query: 616 XXPPXXXPXXXXXXXXXXXPP 678
P PP
Sbjct: 1173 APSSGIPPVPKPAAGVPPVPP 1193
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/59 (27%), Positives = 16/59 (27%), Gaps = 1/59 (1%)
Frame = +1
Query: 436 PPPPPXGGXGXXXPXXXXPPXPPXXFFXPP-PXPXXXXXXXKXXXXXXXXPPPXPXXPP 609
P P P G P PP P PP P P P P PP
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.23
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 579 PPPPXPXXXPPXXXPPXXXXPXXXXXXXGGXPPPP 683
PPPP P P P P G PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 30.7 bits (66), Expect = 0.23
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 492 PPPPXXXFPXPPXAXXXXXXXKKXXXXXXPPPPXPXXXPPXXXPPXXXXP 641
PPPP P P A PPPP P PP P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.31
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +1
Query: 427 KXXPPPPPXGGXGXXXPXXXXPPXPPXXFFXPPPXPXXXXXXXKXXXXXXXXPPPXPXXP 606
K PPPPP P P P PPP P PPP P P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP-------PPPGVAGAGPPPPPPPP 782
Query: 607 P 609
P
Sbjct: 783 P 783
Score = 29.1 bits (62), Expect = 0.71
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 397 PPPGGXXXNKKXXPPPPPXGGXGXXXPXXXXPPXPP 504
PPP PPPP G G P PP PP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPP----PPPPP 783
Score = 28.7 bits (61), Expect = 0.94
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 3/41 (7%)
Frame = +1
Query: 388 PXGPPPGGXXXNKKXXPPPPP---XGGXGXXXPXXXXPPXP 501
P PPPG PPPPP GG P P P
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 28.3 bits (60), Expect = 1.2
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = +3
Query: 417 LXQKXXPPPPPXGGXGXXLPXLXXXPPP-PXXXFPXPPXAXXXXXXXKKXXXXXXPPPPX 593
L K PPPPP P PPP P P PP PPPP
Sbjct: 727 LLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGV----AGAGPPPPPPPP 782
Query: 594 P 596
P
Sbjct: 783 P 783
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +3
Query: 516 PXPPXAXXXXXXXKKXXXXXXPPPPXPXXXPPXXXPPXXXXPXXXXXXXGGXPPPP 683
P P +K PPPP P P P GG PPPP
Sbjct: 712 PLLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPP--PAPIMGGPPPPP 765
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = +3
Query: 480 LXXXPPPPXXXFPXPPXAXXXXXXXKKXXXXXXPPPPXPXXXPPXXXPPXXXXP 641
L PPPP P A PPPP P PP P
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 1/47 (2%)
Frame = +3
Query: 312 PPPXPXXGAXXXXKKTXPPPQXXFX-PXGAPPXGGXLXQKXXPPPPP 449
PPP PPP P PP G PPPPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 28.7 bits (61), Expect = 0.94
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 435 PPPPPXGGXGXXLPXLXXXPPPPXXXFPXPPXA 533
PPPPP P + PPP PP A
Sbjct: 908 PPPPPTASMTASAPAIASPPPPKVGETYHPPTA 940
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.9 bits (59), Expect = 1.6
Identities = 20/82 (24%), Positives = 20/82 (24%), Gaps = 3/82 (3%)
Frame = +3
Query: 447 PXGGXGXXLPXLXXXPP---PPXXXFPXPPXAXXXXXXXKKXXXXXXPPPPXPXXXPPXX 617
P P PP PP P P A K PPP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 618 XPPXXXXPXXXXXXXGGXPPPP 683
P P PPPP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.1 bits (57), Expect = 2.9
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 6/56 (10%)
Frame = +3
Query: 297 PPXFS-PPPXPXXGAXXXXK-----KTXPPPQXXFXPXGAPPXGGXLXQKXXPPPP 446
PP S PPP P K + PPP P +PP L P PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/75 (21%), Positives = 19/75 (25%)
Frame = +3
Query: 363 PPPQXXFXPXGAPPXGGXLXQKXXPPPPPXGGXGXXLPXLXXXPPPPXXXFPXPPXAXXX 542
P PQ P + P + PP +P P P PP A
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSL 190
Query: 543 XXXXKKXXXXXXPPP 587
PPP
Sbjct: 191 PSAVPPMPPKVPPPP 205
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 2.2
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 492 PPPPXXXFPXPPXAXXXXXXXKKXXXXXXPPPPXPXXXPPXXXPP 626
PPPP P PP A PPPP P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPS-----APPPPLPASSAPSVPNP 1746
Score = 25.4 bits (53), Expect = 8.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 579 PPPPXPXXXPPXXXPPXXXXPXXXXXXXGGXPPPP 683
PPPP PP PP P PPPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPP-------SAPPPP 1734
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.5 bits (58), Expect = 2.2
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 388 PXGPPPGGXXXNKKXXPPPPP 450
P PPP G + PPPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 3.8
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 579 PPPPXPXXXPPXXXPP 626
PPPP P PP PP
Sbjct: 11 PPPPPPGFEPPSQPPP 26
Score = 26.2 bits (55), Expect = 5.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 439 PPPPXGGXGXXXPXXXXPPXPP 504
PPPP G P PP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.4 bits (53), Expect = 8.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +3
Query: 297 PPXFSPPPXPXXGAXXXXKKTXPPP 371
PP PPP P G + PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 25.4 bits (53), Expect = 8.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 388 PXGPPPGGXXXNKKXXPPPPPXG 456
P PPPG ++ PPPPP G
Sbjct: 11 PPPPPPGFEPPSQP--PPPPPPG 31
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 2.2
Identities = 24/75 (32%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Frame = -2
Query: 608 GGXXGXGGGXXXXXXXFFXXXXXXXGXGGGXKXXXGGXGGXXXXGXXXPXPPXG-GGGGX 432
GG G GGG G GG GG GG P G GGG
Sbjct: 188 GGFGGFGGGSGGPPPG--PGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPG 245
Query: 431 XFLX*XXPPGGGPXG 387
F GGGP G
Sbjct: 246 GFGGGLGGFGGGPGG 260
Score = 27.5 bits (58), Expect = 2.2
Identities = 23/82 (28%), Positives = 23/82 (28%)
Frame = -2
Query: 683 GXGGXXXXXXXXXXXGXXXGGXXXXGGXXGXGGGXXXXXXXFFXXXXXXXGXGGGXKXXX 504
G GG G G GG G GGG G GGG
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG-------PGGFGGGPGGFG 248
Query: 503 GGXGGXXXXGXXXPXPPXGGGG 438
GG GG P G GG
Sbjct: 249 GGLGGFGGGPGGFGGGPGGHGG 270
Score = 25.4 bits (53), Expect = 8.8
Identities = 17/63 (26%), Positives = 18/63 (28%)
Frame = -3
Query: 682 GGGGXPPXXXXXXXGXXXXGGXXXGGXXXGXGGGGXXXXKXFXXXXXXXXAXGGXGKXXX 503
GG G PP G GG G GGG + G G
Sbjct: 195 GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGF 254
Query: 502 GGG 494
GGG
Sbjct: 255 GGG 257
>SPMIT.07 |atp6||F0-ATPase subunit 6|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 257
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 19 SPTXGIPLRILIPFVSYYAK 78
+PT IPL +LI FVSY A+
Sbjct: 158 TPTPLIPLLVLIEFVSYIAR 177
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,817,223
Number of Sequences: 5004
Number of extensions: 31574
Number of successful extensions: 166
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 359287726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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